Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g049390.2.1
CDS Infomation

Armadillo repeat-containing protein (AHRD V3.3 *** G0Y6R0_GOSHI)
Sequence

ATGCATCACACCGCCGAACCACCACCTCAGCAGCCTTCTACGGCTCAAACCCTTGACCAA
ATCAACAAGCTTCTCTCTCATTTACTACCCTTTTCTCTTTCCATTAAGTCTTTTACTTCT
CGCTGGCAGGTGCTTCGGTCGAAGCTTGCTACTGTTAAGTCGCTTTTGACGGAGATTTCT
GATTCTCCTCACTGGTCGGAAAATGAGCTGCTTCCGACATTGCTTCCTAATCTTCTTTCT
ACTTTGGTTCGTGTTCAGACTCTATGTGAGGAATGTTCTGACCCGGAGAAGACTCCGGGT
AAGCTGTTGATGCAGTCGGACCTTGATATGGCTTCTGGGTGGTTGTCTAAGCAGATCCAT
CATCTAGACCTTCTTTGCCGTTCTGGTGTGCTTCGTCAGTCTACTGCTATTGTTCTCTCT
CACCCTTCGTCGAACTCTACCAAAGACGATTTAGTTCTTTATATTAGAGACGTGTTTACT
AGAATTCAGATCGGCGGAGTTGAGTTCAAGAGAAAGGCTTTGGAATCGTTGATTCAGCTG
CTTTCTGAGGATGAAAAATCAGCTGGTCTTGTTGCAAAAGAAGGACAAGTTGGGTACTTG
ATTAATTTACTTGACCTTAATACGGATCCTTCTATACGTGAACAGGCAGTTCTTGCTGTA
TCAATGCTTGTTTCCATGAGCGAACAGGCAAGAAAATGCGTGTTTGAAGAGGGTGCTTTG
GGTCCTTTACTGAGAATCATCGAGTCTGGTTCGGTTACAATGAAGGAAAGAGCTGTCTTG
GCAGTGGAATGCATCACAAATGACCCTGAAAATGCTTGGGCAATCTCAGCTTATGGTGGT
GTCTCTGTACTCCTAGACTTGTGTAAATCTGGTTCGATTGCTGCACAACTTCATGGTGTT
GGGGCTATCAAGAATGTATCCACGAATGAAGATGTTCGAATTGCGTTAGCGGAAGAAGGT
GCGATTCCTGTTCTTTTACAGTTAATGGTTTCAGGCAAACCATCAGCACAAGAAAAGGCA
GCAAATTGCATTGCCATTCTTGCTTCCTCTGGTGAGTATTATCGGGATTTGTTAATTCAA
GAAAAGGGGTTGCAGAGATTGGTTCATTTGCTTCATGAATCATCAAGTTCTGATACATTA
GAATATGTTTTACGGCCCACATTTACTATTCAGTTAGCCGAGCTTATAAAGGGGTCTTTG
GTGAAGCTGATGGAATCAGCTAAACCAGATGGGCTGCAAGAGGTAGCAGCTAATGCTTTA
GTTTCGCTGTTGGCTGTGAAGTCGAATAGGAAGGAATTGGTTAAGGACGAGAAGAGTGTG
ATGAAGTTGGTCCAGATGTTGGATTCCAAGAATGATGCGGTTTCGAAGAAGTTCCCGGTG
GCAGTGGTGGCGGCAATCATGGCAGGAGGGAGCCAGGGTTGTCGGAAGCGGCTAGTGGAG
GCCGGCGCATACGGACATTTGCAGAAGCTGGCGGAGGCGGAGGTTGTGGGGGCTAAGAAG
GCCTTGCAGAGACTCTCAGGCAATAGGCTAAAGAGCATTTTCACAAGGACATGGAGTAAT
TAG

Peptide Sequence

PEP ID

Solyc07g049390.2.1
PEP Infomation

Armadillo repeat-containing protein (AHRD V3.3 *** G0Y6R0_GOSHI)
Sequence

MHHTAEPPPQQPSTAQTLDQINKLLSHLLPFSLSIKSFTSRWQVLRSKLATVKSLLTEIS
DSPHWSENELLPTLLPNLLSTLVRVQTLCEECSDPEKTPGKLLMQSDLDMASGWLSKQIH
HLDLLCRSGVLRQSTAIVLSHPSSNSTKDDLVLYIRDVFTRIQIGGVEFKRKALESLIQL
LSEDEKSAGLVAKEGQVGYLINLLDLNTDPSIREQAVLAVSMLVSMSEQARKCVFEEGAL
GPLLRIIESGSVTMKERAVLAVECITNDPENAWAISAYGGVSVLLDLCKSGSIAAQLHGV
GAIKNVSTNEDVRIALAEEGAIPVLLQLMVSGKPSAQEKAANCIAILASSGEYYRDLLIQ
EKGLQRLVHLLHESSSSDTLEYVLRPTFTIQLAELIKGSLVKLMESAKPDGLQEVAANAL
VSLLAVKSNRKELVKDEKSVMKLVQMLDSKNDAVSKKFPVAVVAAIMAGGSQGCRKRLVE
AGAYGHLQKLAEAEVVGAKKALQRLSGNRLKSIFTRTWSN*

