Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g049300.3.1
CDS Infomation

Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU)
Sequence

ATGAAGAGTTTTTATTTGCACTATTTTTCTCTTCTTCTTTCATTTTCCACCATTTTTTCT
TCTTCTGCTATAGCTTTTGATTATGCAGATGCTCTTTCCAAGAGTCTCCTTTACTTTGAA
GCTCAAAGATCCGGTCGATTACCTTACAATCAACGCGTCACTTGGCGCGACCATTCTGGT
TTAACTGATGGTTTAGAAGAAGGAGTTGATTTAGTTGGAGGTTACTACGATGCTGGTGAC
CATGTGAAATTTGGTCTACCAATGGCATTTACAGTAACAATGTTGTCATGGAGTGTTATT
GAATATGGTGAAGAGATTTCGTATTCGGGAGAAATTGAACATGCCTTTGAAGCTATCAAA
TGGGGTACTGATTATTTCATCAAAGCACATACTAGTCCAAATGTCTTATGGGCTGAGGTC
GGAGATGGAGATACTGATCATTACTGTTGGCAACGTCCAGAAGATATGACAACTTCTCGT
CGATCATTTAAGATCGACGAGAATAACCCTGGCTCTGACTTAGCCGGGGAGACAGCTGCC
GCGATGGCAGCTGCTTCTATTGTGTTTAGGAAAAGTAATCCGCATTACTCTCACTTACTA
TTGCACCATGCCCAACAGTTATTTGAGTTTGGTGACAAGTACAGAGGAAAGTATGACAAA
AGTGTGGGAGTAGTGAAAAATTATTATGCATCAGTGAGTGGGTACGAAGATGAGTTGTTG
TGGGCAGCATTGTGGTTATACAAAGCCACCGACAAAGAAGATTATTTGGAGTATGTAATT
AACAAGGCAAATTCATTTGGAGGTATTGGTTGGGCTATTACTGAGTTCAGTTGGGATGTT
AAATTTGCTGGTCTACAAATTATTGCTTCTAAGATACTGCAGGAGAAAAAATACAACAAA
CACATTCACATACAAGAACAATATCGTTCAAAAGCCGAACACTACATATGTTCATGTCTC
AACAAAAACAACGGTACTACCAACGTCAATCGTACCCCAGGCGGACTACTATACGTCCGT
CAATGGAACAACATGCAATACGTATCGAACGCGGCCTTCCTCCTCACATTCTACTCGGAT
TTCCTTAGAAAAATCGACAAAAAAATCGTGTGTCATGGAGGAATAGTTGATCATGAAGAA
CTATTCAGTTTTGCTAAATCTCAAGTGGATTACATATTGGGCTCAAACCCAAAAAACATG
AGTTATCTAGTGGGTTTTGGGCCAAATTATCCAAAAAGAGTACACCATAGAGGGGCCTCA
ATTGTGTCTTATAGAGAGAATAAAGGCTTTATTGGATGTACTCAAGGGTATGATTATTGG
TACAACAAAAATGGGCCAAACCCAAATGTTTTAATTGGGGCAATTGTTGGTGGGCCTGAC
AATCAAGATGAATTTAATGATGACAGAGCAAATTATGTGCAAACAGAGGCTTGTACATAT
AATACAGCACCTCTTGTGGGTATTTTTGCTAAGTTTAATTTTTTAAGTGCACCATTAATT
GCATCTTTCTAA

Peptide Sequence

PEP ID

Solyc07g049300.3.1
PEP Infomation

Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU)
Sequence

MKSFYLHYFSLLLSFSTIFSSSAIAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSG
LTDGLEEGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSVIEYGEEISYSGEIEHAFEAIK
WGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRSFKIDENNPGSDLAGETAA
AMAAASIVFRKSNPHYSHLLLHHAQQLFEFGDKYRGKYDKSVGVVKNYYASVSGYEDELL
WAALWLYKATDKEDYLEYVINKANSFGGIGWAITEFSWDVKFAGLQIIASKILQEKKYNK
HIHIQEQYRSKAEHYICSCLNKNNGTTNVNRTPGGLLYVRQWNNMQYVSNAAFLLTFYSD
FLRKIDKKIVCHGGIVDHEELFSFAKSQVDYILGSNPKNMSYLVGFGPNYPKRVHHRGAS
IVSYRENKGFIGCTQGYDYWYNKNGPNPNVLIGAIVGGPDNQDEFNDDRANYVQTEACTY
NTAPLVGIFAKFNFLSAPLIASF*

