Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g049750.3.1
CDS Infomation

Dentin sialophosphoprotein (AHRD V3.3 *** B9GTV9_POPTR)
Sequence

ATGGCATTCGAGCTCCCAAGTGATCTGATCCAACAAGCCAAGATCTTGACCCGAACCGAA
GCGGGTCTACCCGACTACCTCCCTGATGACTCATCACTTCCGGCCATGCCTTCTCTTTCC
GCCACCGTCGCCGCCTTCGATCCTTCTCCACCCTATCTCCGCTGTAAGCACTGCCAAGGT
AGGCTTCTCAGAGGGCTCGAGTCCTTGATTTGCATATATTGTGGCCACAAATTGCACCAA
AACCCTGACGTTGCTCCTGAACCCATTTCATTTAAGTCCACTGTGGGCTATCAATGGTTT
CTCCAAGCTCTTCGCCTTGATGGATCGGAGAAGGTTGGAGCAGCTACTGAAAAGAATCAG
GTGAACAAGGGGCCGAGTTCACCTCATGATGAAGTTCTTTTATCTGATTTCCTTGATCTG
AAAATAAGATGGCCAACTGAGCTGGAGACAGACAACACTATCATGACCAAGAAGCTAGAG
CTAAGCAAAAGCTCTTATGATCCGACTGGATTTGACCTGGATAACTTTCTTTCTTTTCCA
AAGAGGGAGAACATATCCAGTGCGCACAAAGAACAGACCGTCACAAGCGATAATATTGGG
TCTGCAGCAAATAAAACAGTTGGAAGCCACGAGGATCTTAGTTTGTTTGAGAATCTCAGA
TCTGCTGAACCAGCCGTGACCTCGTCTACTATCCAAACAAGTGATGACTTTTCTGGATGG
CAAGCAGATTTTCAAGCTGCTGGTTCAGGAGAGCAGAATGTGTCCAACGAATCTATCTCT
CCTCTAAGTTCTGCAATTGGTTCTGGGGTTCAGCATTCCTTTGCAGCGTTTGACACTTAT
ACGAGTTCCACAGTTAGTTCTGGAAACCATGAGGGTTCCAAATCAACTGATGCTTTGGTT
GGCGCAGATATTGATCTTTCTGCTCAGTTAGACACAGTTTTTGGAACCACAGAAGGCCCA
ACAGATGGGAAACTGAAGGACGTTGTAGATGTTCCTCCTGCAGCGAATGACTGGCCAGCA
GTTGACCTATGGGATAGTGCAAATCTGGAAGCATCACAGAAAGCTGGGGAAATTCTTCCA
ATTTCCAGACCCAAGAATGCTGAATTACAAAATAGTTCAGAGGACCCCTCAACTAGCATT
GATTGGTTTCAAGATGACACATGGCAGACTCATAATGCACCTGCACCTAAACACGATTCA
ACAAATGGAGATCTTGATTCGTTTGATGAGTGGAATACTCTTACCTCCTCTGCACCCACC
AAAGATCCATTTGAGAATGTACCTGCACCTGAACTTGATACAACAAATGGTGATCATGAT
TCTTTTGATGAGTGGAATACTTTTGCCACCTCTACACCCAGCAAAGATCCATTTGAGAAT
ATGCTGGCGCAAAGCAACAGTGACAATAACAATGACGCAGAACTAACAAATTTTAGTTCA
AATCTTGAAGATATGGATTTTGGCAGTTTTTCGCAGTCAGATCCTTTTTCAGGTGCACCT
GGCAAAGAAGGTGTTTCTGCGGAAGGGAATGGAGATATTTTGGAAGTTCCTACCATATTC
AGTACCGTTGATACCCCAAGCAAGGTTGGTGACGATGCTGGACATGCTTCAGAGAATGCA
GCCATTCATGCTGAATCAAATCCATTGAAGAATGATATGAATATAGAAAGTATAATGTCA
CAGATGCATGATCTTTCTTTTATGCTCGAGACCAATCTATCCATTCCCTCAAAATCCAAC
ATTTCTTCTCCCAAAGATTGA

Peptide Sequence

PEP ID

Solyc07g049750.3.1
PEP Infomation

Dentin sialophosphoprotein (AHRD V3.3 *** B9GTV9_POPTR)
Sequence

MAFELPSDLIQQAKILTRTEAGLPDYLPDDSSLPAMPSLSATVAAFDPSPPYLRCKHCQG
RLLRGLESLICIYCGHKLHQNPDVAPEPISFKSTVGYQWFLQALRLDGSEKVGAATEKNQ
VNKGPSSPHDEVLLSDFLDLKIRWPTELETDNTIMTKKLELSKSSYDPTGFDLDNFLSFP
KRENISSAHKEQTVTSDNIGSAANKTVGSHEDLSLFENLRSAEPAVTSSTIQTSDDFSGW
QADFQAAGSGEQNVSNESISPLSSAIGSGVQHSFAAFDTYTSSTVSSGNHEGSKSTDALV
GADIDLSAQLDTVFGTTEGPTDGKLKDVVDVPPAANDWPAVDLWDSANLEASQKAGEILP
ISRPKNAELQNSSEDPSTSIDWFQDDTWQTHNAPAPKHDSTNGDLDSFDEWNTLTSSAPT
KDPFENVPAPELDTTNGDHDSFDEWNTFATSTPSKDPFENMLAQSNSDNNNDAELTNFSS
NLEDMDFGSFSQSDPFSGAPGKEGVSAEGNGDILEVPTIFSTVDTPSKVGDDAGHASENA
AIHAESNPLKNDMNIESIMSQMHDLSFMLETNLSIPSKSNISSPKD*