Transcript Sequence

Transcript ID

Solyc07g049390.2.1
Transcript Infomation

Armadillo repeat-containing protein (AHRD V3.3 *** G0Y6R0_GOSHI)
Sequence

GGGGACTAGAAATTATTGACACCCATTTGATTTTCTTGCTAAGAAAATGCATCACACCGC
CGAACCACCACCTCAGCAGCCTTCTACGGCTCAAACCCTTGACCAAATCAACAAGCTTCT
CTCTCATTTACTACCCTTTTCTCTTTCCATTAAGTCTTTTACTTCTCGCTGGCAGGTGCT
TCGGTCGAAGCTTGCTACTGTTAAGTCGCTTTTGACGGAGATTTCTGATTCTCCTCACTG
GTCGGAAAATGAGCTGCTTCCGACATTGCTTCCTAATCTTCTTTCTACTTTGGTTCGTGT
TCAGACTCTATGTGAGGAATGTTCTGACCCGGAGAAGACTCCGGGTAAGCTGTTGATGCA
GTCGGACCTTGATATGGCTTCTGGGTGGTTGTCTAAGCAGATCCATCATCTAGACCTTCT
TTGCCGTTCTGGTGTGCTTCGTCAGTCTACTGCTATTGTTCTCTCTCACCCTTCGTCGAA
CTCTACCAAAGACGATTTAGTTCTTTATATTAGAGACGTGTTTACTAGAATTCAGATCGG
CGGAGTTGAGTTCAAGAGAAAGGCTTTGGAATCGTTGATTCAGCTGCTTTCTGAGGATGA
AAAATCAGCTGGTCTTGTTGCAAAAGAAGGACAAGTTGGGTACTTGATTAATTTACTTGA
CCTTAATACGGATCCTTCTATACGTGAACAGGCAGTTCTTGCTGTATCAATGCTTGTTTC
CATGAGCGAACAGGCAAGAAAATGCGTGTTTGAAGAGGGTGCTTTGGGTCCTTTACTGAG
AATCATCGAGTCTGGTTCGGTTACAATGAAGGAAAGAGCTGTCTTGGCAGTGGAATGCAT
CACAAATGACCCTGAAAATGCTTGGGCAATCTCAGCTTATGGTGGTGTCTCTGTACTCCT
AGACTTGTGTAAATCTGGTTCGATTGCTGCACAACTTCATGGTGTTGGGGCTATCAAGAA
TGTATCCACGAATGAAGATGTTCGAATTGCGTTAGCGGAAGAAGGTGCGATTCCTGTTCT
TTTACAGTTAATGGTTTCAGGCAAACCATCAGCACAAGAAAAGGCAGCAAATTGCATTGC
CATTCTTGCTTCCTCTGGTGAGTATTATCGGGATTTGTTAATTCAAGAAAAGGGGTTGCA
GAGATTGGTTCATTTGCTTCATGAATCATCAAGTTCTGATACATTAGAATATGTTTTACG
GCCCACATTTACTATTCAGTTAGCCGAGCTTATAAAGGGGTCTTTGGTGAAGCTGATGGA
ATCAGCTAAACCAGATGGGCTGCAAGAGGTAGCAGCTAATGCTTTAGTTTCGCTGTTGGC
TGTGAAGTCGAATAGGAAGGAATTGGTTAAGGACGAGAAGAGTGTGATGAAGTTGGTCCA
GATGTTGGATTCCAAGAATGATGCGGTTTCGAAGAAGTTCCCGGTGGCAGTGGTGGCGGC
AATCATGGCAGGAGGGAGCCAGGGTTGTCGGAAGCGGCTAGTGGAGGCCGGCGCATACGG
ACATTTGCAGAAGCTGGCGGAGGCGGAGGTTGTGGGGGCTAAGAAGGCCTTGCAGAGACT
CTCAGGCAATAGGCTAAAGAGCATTTTCACAAGGACATGGAGTAATTAG