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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g049260.3.1
CDS Infomation

UBA/UBX domain protein (AHRD V3.3 *** AT4G22150.1)
Sequence

ATGGAAAATCAGGCAAATCTCGCCGCCGACGCACAAAGAGAAGAACTTGTCAACACATTC
TGTGAGATTACTTCTGCTTCTAAACCTGAAGCCCTTTTCTTCCTTGAAAGCCATAACTTC
GATTTGGATGCTGCTGTTTCCACCTTCTTCGAGAACAACACCTTTAACTCCGCCTCTGCT
GCTGCCGTTGATGACGGCGATCAAGCTCCAATCCATGCTTCCGCCGCCACTCATGTTGCT
GCTGCGCAAGGCCGTTCTCCGTCGCGCTCGCGATCTCCTTCTCCACCTCGACCTAGAAAC
CCTCCAACTTCTAGCCGCGGCGCTGCTGGGAGGAGAACTGGTGGAATTCACTCTTTTTCT
GATCTGAATCGTCGTCCTGTTACTGGGTCTGGGAGTGACTCCGATGAGCCTCAAGAGTAT
TATACTGGCGGAGAGAAAAGCGGAATGCTTGTTCAAGATCCATCTAAGGCAAATGATGTG
AACTCAATATTCGATCAAGCTAGACAACATGCAACTGTTGAAGGACCTCCAGCATCATCT
GGCTCTAGAAGCTTTATTGGAACTGCTAGAAGACTTACGGGTGAGACTGTGTCTGCTGCT
CCTCAGCCACCTGAGAGTGTTACTCATACCATCACTTTCTGGACCAATGGGTTCACTATT
GATGATGGACCCTTGCGGAGGTTTGATGATCCAGAAAATGCCCCTTTCTTAGAGAGTATC
CGGAAGTCTGAGTGCCCAAAAGAACTTGAGCCAGAAGACAGGAGGACGTCTGTCCGAGTT
AATCTGACAAGGAGAGAGGAGGACTGCCCTGTACCAGAGAAGCGCCGTGCATTATTTCAG
GGTGTGGGAAGAACTTTAGGTAGCACTAGCAATGCTGAACAAGTAGACTCAACTGCTACT
ATCTCATCATTCACCGCAGCTCCATCCCCATCAGTGGGCCTAGTTGTTGATCAGTCACAG
CCCTCAACCTCAATTCAACTAAGGTTGGCAGATGGTACACGAATGGTTTCTCGGTTTAAC
TACCAACACACAATCAGGGATATTCGAGGGTTTATTGATGCATCAAGGCCTGGTGGGTCA
AGGAATTATCAACTGCAGACAGTGGGCTTTCCTCCCAAACAACTCTCTGATCTGGACCAG
ACGGTAGAGCAAGCTGGCCTAGCCAATTCAGTTGTGATTCAGAAACTTTAG

Peptide Sequence

PEP ID

Solyc07g049260.3.1
PEP Infomation

UBA/UBX domain protein (AHRD V3.3 *** AT4G22150.1)
Sequence

MENQANLAADAQREELVNTFCEITSASKPEALFFLESHNFDLDAAVSTFFENNTFNSASA
AAVDDGDQAPIHASAATHVAAAQGRSPSRSRSPSPPRPRNPPTSSRGAAGRRTGGIHSFS
DLNRRPVTGSGSDSDEPQEYYTGGEKSGMLVQDPSKANDVNSIFDQARQHATVEGPPASS
GSRSFIGTARRLTGETVSAAPQPPESVTHTITFWTNGFTIDDGPLRRFDDPENAPFLESI
RKSECPKELEPEDRRTSVRVNLTRREEDCPVPEKRRALFQGVGRTLGSTSNAEQVDSTAT
ISSFTAAPSPSVGLVVDQSQPSTSIQLRLADGTRMVSRFNYQHTIRDIRGFIDASRPGGS
RNYQLQTVGFPPKQLSDLDQTVEQAGLANSVVIQKL*

