Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g047950.1.1
CDS Infomation

GRAS family transcription factor (AHRD V3.3 *** G7KEQ0_MEDTR)
Sequence

ATGCAAGCATCACGGCGCAGAAGAACAACCATGTCTAATATGCTTTACTGTGAACCTGTG
CAGAAGGCAGAGGCCTACTATCTGCCTCAGTTTCAAACTTTAGAAAGCCATTTGAGCTGC
ATTAATGGCAGCCTTGGAGGTAATCACTCCTTCCAGACTTATCATGACCGCTATTGCATG
CTGGAGGCGTCTTCTGCCACTGGAAGCAACGCTGTTTACCACTCACCATCAACTGCTAGT
TTCTCATCAAATGGAAGCACGACGTGCAATCAAGAATCTCAGCTGTACCTGTCAGATGTT
CGTCAGTCCCCTGAGACAACTAACTATGGCTCACCCATAAGTGGATCTTGTATTACAGAT
GATGTGACTGATTTCATGCACAAGCTAAAGGAATTGGAAACAGCTATGCTGGGACCTGAT
GCGGACTTCCAGGAGAGTTATGATAATTCCTTGGCAAGCAGTATAGCTTCCTCAGAAATT
GATAGCTGGAGGCAAATGATGTTGGCCATACCTAGACGGGATTTGAAACAGGTGCTTATT
GCTTGCGCAAAAGCAGTTTCTGATGGTGAATTAGTAACTGCACAAGTGTTGATATCTGAG
TTGCGTCAAATGGTATCAGTGTCAGGGGAACCAATTCAGAGACTGGGAGCATACATCTTG
GAAGGGCTTGTTGCAAGGTTGGGTGCATCAGGAAGTTCCATATGCAAATCCTTGAGATGC
AAAGAACCCGCAAGTTTTGAGCTGTTGTCTTATATGCACGTTCTTTACGAGATTTGCCCT
TACTTCAAATTTGGATACATGTCAGCTAATGGTGCCATTGCAGAAGCAATGAAGGACGAA
AATAGAGTCCATATAATTGATTTTCAAATTGCTCAAGGGAGCCAGTGGGTGCCTATGATC
CAAGCTTTTGCAGCTCGTCCTGGAGGACCCCCACATATCCGCATAACAGGCATTGATGAT
TCCACCTCAGCATATGCTCGTGGAGGAGGCCTTGATATCGTGGGGCAGAGGCTTTCCAAA
CTTGCTAAAACTTTCAAGGTTCCTTTTGAGTTTCATCCTGCTGCCATGTCGGGTTCTGAT
ATTCAGCTAAAAAACCTTGGAATTCAACCTGGAGAAGCACTAGCAGTAAATTTTGCTTTC
ACATTACATCACATGCCAGATGAAAGTGTGAGCACTGAAAATCATCGGGATAGACTATTA
CGGATGGTCAAAAACCTCAACCCCAAGGTGGTTACCCTTGTTGAGCAAGAATCTAATACA
AATACTGCTGCTTTCTTTCCTCGATTTCTTGAAACCTTGGATTATTATTCAGCCATGTTT
GAATCAATCGATATGACTCTTCCAAGGGGACACAAGGAGCGCATCAATGTTGAGCAGCAT
TGTTTGGCGAGGGACGTTGTTAACATCATAGCATGTGAAGGGATTGAAAGGGTAGAACGA
CATGAACTTCTTGGTAAGTGGAAGTCGCGGTTTAGAATGGCTGGTTTTAACCCATACCCA
TTGAGTTCATTGGTGAACGCTACGATCAAGACATTGCTAGAGAGCTACTCTGATAAGTAT
AGGCTTGAAGAAAGAGATGGTGCTCTTTACCTTGGTTGGATGAACAGAGATTTGGTTGCT
TCTTGTGCCTGGAAATAA

Peptide Sequence

PEP ID

Solyc07g047950.1.1
PEP Infomation

GRAS family transcription factor (AHRD V3.3 *** G7KEQ0_MEDTR)
Sequence

MQASRRRRTTMSNMLYCEPVQKAEAYYLPQFQTLESHLSCINGSLGGNHSFQTYHDRYCM
LEASSATGSNAVYHSPSTASFSSNGSTTCNQESQLYLSDVRQSPETTNYGSPISGSCITD
DVTDFMHKLKELETAMLGPDADFQESYDNSLASSIASSEIDSWRQMMLAIPRRDLKQVLI
ACAKAVSDGELVTAQVLISELRQMVSVSGEPIQRLGAYILEGLVARLGASGSSICKSLRC
KEPASFELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENRVHIIDFQIAQGSQWVPMI
QAFAARPGGPPHIRITGIDDSTSAYARGGGLDIVGQRLSKLAKTFKVPFEFHPAAMSGSD
IQLKNLGIQPGEALAVNFAFTLHHMPDESVSTENHRDRLLRMVKNLNPKVVTLVEQESNT
NTAAFFPRFLETLDYYSAMFESIDMTLPRGHKERINVEQHCLARDVVNIIACEGIERVER
HELLGKWKSRFRMAGFNPYPLSSLVNATIKTLLESYSDKYRLEERDGALYLGWMNRDLVA
SCAWK*