Transcript Sequence

Transcript ID

Solyc07g049300.3.1
Transcript Infomation

Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU)
Sequence

AAGGAAAGTGACACACTAGGCTATAGACTACACATCTACATATTCCCCTCACTGCACTAA
AAAAACAGAGCACACACTTTTGCTCATAACTTCTCCTTTTTCTTCACTCCTAAAACCTCT
TTAGGAGTGACAGTAGAAGGAGAAACAAGCAAACAAACAAAGAAAAAAAAGATCAATTTC
CATCATCATGAAGAGTTTTTATTTGCACTATTTTTCTCTTCTTCTTTCATTTTCCACCAT
TTTTTCTTCTTCTGCTATAGCTTTTGATTATGCAGATGCTCTTTCCAAGAGTCTCCTTTA
CTTTGAAGCTCAAAGATCCGGTCGATTACCTTACAATCAACGCGTCACTTGGCGCGACCA
TTCTGGTTTAACTGATGGTTTAGAAGAAGGAGTTGATTTAGTTGGAGGTTACTACGATGC
TGGTGACCATGTGAAATTTGGTCTACCAATGGCATTTACAGTAACAATGTTGTCATGGAG
TGTTATTGAATATGGTGAAGAGATTTCGTATTCGGGAGAAATTGAACATGCCTTTGAAGC
TATCAAATGGGGTACTGATTATTTCATCAAAGCACATACTAGTCCAAATGTCTTATGGGC
TGAGGTCGGAGATGGAGATACTGATCATTACTGTTGGCAACGTCCAGAAGATATGACAAC
TTCTCGTCGATCATTTAAGATCGACGAGAATAACCCTGGCTCTGACTTAGCCGGGGAGAC
AGCTGCCGCGATGGCAGCTGCTTCTATTGTGTTTAGGAAAAGTAATCCGCATTACTCTCA
CTTACTATTGCACCATGCCCAACAGTTATTTGAGTTTGGTGACAAGTACAGAGGAAAGTA
TGACAAAAGTGTGGGAGTAGTGAAAAATTATTATGCATCAGTGAGTGGGTACGAAGATGA
GTTGTTGTGGGCAGCATTGTGGTTATACAAAGCCACCGACAAAGAAGATTATTTGGAGTA
TGTAATTAACAAGGCAAATTCATTTGGAGGTATTGGTTGGGCTATTACTGAGTTCAGTTG
GGATGTTAAATTTGCTGGTCTACAAATTATTGCTTCTAAGATACTGCAGGAGAAAAAATA
CAACAAACACATTCACATACAAGAACAATATCGTTCAAAAGCCGAACACTACATATGTTC
ATGTCTCAACAAAAACAACGGTACTACCAACGTCAATCGTACCCCAGGCGGACTACTATA
CGTCCGTCAATGGAACAACATGCAATACGTATCGAACGCGGCCTTCCTCCTCACATTCTA
CTCGGATTTCCTTAGAAAAATCGACAAAAAAATCGTGTGTCATGGAGGAATAGTTGATCA
TGAAGAACTATTCAGTTTTGCTAAATCTCAAGTGGATTACATATTGGGCTCAAACCCAAA
AAACATGAGTTATCTAGTGGGTTTTGGGCCAAATTATCCAAAAAGAGTACACCATAGAGG
GGCCTCAATTGTGTCTTATAGAGAGAATAAAGGCTTTATTGGATGTACTCAAGGGTATGA
TTATTGGTACAACAAAAATGGGCCAAACCCAAATGTTTTAATTGGGGCAATTGTTGGTGG
GCCTGACAATCAAGATGAATTTAATGATGACAGAGCAAATTATGTGCAAACAGAGGCTTG
TACATATAATACAGCACCTCTTGTGGGTATTTTTGCTAAGTTTAATTTTTTAAGTGCACC
ATTAATTGCATCTTTCTAAAATATAAAATAAAATAGTATTACACAAAAAAGTGTTATAGT
TATAGAATATGTTTACTTGTCTACTATTTCTTTTTTTTGGGTTTTGTTATGGTGGCTAAA
TTTGGCAACAGCCTCCATATGATATTATCATACCTTGTGTAATGTAAACCCCAATTGTGC
ATATATGATAATGCAAGTAAGAGGCTTATGTATTAAATCCTTGCATTTTTTTTCTATTAA
ACTAAAAAGGACTT