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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g049460.3.1
CDS Infomation

laccase
Sequence

ATGAGGCATCAAATTTTCTTGTTATTTGCTTGCACCATAATAGCTATTTTTGCTTCTTGT
TCTTCATACGTTTCAGCTGAAGTTGTTGAGCATTCTTTTCATGTGCAAAACCGTACTATA
ACGAGATTGTGCCGTAGACAAGTAATTACCGCTGTAAATGGAAGTCTTCCTGGTCCGGCC
ATACGTGTAAATGAAGGGGACACCCTTGTTGTTCATGTCTACAACCTTTCACCTTACAAT
CTCACTATTCATTGGCATGGAGTTTTCCAGCTATTAAGTGGGTGGGCTGATGGGCCGGAG
TTTGCGACCCAGTGCCCGATCCGACCCGGACATAGCTACACATACAAGTTTAAAATAACA
GGACAAGAAGGGACTCTATGGTGGCATGCACATGTATCATGGCTTAGAGCCACGGTTCAT
GGTGCACTCATCATTCGACCAAAAAAAGGACACTCTTATCCTTTTCCTAAACCTTATAGA
GAAGTTCCCATCCTCTTAGGAGAATGGTGGAATGCCAATGTTGTGGATGTGGAGAATGCA
GCGCTAGCAACTGGCTCAGCACCTAACAACTCTGATGCTTACACTATTAACGGCTGGCCG
GGCGATCTTTACCCTTGCTCCGTTAATCAAACATACAAGTTGAAGGTGAAACATGGAAAA
ACATATCTCCTTCGTATCATCAACGCTGCGCTCAATAACCAACTCTTTTTCAAAATCGCC
AATCATAAAATGAAAGTTGTCGCGGTTGATGCTGCTTATACTGATCCCTACGTCACGGAC
GTAGTTGTCACCGGGCCGGGCCAGACGACTGACGTCCTCTTGACGGCCGATCAGCTACCG
GCGTCGTACTACATGGCGGCTAACCCCTATGCTAGTGCAGCCGGGGTGCCATTTGACAAC
ACCACAACTAGAGGAATTATAGTGTATGAAGAAGCATTACTAGCATCAACTCCCATAATG
CCAATTTTACCTGCCTTTAATGACACACCAACAGCCCATAAGTTTTTCACCAACATAACT
GGGCTTGTAACTAGCCCATTTTGGAACCCACCATCTCGAAAAGTCGACGAGCACATGTTT
ATTACTATTGGGCTGGGCCTAACTGCTTGTGGAAAATCAAGAAATGCAACATGTGGAGGC
CCAAATGGACAACGATTTTCTGCTAGTATGAACAATGCATCTTTCCAGTTTCCAGACAAG
ATTTCAATGTTGGAGGCATTTTTCTACAATGTTGGTGGAGTTTACACTACTGATTTCCCA
GACAAACCACCATTGAAGTTTGACTATACAAACCCAAATAATAGCATGAATCCTGCTATT
ATAATGACGAAAAAATCGACAAAAGTGAAGAAAATTAAGTTCAATTCCACAGTTGAAATT
GTGTTCCAAAATACTGCTTTGATTGGGATAGAAAATCATCCTATTCACTTGCATGGATTC
AATTTCCATGTATTGGCACAAGGCTTTGGCAATTACAATCCTGCAGTCGATAGGAAAAAA
TTCAACCTTGTCAATCCACAGGAACGTAACACAATTGGCGTTCCAGTTGGAGGATGGGCT
GTTATTAGATTCCGAGCTAACAATCCAGGTGTATGGTTGATGCATTGTCATTTGGATGTT
CACTTGCCTTGGGGTTTAGCAACAGCTTTTGTTGTTGAAAATGGGCCAACATTATCAACT
ACGCTACCTCCTCCTCCACCAGATCTACCTAAATGCTAG

Peptide Sequence

PEP ID

Solyc07g049460.3.1
PEP Infomation

laccase
Sequence

MRHQIFLLFACTIIAIFASCSSYVSAEVVEHSFHVQNRTITRLCRRQVITAVNGSLPGPA
IRVNEGDTLVVHVYNLSPYNLTIHWHGVFQLLSGWADGPEFATQCPIRPGHSYTYKFKIT
GQEGTLWWHAHVSWLRATVHGALIIRPKKGHSYPFPKPYREVPILLGEWWNANVVDVENA
ALATGSAPNNSDAYTINGWPGDLYPCSVNQTYKLKVKHGKTYLLRIINAALNNQLFFKIA
NHKMKVVAVDAAYTDPYVTDVVVTGPGQTTDVLLTADQLPASYYMAANPYASAAGVPFDN
TTTRGIIVYEEALLASTPIMPILPAFNDTPTAHKFFTNITGLVTSPFWNPPSRKVDEHMF
ITIGLGLTACGKSRNATCGGPNGQRFSASMNNASFQFPDKISMLEAFFYNVGGVYTTDFP
DKPPLKFDYTNPNNSMNPAIIMTKKSTKVKKIKFNSTVEIVFQNTALIGIENHPIHLHGF
NFHVLAQGFGNYNPAVDRKKFNLVNPQERNTIGVPVGGWAVIRFRANNPGVWLMHCHLDV
HLPWGLATAFVVENGPTLSTTLPPPPPDLPKC*

