Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g048120.3.1
CDS Infomation

Ubiquitin fusion degradation 1 (AHRD V3.3 *** A0A0B0MFM6_GOSAR)
Sequence

ATGGATTTTGAACTGAGAAGAGCGAGAGAGAAGCTAGAGCAAGAGCAGAGGGAGAGGAAA
CTCAAGGCTAAATTGAAATTGGACAGAGAGAAGAAAGCAAAACAAGAAGCTATTCGTCAA
CGTGAAGCAATTGAAGCTGTTCAGCGTGCTCGCCGACTTGATGCTGCTGAAGCCCAAGCT
AAGGCAACCCAGCAAATTGAAGAAGAACTGCTAGCTGGACGAGGAGTTGCATTCTCTCGT
GTTTTGGAAGCTGTACCCTATGAGGGTGCTGGAGATAAAATTAAATTGCCACCATCTTGC
TTCACTGAATTGTCTGATCAGGGTGCCTTTGACAAGGGACCTCTACACTTCAGGTTGTCT
GTCGTTCACCAATCCTCTCTTTCGGACTTGAAGGATGCAGAGCAGAATAAGCGGACAACG
CATGCTGGAGTCCTGGAGTTCACTGCAGATGATGGTGTTGTAGGGCTTCCTTCCCATATA
TGGAGTAACTTATATCCTGCAGTCTCGCCAATGGTTCCCATGGTTGAGGTGTGTTATGTC
TGGCTCCAAAAAGGAACTTATGCAAAACTTCAGCCAGTTGAAGCAGGATTTTCTGATATC
CCTAATCACAAGGCAGTTCTTGAAACAAGTCTTCGTCAGCATGCGACGCTTTCAGAAGGC
GATGTACTTACTGTTAATCATGGTGTTCTGACATATCATTTACGTGTTCTTGAACTAAAA
CCTTCTTCGAGTGTGTCTGTTCTAGAAACAGATATAGAGGTTGATGTAATCGGTGCTGAT
CCAACTGCTGAGAGCACAAGTCAGCCTGTATTGCAACCTCTCGAATTGGGCAAGTTAGAT
TCTGGGGTGGTTGCAGAAGGAAGCTATGTATATTACAAGTTCCAAATAGGCGATGATGTC
TGGGGAAAAATATCTTCAGGAGATGCAGAAGTTGAGGTAAAAATAGAATCAGAGAACCAA
GATGGGGATACTGACCTCTATGTTTCCCGACACCCATTACTATTTCCTACACAGCACCAG
CATGGTTGGTCATCTCATGACATCGGTTCAAAAGCTTTGGTCCTTAACTCCAGGGATCTC
GGCCTTGGACCTGGTACTTACAGTATTGGCATCTATGGTTTCAAGGGCACAACCAAGTAC
AAGGTGTCAGTTAGCATACGAGACAAATCTAATTTAAAGATTGGACAGCAAGCCGTATCT
TCCACATTGTCTGCTGATGGAGATACAGTAGAATGCCAAAACTGTAAACATTACATACCT
TCCAGGAGTATAGCACTACATGAAGCTTACTGCAGGAGGCACAATATCATCTGTCAGCAT
ACCGGTTGTGGGGTTGTTCTAAGGAGGGATGAGGTCGAGAACCATGTCCATTGTGAAGAA
TGTGGGCTAGCATTTCAGAAAGAGGAAATTGAGAAGCACAAGAAAGTATTTCACGTCCCA
CTGAATTGCCCTTGTGGAATAGTCCTTGAAAAAGAAAAGATGGTTCAACATCAATCTGTG
GAGTGTCCCTTGAGACTTGTAACATGCCGGTTTTGTGGAGACATGGTCCAAGCAGGGACT
TCAGCAGCAGATGTGAGGGATCGCTTAAGAGGACTTACACAGCACGAGAGTGTTTGTGGA
TCAAGAACCGCCCCTTGTGATTCATGTGGGCGTTCAGTTATGTTGAAGGATATGGACATA
CACCAAGTTGCAGTCCACCAGAAAAATTGA

Peptide Sequence

PEP ID

Solyc07g048120.3.1
PEP Infomation

Ubiquitin fusion degradation 1 (AHRD V3.3 *** A0A0B0MFM6_GOSAR)
Sequence

MDFELRRAREKLEQEQRERKLKAKLKLDREKKAKQEAIRQREAIEAVQRARRLDAAEAQA
KATQQIEEELLAGRGVAFSRVLEAVPYEGAGDKIKLPPSCFTELSDQGAFDKGPLHFRLS
VVHQSSLSDLKDAEQNKRTTHAGVLEFTADDGVVGLPSHIWSNLYPAVSPMVPMVEVCYV
WLQKGTYAKLQPVEAGFSDIPNHKAVLETSLRQHATLSEGDVLTVNHGVLTYHLRVLELK
PSSSVSVLETDIEVDVIGADPTAESTSQPVLQPLELGKLDSGVVAEGSYVYYKFQIGDDV
WGKISSGDAEVEVKIESENQDGDTDLYVSRHPLLFPTQHQHGWSSHDIGSKALVLNSRDL
GLGPGTYSIGIYGFKGTTKYKVSVSIRDKSNLKIGQQAVSSTLSADGDTVECQNCKHYIP
SRSIALHEAYCRRHNIICQHTGCGVVLRRDEVENHVHCEECGLAFQKEEIEKHKKVFHVP
LNCPCGIVLEKEKMVQHQSVECPLRLVTCRFCGDMVQAGTSAADVRDRLRGLTQHESVCG
SRTAPCDSCGRSVMLKDMDIHQVAVHQKN*