Transcript Sequence

Transcript ID

Solyc07g047950.1.1
Transcript Infomation

GRAS family transcription factor (AHRD V3.3 *** G7KEQ0_MEDTR)
Sequence

ATGCAAGCATCACGGCGCAGAAGAACAACCATGTCTAATATGCTTTACTGTGAACCTGTG
CAGAAGGCAGAGGCCTACTATCTGCCTCAGTTTCAAACTTTAGAAAGCCATTTGAGCTGC
ATTAATGGCAGCCTTGGAGGTAATCACTCCTTCCAGACTTATCATGACCGCTATTGCATG
CTGGAGGCGTCTTCTGCCACTGGAAGCAACGCTGTTTACCACTCACCATCAACTGCTAGT
TTCTCATCAAATGGAAGCACGACGTGCAATCAAGAATCTCAGCTGTACCTGTCAGATGTT
CGTCAGTCCCCTGAGACAACTAACTATGGCTCACCCATAAGTGGATCTTGTATTACAGAT
GATGTGACTGATTTCATGCACAAGCTAAAGGAATTGGAAACAGCTATGCTGGGACCTGAT
GCGGACTTCCAGGAGAGTTATGATAATTCCTTGGCAAGCAGTATAGCTTCCTCAGAAATT
GATAGCTGGAGGCAAATGATGTTGGCCATACCTAGACGGGATTTGAAACAGGTGCTTATT
GCTTGCGCAAAAGCAGTTTCTGATGGTGAATTAGTAACTGCACAAGTGTTGATATCTGAG
TTGCGTCAAATGGTATCAGTGTCAGGGGAACCAATTCAGAGACTGGGAGCATACATCTTG
GAAGGGCTTGTTGCAAGGTTGGGTGCATCAGGAAGTTCCATATGCAAATCCTTGAGATGC
AAAGAACCCGCAAGTTTTGAGCTGTTGTCTTATATGCACGTTCTTTACGAGATTTGCCCT
TACTTCAAATTTGGATACATGTCAGCTAATGGTGCCATTGCAGAAGCAATGAAGGACGAA
AATAGAGTCCATATAATTGATTTTCAAATTGCTCAAGGGAGCCAGTGGGTGCCTATGATC
CAAGCTTTTGCAGCTCGTCCTGGAGGACCCCCACATATCCGCATAACAGGCATTGATGAT
TCCACCTCAGCATATGCTCGTGGAGGAGGCCTTGATATCGTGGGGCAGAGGCTTTCCAAA
CTTGCTAAAACTTTCAAGGTTCCTTTTGAGTTTCATCCTGCTGCCATGTCGGGTTCTGAT
ATTCAGCTAAAAAACCTTGGAATTCAACCTGGAGAAGCACTAGCAGTAAATTTTGCTTTC
ACATTACATCACATGCCAGATGAAAGTGTGAGCACTGAAAATCATCGGGATAGACTATTA
CGGATGGTCAAAAACCTCAACCCCAAGGTGGTTACCCTTGTTGAGCAAGAATCTAATACA
AATACTGCTGCTTTCTTTCCTCGATTTCTTGAAACCTTGGATTATTATTCAGCCATGTTT
GAATCAATCGATATGACTCTTCCAAGGGGACACAAGGAGCGCATCAATGTTGAGCAGCAT
TGTTTGGCGAGGGACGTTGTTAACATCATAGCATGTGAAGGGATTGAAAGGGTAGAACGA
CATGAACTTCTTGGTAAGTGGAAGTCGCGGTTTAGAATGGCTGGTTTTAACCCATACCCA
TTGAGTTCATTGGTGAACGCTACGATCAAGACATTGCTAGAGAGCTACTCTGATAAGTAT
AGGCTTGAAGAAAGAGATGGTGCTCTTTACCTTGGTTGGATGAACAGAGATTTGGTTGCT
TCTTGTGCCTGGAAATAA