Transcript Sequence

Transcript ID

Solyc07g049460.3.1
Transcript Infomation

laccase
Sequence

CTTAATTATAAAAATATAGGTGCCGCCTGTGACTTTCATAGGTGTACAAACTTATTCTTG
TTGTTATATAAAGGCATTCATTTCTGATTTTTCTCTTCATCACTCAATATTCTTTCAAGT
TCTATAGTCTTTACACATTGAATTATTTTATTTAAGAGAAAATGAGGCATCAAATTTTCT
TGTTATTTGCTTGCACCATAATAGCTATTTTTGCTTCTTGTTCTTCATACGTTTCAGCTG
AAGTTGTTGAGCATTCTTTTCATGTGCAAAACCGTACTATAACGAGATTGTGCCGTAGAC
AAGTAATTACCGCTGTAAATGGAAGTCTTCCTGGTCCGGCCATACGTGTAAATGAAGGGG
ACACCCTTGTTGTTCATGTCTACAACCTTTCACCTTACAATCTCACTATTCATTGGCATG
GAGTTTTCCAGCTATTAAGTGGGTGGGCTGATGGGCCGGAGTTTGCGACCCAGTGCCCGA
TCCGACCCGGACATAGCTACACATACAAGTTTAAAATAACAGGACAAGAAGGGACTCTAT
GGTGGCATGCACATGTATCATGGCTTAGAGCCACGGTTCATGGTGCACTCATCATTCGAC
CAAAAAAAGGACACTCTTATCCTTTTCCTAAACCTTATAGAGAAGTTCCCATCCTCTTAG
GAGAATGGTGGAATGCCAATGTTGTGGATGTGGAGAATGCAGCGCTAGCAACTGGCTCAG
CACCTAACAACTCTGATGCTTACACTATTAACGGCTGGCCGGGCGATCTTTACCCTTGCT
CCGTTAATCAAACATACAAGTTGAAGGTGAAACATGGAAAAACATATCTCCTTCGTATCA
TCAACGCTGCGCTCAATAACCAACTCTTTTTCAAAATCGCCAATCATAAAATGAAAGTTG
TCGCGGTTGATGCTGCTTATACTGATCCCTACGTCACGGACGTAGTTGTCACCGGGCCGG
GCCAGACGACTGACGTCCTCTTGACGGCCGATCAGCTACCGGCGTCGTACTACATGGCGG
CTAACCCCTATGCTAGTGCAGCCGGGGTGCCATTTGACAACACCACAACTAGAGGAATTA
TAGTGTATGAAGAAGCATTACTAGCATCAACTCCCATAATGCCAATTTTACCTGCCTTTA
ATGACACACCAACAGCCCATAAGTTTTTCACCAACATAACTGGGCTTGTAACTAGCCCAT
TTTGGAACCCACCATCTCGAAAAGTCGACGAGCACATGTTTATTACTATTGGGCTGGGCC
TAACTGCTTGTGGAAAATCAAGAAATGCAACATGTGGAGGCCCAAATGGACAACGATTTT
CTGCTAGTATGAACAATGCATCTTTCCAGTTTCCAGACAAGATTTCAATGTTGGAGGCAT
TTTTCTACAATGTTGGTGGAGTTTACACTACTGATTTCCCAGACAAACCACCATTGAAGT
TTGACTATACAAACCCAAATAATAGCATGAATCCTGCTATTATAATGACGAAAAAATCGA
CAAAAGTGAAGAAAATTAAGTTCAATTCCACAGTTGAAATTGTGTTCCAAAATACTGCTT
TGATTGGGATAGAAAATCATCCTATTCACTTGCATGGATTCAATTTCCATGTATTGGCAC
AAGGCTTTGGCAATTACAATCCTGCAGTCGATAGGAAAAAATTCAACCTTGTCAATCCAC
AGGAACGTAACACAATTGGCGTTCCAGTTGGAGGATGGGCTGTTATTAGATTCCGAGCTA
ACAATCCAGGTGTATGGTTGATGCATTGTCATTTGGATGTTCACTTGCCTTGGGGTTTAG
CAACAGCTTTTGTTGTTGAAAATGGGCCAACATTATCAACTACGCTACCTCCTCCTCCAC
CAGATCTACCTAAATGCTAG