Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g049590.3.1
CDS Infomation

Ankyrin repeat and BTB/POZ domain protein (AHRD V3.3 *** A0A072UZJ2_MEDTR)
Sequence

ATGTCTGACCTGGATGACATTTTCTTAGATGCCGACGATTTCAAGTCATGTTTACCCTTA
AAGAAAGTCCCATACGGCGACGTTTTTGAAGCTTCAAGGGCCGGAGATGTCGACCGTCTC
AAATACCTATTGGAGTCTGGTGTTAACGTAAATGCTAGGGACCAATGGGATTCAGTCGCC
CTTTATTATGCTTGTCTTGCCGGTCATCTTGATGCTGCCCGAATGTTACTGGAGAGTGGT
GCTATATGTTCTGAACATACTTTTGATGGTGACCGTTGCCATTATGCTGCGCTTAATCTT
AAGGTGAGGAAACTGTTGAAGGCCTTTGAAGCTCGGCCTCCTCCGCTTGGACCTTTGCAA
GGTGCTTTAAGAGATACTTTCTTGGCTTGTTGGGCTAATAAGAAATTTTTCGAACAATCT
GAAGGTCAAGTGCCCATATCAGGTAATTCAGAAAATGGAGGATCCAGCCCCAGCGACTTT
CCTCCGGATGTTGTATTCTACGTGCAGGGTAGGCCTATTGAAGCTCACAGAGTAATCTTG
ACTGCACGGTCGCCTTTCTTCGAACAGAAATTTCAGACTGAGTGGAAGGATAGAAAGGAA
GTACGATTCTCTAAGGAAAAGCTCTCTTATCATGCTCTTTATAGCCTCATCCACTTCTTT
TATTCCGACAGGCTTGATATAGCAGTAGATGACATGGAAGATCTTGTTAGAATTTGCAAA
GTTTGCAAATGCCTGTCACTACAAAAAGTCCTTGAGAAAGAGTTGATTCATCAAAAATAT
GCCGAATACAAAGCACTAAGGGACGTAGATAACTCCCAAAAGCGGTTCATCTTGCAGGGA
ATCTCTCTCCCAGAAGAAGACCGTCTTCCAAATGCTTTGCATAAAATTCTTCAAATTGCT
CTTGTTAATTCCAACAGCGAACAGAACTTGAATCACGATGTAGATGGTCTTATATGTCTT
GTCAGTTCAATGCAGATCAGTGAGTTTGAAGATGATCTTGCAGATGTTTGTGTTAGAGTT
GATAAGAAGATCTTTCGTTGCCATCAAGTGATCTTAGCATCAAGGTCTGAATATTTTAAA
GCGAGGTTGTCACGCATGAAGGATTTTCTTGAAGGGAGAGATTGTTTACCTGATAATGCA
CTTCCATGCATTGAGGAACATGATTTGACTGTTGGAGCTTTTAAGAAGATGATAGAGTAT
ATGTATACTGATGGGTTGAAGGACATTGACCCTGATCAAGCTGAAGAAATGTTTGATGCT
GCTTCAAGGTACCTGTTGTTTCCCCTTAAACGTGTCGTAGCAGATGCACTGCTGCCACAT
TTGGAAATGGTTTCTCCTGCTGAGTTGTGCCATTGGCTGGTATTGTCGGACATGTATGGT
GTTATAAAGATTCGGGAGTATTGTCTAGACGCAATGGCATGTAACTTTGAGACGTTTGCG
GATACCCAAGAGTTTAGGGCAATGCTTTTGACCCTCCCACCACCATCTGGTGATTCTGCA
CTTCGTACAACTGCCCCAAGTGCTCCAGGAGCTGAGATGGGCAGCACAGCTGAAGGAAAC
GTTTTGGATGATCTGCGAGAGAAATGGCTCGAAGCTGAAGCTGCCGAACTCGATGAGAGA
GATGAGAGTGCATTGCTTTTTGACAAGCGCCTTGAGATGCTCATGCAAATTGCAGAACAA
GAAAGAACTGATGGGCTTGAATGTAATATAAGTAGTGAACAAGAATTTATATGA

Peptide Sequence

PEP ID

Solyc07g049590.3.1
PEP Infomation

Ankyrin repeat and BTB/POZ domain protein (AHRD V3.3 *** A0A072UZJ2_MEDTR)
Sequence

MSDLDDIFLDADDFKSCLPLKKVPYGDVFEASRAGDVDRLKYLLESGVNVNARDQWDSVA
LYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQ
GALRDTFLACWANKKFFEQSEGQVPISGNSENGGSSPSDFPPDVVFYVQGRPIEAHRVIL
TARSPFFEQKFQTEWKDRKEVRFSKEKLSYHALYSLIHFFYSDRLDIAVDDMEDLVRICK
VCKCLSLQKVLEKELIHQKYAEYKALRDVDNSQKRFILQGISLPEEDRLPNALHKILQIA
LVNSNSEQNLNHDVDGLICLVSSMQISEFEDDLADVCVRVDKKIFRCHQVILASRSEYFK
ARLSRMKDFLEGRDCLPDNALPCIEEHDLTVGAFKKMIEYMYTDGLKDIDPDQAEEMFDA
ASRYLLFPLKRVVADALLPHLEMVSPAELCHWLVLSDMYGVIKIREYCLDAMACNFETFA
DTQEFRAMLLTLPPPSGDSALRTTAPSAPGAEMGSTAEGNVLDDLREKWLEAEAAELDER
DESALLFDKRLEMLMQIAEQERTDGLECNISSEQEFI*