Transcript Sequence

Transcript ID

Solyc07g049750.3.1
Transcript Infomation

Dentin sialophosphoprotein (AHRD V3.3 *** B9GTV9_POPTR)
Sequence

ACGGTTTAGAATTTGGATGGTATTGAAAATGTTTTCAACAATTCTCGAAATAAATAATAA
AAAAAGGTATATTTACATCTGGGAACGGACAGTAGATTTCAGTGAAGAGAACAAAAAAAT
CCTGACTGAACACAACACTCTTTTCAATTTGCTCGACAATGGCATTCGAGCTCCCAAGTG
ATCTGATCCAACAAGCCAAGATCTTGACCCGAACCGAAGCGGGTCTACCCGACTACCTCC
CTGATGACTCATCACTTCCGGCCATGCCTTCTCTTTCCGCCACCGTCGCCGCCTTCGATC
CTTCTCCACCCTATCTCCGCTGTAAGCACTGCCAAGGTAGGCTTCTCAGAGGGCTCGAGT
CCTTGATTTGCATATATTGTGGCCACAAATTGCACCAAAACCCTGACGTTGCTCCTGAAC
CCATTTCATTTAAGTCCACTGTGGGCTATCAATGGTTTCTCCAAGCTCTTCGCCTTGATG
GATCGGAGAAGGTTGGAGCAGCTACTGAAAAGAATCAGGTGAACAAGGGGCCGAGTTCAC
CTCATGATGAAGTTCTTTTATCTGATTTCCTTGATCTGAAAATAAGATGGCCAACTGAGC
TGGAGACAGACAACACTATCATGACCAAGAAGCTAGAGCTAAGCAAAAGCTCTTATGATC
CGACTGGATTTGACCTGGATAACTTTCTTTCTTTTCCAAAGAGGGAGAACATATCCAGTG
CGCACAAAGAACAGACCGTCACAAGCGATAATATTGGGTCTGCAGCAAATAAAACAGTTG
GAAGCCACGAGGATCTTAGTTTGTTTGAGAATCTCAGATCTGCTGAACCAGCCGTGACCT
CGTCTACTATCCAAACAAGTGATGACTTTTCTGGATGGCAAGCAGATTTTCAAGCTGCTG
GTTCAGGAGAGCAGAATGTGTCCAACGAATCTATCTCTCCTCTAAGTTCTGCAATTGGTT
CTGGGGTTCAGCATTCCTTTGCAGCGTTTGACACTTATACGAGTTCCACAGTTAGTTCTG
GAAACCATGAGGGTTCCAAATCAACTGATGCTTTGGTTGGCGCAGATATTGATCTTTCTG
CTCAGTTAGACACAGTTTTTGGAACCACAGAAGGCCCAACAGATGGGAAACTGAAGGACG
TTGTAGATGTTCCTCCTGCAGCGAATGACTGGCCAGCAGTTGACCTATGGGATAGTGCAA
ATCTGGAAGCATCACAGAAAGCTGGGGAAATTCTTCCAATTTCCAGACCCAAGAATGCTG
AATTACAAAATAGTTCAGAGGACCCCTCAACTAGCATTGATTGGTTTCAAGATGACACAT
GGCAGACTCATAATGCACCTGCACCTAAACACGATTCAACAAATGGAGATCTTGATTCGT
TTGATGAGTGGAATACTCTTACCTCCTCTGCACCCACCAAAGATCCATTTGAGAATGTAC
CTGCACCTGAACTTGATACAACAAATGGTGATCATGATTCTTTTGATGAGTGGAATACTT
TTGCCACCTCTACACCCAGCAAAGATCCATTTGAGAATATGCTGGCGCAAAGCAACAGTG
ACAATAACAATGACGCAGAACTAACAAATTTTAGTTCAAATCTTGAAGATATGGATTTTG
GCAGTTTTTCGCAGTCAGATCCTTTTTCAGGTGCACCTGGCAAAGAAGGTGTTTCTGCGG
AAGGGAATGGAGATATTTTGGAAGTTCCTACCATATTCAGTACCGTTGATACCCCAAGCA
AGGTTGGTGACGATGCTGGACATGCTTCAGAGAATGCAGCCATTCATGCTGAATCAAATC
CATTGAAGAATGATATGAATATAGAAAGTATAATGTCACAGATGCATGATCTTTCTTTTA
TGCTCGAGACCAATCTATCCATTCCCTCAAAATCCAACATTTCTTCTCCCAAAGATTGAT
ACATCACTTTGCTCGTGTGGTTTGACTTCAATATTCATGTAATCAAGCTGTACCTGTTCA
TGTATTTTATAATAAGAGAATATGCTTGTTTTTGTAGCTTATTATCTTAAATTTCTTGAA
TGGGTGCAAAGGAGTGACGTTTATCTCCGGATATTTTGTTGTAACTGAAGAAGTAGAAGA
GCTTGTTTTTTTTTTTCTCTCTCTTTGGAGAGGTAGACATGAACTTCCGCACATCCCTTG
AGTATACTTTCTGGTTTGATATGGTATTCTCAATGGACCTCTGTATGGGATGTGTCTAGG
AAAAATATATATAAAAAGCAGATTATGTTCTAACAAAAAA