Transcript Sequence

Transcript ID

Solyc07g049260.3.1
Transcript Infomation

UBA/UBX domain protein (AHRD V3.3 *** AT4G22150.1)
Sequence

GGACTAGACTCGATGTTGGACTGTATAGAAAATAATAAGCTTTCTAATAAATAAAGGAGG
AAAAAAGAAATGCTGAAAATCTTGGGCGGAAGAAACGAATATATACCAAAACTCTACAGT
CTTACAGCCAAAAAAAAAAAGAAAAAGAGAGGAAGACGAACAAGTATCAGAATTCAGCAA
AAATGGAAAATCAGGCAAATCTCGCCGCCGACGCACAAAGAGAAGAACTTGTCAACACAT
TCTGTGAGATTACTTCTGCTTCTAAACCTGAAGCCCTTTTCTTCCTTGAAAGCCATAACT
TCGATTTGGATGCTGCTGTTTCCACCTTCTTCGAGAACAACACCTTTAACTCCGCCTCTG
CTGCTGCCGTTGATGACGGCGATCAAGCTCCAATCCATGCTTCCGCCGCCACTCATGTTG
CTGCTGCGCAAGGCCGTTCTCCGTCGCGCTCGCGATCTCCTTCTCCACCTCGACCTAGAA
ACCCTCCAACTTCTAGCCGCGGCGCTGCTGGGAGGAGAACTGGTGGAATTCACTCTTTTT
CTGATCTGAATCGTCGTCCTGTTACTGGGTCTGGGAGTGACTCCGATGAGCCTCAAGAGT
ATTATACTGGCGGAGAGAAAAGCGGAATGCTTGTTCAAGATCCATCTAAGGCAAATGATG
TGAACTCAATATTCGATCAAGCTAGACAACATGCAACTGTTGAAGGACCTCCAGCATCAT
CTGGCTCTAGAAGCTTTATTGGAACTGCTAGAAGACTTACGGGTGAGACTGTGTCTGCTG
CTCCTCAGCCACCTGAGAGTGTTACTCATACCATCACTTTCTGGACCAATGGGTTCACTA
TTGATGATGGACCCTTGCGGAGGTTTGATGATCCAGAAAATGCCCCTTTCTTAGAGAGTA
TCCGGAAGTCTGAGTGCCCAAAAGAACTTGAGCCAGAAGACAGGAGGACGTCTGTCCGAG
TTAATCTGACAAGGAGAGAGGAGGACTGCCCTGTACCAGAGAAGCGCCGTGCATTATTTC
AGGGTGTGGGAAGAACTTTAGGTAGCACTAGCAATGCTGAACAAGTAGACTCAACTGCTA
CTATCTCATCATTCACCGCAGCTCCATCCCCATCAGTGGGCCTAGTTGTTGATCAGTCAC
AGCCCTCAACCTCAATTCAACTAAGGTTGGCAGATGGTACACGAATGGTTTCTCGGTTTA
ACTACCAACACACAATCAGGGATATTCGAGGGTTTATTGATGCATCAAGGCCTGGTGGGT
CAAGGAATTATCAACTGCAGACAGTGGGCTTTCCTCCCAAACAACTCTCTGATCTGGACC
AGACGGTAGAGCAAGCTGGCCTAGCCAATTCAGTTGTGATTCAGAAACTTTAGAGGGTTA
CGACTTCTGTGTTATATCTGCTGCAGTTACACCTAGAACCATGCTGATTTCAATGCTATC
TTTAAACTACACATACATTCCTAATCACATAGATAATGTTTCTCTTGGAGCCTACTGATG
GAATTATTTTTTGAAGTTGAGCAACATTCAGAAAGTTCCTTCTATTTTCCATTGTCGTCT
AAAATTTGCTTTTGTATATTTCATG