Transcript Sequence

Transcript ID

Solyc07g049590.3.1
Transcript Infomation

Ankyrin repeat and BTB/POZ domain protein (AHRD V3.3 *** A0A072UZJ2_MEDTR)
Sequence

AGTTTTAAAATAATAGACTAATAAAAGTGAATGTAGCCCGTAAAACTAAGCCCGGCCCAA
AAAAAGGCAAAGGGTGACGTCTCTCGATTTTGCCACTGTTTTTCTTGTCAATCCTTTAGC
TCTGCAACTGAAAACTTGTTCATTTCTCTAGCTTCCATTTTTCTGCACTCCTCAATCTTT
GGAGCTAACGAATTTCTTCAAGATTCAGCAGAATTCAAATACCCAATTCACCCAAAAACT
CCATCACACGAACCAAACAAACTTTTCTTTGCACACTTCAGTTAAATTCCTATGTCTGAC
CTGGATGACATTTTCTTAGATGCCGACGATTTCAAGTCATGTTTACCCTTAAAGAAAGTC
CCATACGGCGACGTTTTTGAAGCTTCAAGGGCCGGAGATGTCGACCGTCTCAAATACCTA
TTGGAGTCTGGTGTTAACGTAAATGCTAGGGACCAATGGGATTCAGTCGCCCTTTATTAT
GCTTGTCTTGCCGGTCATCTTGATGCTGCCCGAATGTTACTGGAGAGTGGTGCTATATGT
TCTGAACATACTTTTGATGGTGACCGTTGCCATTATGCTGCGCTTAATCTTAAGGTGAGG
AAACTGTTGAAGGCCTTTGAAGCTCGGCCTCCTCCGCTTGGACCTTTGCAAGGTGCTTTA
AGAGATACTTTCTTGGCTTGTTGGGCTAATAAGAAATTTTTCGAACAATCTGAAGGTCAA
GTGCCCATATCAGGTAATTCAGAAAATGGAGGATCCAGCCCCAGCGACTTTCCTCCGGAT
GTTGTATTCTACGTGCAGGGTAGGCCTATTGAAGCTCACAGAGTAATCTTGACTGCACGG
TCGCCTTTCTTCGAACAGAAATTTCAGACTGAGTGGAAGGATAGAAAGGAAGTACGATTC
TCTAAGGAAAAGCTCTCTTATCATGCTCTTTATAGCCTCATCCACTTCTTTTATTCCGAC
AGGCTTGATATAGCAGTAGATGACATGGAAGATCTTGTTAGAATTTGCAAAGTTTGCAAA
TGCCTGTCACTACAAAAAGTCCTTGAGAAAGAGTTGATTCATCAAAAATATGCCGAATAC
AAAGCACTAAGGGACGTAGATAACTCCCAAAAGCGGTTCATCTTGCAGGGAATCTCTCTC
CCAGAAGAAGACCGTCTTCCAAATGCTTTGCATAAAATTCTTCAAATTGCTCTTGTTAAT
TCCAACAGCGAACAGAACTTGAATCACGATGTAGATGGTCTTATATGTCTTGTCAGTTCA
ATGCAGATCAGTGAGTTTGAAGATGATCTTGCAGATGTTTGTGTTAGAGTTGATAAGAAG
ATCTTTCGTTGCCATCAAGTGATCTTAGCATCAAGGTCTGAATATTTTAAAGCGAGGTTG
TCACGCATGAAGGATTTTCTTGAAGGGAGAGATTGTTTACCTGATAATGCACTTCCATGC
ATTGAGGAACATGATTTGACTGTTGGAGCTTTTAAGAAGATGATAGAGTATATGTATACT
GATGGGTTGAAGGACATTGACCCTGATCAAGCTGAAGAAATGTTTGATGCTGCTTCAAGG
TACCTGTTGTTTCCCCTTAAACGTGTCGTAGCAGATGCACTGCTGCCACATTTGGAAATG
GTTTCTCCTGCTGAGTTGTGCCATTGGCTGGTATTGTCGGACATGTATGGTGTTATAAAG
ATTCGGGAGTATTGTCTAGACGCAATGGCATGTAACTTTGAGACGTTTGCGGATACCCAA
GAGTTTAGGGCAATGCTTTTGACCCTCCCACCACCATCTGGTGATTCTGCACTTCGTACA
ACTGCCCCAAGTGCTCCAGGAGCTGAGATGGGCAGCACAGCTGAAGGAAACGTTTTGGAT
GATCTGCGAGAGAAATGGCTCGAAGCTGAAGCTGCCGAACTCGATGAGAGAGATGAGAGT
GCATTGCTTTTTGACAAGCGCCTTGAGATGCTCATGCAAATTGCAGAACAAGAAAGAACT
GATGGGCTTGAATGTAATATAAGTAGTGAACAAGAATTTATATGAGTTTTGTTATTTCTT
TTATTTTTTGAATCTTATAAATGTACTATTTTGTTCATGTAGCAAAGCTAATCCTTAAGA
GGAAAATAAAAATGATCTTATATGTGAAGTTCTTGTTACACTTTTGGCAGTTAGAACAGT
TTTTTCTTCTTCTTTTTCTTCACATTATTTTAACTTACTGGCTTGG