Transcript Sequence

Transcript ID

Solyc07g048120.3.1
Transcript Infomation

Ubiquitin fusion degradation 1 (AHRD V3.3 *** A0A0B0MFM6_GOSAR)
Sequence

TATATACATGTATAATCCAACCTTGGACAGATCATTCGTTCAATATATCTGAAATACGTA
ATCCATCGCATTGCAATAGAAGAGGAGAAAAGAGAATTTGTTTGGAAGTTTTGTAGAGCG
AGAAGAATGGATTTTGAACTGAGAAGAGCGAGAGAGAAGCTAGAGCAAGAGCAGAGGGAG
AGGAAACTCAAGGCTAAATTGAAATTGGACAGAGAGAAGAAAGCAAAACAAGAAGCTATT
CGTCAACGTGAAGCAATTGAAGCTGTTCAGCGTGCTCGCCGACTTGATGCTGCTGAAGCC
CAAGCTAAGGCAACCCAGCAAATTGAAGAAGAACTGCTAGCTGGACGAGGAGTTGCATTC
TCTCGTGTTTTGGAAGCTGTACCCTATGAGGGTGCTGGAGATAAAATTAAATTGCCACCA
TCTTGCTTCACTGAATTGTCTGATCAGGGTGCCTTTGACAAGGGACCTCTACACTTCAGG
TTGTCTGTCGTTCACCAATCCTCTCTTTCGGACTTGAAGGATGCAGAGCAGAATAAGCGG
ACAACGCATGCTGGAGTCCTGGAGTTCACTGCAGATGATGGTGTTGTAGGGCTTCCTTCC
CATATATGGAGTAACTTATATCCTGCAGTCTCGCCAATGGTTCCCATGGTTGAGGTGTGT
TATGTCTGGCTCCAAAAAGGAACTTATGCAAAACTTCAGCCAGTTGAAGCAGGATTTTCT
GATATCCCTAATCACAAGGCAGTTCTTGAAACAAGTCTTCGTCAGCATGCGACGCTTTCA
GAAGGCGATGTACTTACTGTTAATCATGGTGTTCTGACATATCATTTACGTGTTCTTGAA
CTAAAACCTTCTTCGAGTGTGTCTGTTCTAGAAACAGATATAGAGGTTGATGTAATCGGT
GCTGATCCAACTGCTGAGAGCACAAGTCAGCCTGTATTGCAACCTCTCGAATTGGGCAAG
TTAGATTCTGGGGTGGTTGCAGAAGGAAGCTATGTATATTACAAGTTCCAAATAGGCGAT
GATGTCTGGGGAAAAATATCTTCAGGAGATGCAGAAGTTGAGGTAAAAATAGAATCAGAG
AACCAAGATGGGGATACTGACCTCTATGTTTCCCGACACCCATTACTATTTCCTACACAG
CACCAGCATGGTTGGTCATCTCATGACATCGGTTCAAAAGCTTTGGTCCTTAACTCCAGG
GATCTCGGCCTTGGACCTGGTACTTACAGTATTGGCATCTATGGTTTCAAGGGCACAACC
AAGTACAAGGTGTCAGTTAGCATACGAGACAAATCTAATTTAAAGATTGGACAGCAAGCC
GTATCTTCCACATTGTCTGCTGATGGAGATACAGTAGAATGCCAAAACTGTAAACATTAC
ATACCTTCCAGGAGTATAGCACTACATGAAGCTTACTGCAGGAGGCACAATATCATCTGT
CAGCATACCGGTTGTGGGGTTGTTCTAAGGAGGGATGAGGTCGAGAACCATGTCCATTGT
GAAGAATGTGGGCTAGCATTTCAGAAAGAGGAAATTGAGAAGCACAAGAAAGTATTTCAC
GTCCCACTGAATTGCCCTTGTGGAATAGTCCTTGAAAAAGAAAAGATGGTTCAACATCAA
TCTGTGGAGTGTCCCTTGAGACTTGTAACATGCCGGTTTTGTGGAGACATGGTCCAAGCA
GGGACTTCAGCAGCAGATGTGAGGGATCGCTTAAGAGGACTTACACAGCACGAGAGTGTT
TGTGGATCAAGAACCGCCCCTTGTGATTCATGTGGGCGTTCAGTTATGTTGAAGGATATG
GACATACACCAAGTTGCAGTCCACCAGAAAAATTGATCATGAGTAAATCTTTTATTTCTT
CTCTGGTGACTTTGGATATAAAATGCTGGTTGAACTGTAAAAACCGACTGTTGATTCATG
TATTCATGCAGTTGTATATTTTCGTCTTTATTTTTCATTCTCAACCACTTTAAGGGTTGC
AAGGGGAGGGGTGGATTGATGATTTCTAGCTCCCTTTGCTGTGACTTTGAAAATATTATC
GATTGTCATCAATGCTTAGTACCTTGTATGTATAGATCTGTGCAACACAACTCCGCATAT
AACTTGACGATTTTTGCTGTAAGCATTTCTCTAATCAGTATTTGGTGGAATCGGGTGCAC
CATTTGCTTGAGGAGGGTGAACACATGCTCCATTATCCGTTCATCCTTCCACCATTTCAC
CATTTCTTGTTATGTTGCATTCTGGTCTCTTCACGACCCA