Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g047900.3.1
CDS Infomation	CRS1/YhbY (CRM) domain protein (AHRD V3.3 *** A0A072U6I9_MEDTR)
Sequence	ATGTTCGTTTGCAGATATACTCAACGGCGCTCTATCAGAACCCTAACATCTCTATTTTCT CAATCTTCCTTGCAGCATGAGTCTATGAGGAGATACGATTCGGTGAATATAATGTCTAGC AGTGGGAATATGATGAGTTCTCCGGTCAAATATGTAAAAGTTCCTATTTGCAATGTTGGA GTACGGTGGATGTCAGGGAAAAGCATGAGGAGCAGAGTGGCAGCCAGAATGCAAAATGAG TCCAGCAAAACCCTTAGAGAGATTCGAAGGTCAAAGAAGTTAAAGTTGAAACTCATGACT GATGAAGAACGATTAATTTATAATCTCAGAAGAGCAAAGAAAAAAGTGGCTTTGCTACTT CAAAAGTTGAAAAAATATGAGCTCCCAGATTTACCATCTCCGCGGCATGATCCTGAGCTT TTGACTCCTGAGCAACTGCAAGCGTATAAGAAGATTGGTTTCAGGAATAAAAATTATGTC CCTGTTGGTGTTCGTGGAGTCTTTGGAGGAGTTGTCCAAAATATGCATCTCCACTGGAAG TTTCATGAGACTGTGCAGGTTTGCTGTGATAACTTTCCCAAGGAAAAAATTAAGGAGATG GCTTCTATGCTGGCTCGACTAAGTGGTGGAATAGTGATTAACATACATAATGTGAAAACG ATTATTATGTTTCGTGGCAGAAACTACCGGCAGCCAAAGAATTTGATACCTGTCAACACA CTTACAAAAAGGAAGGCATTATTTAAAGCCCGATTCGAACAAGCCCTAGAATCACAGAAA TTAAACATAAAGAAAATAGAACAAGAGCTCCGGAGGAAGGGAATAAATCCTGATGATCCG GCAGCCAGAGCCAGCATCCAGCGAGTAGCATCCACATTCTTCAATGCCATTGATAAGAAA GAAGGAAGCCCATATGTTTTTCAGGAGGATTATGGTACCAAGTTGAGTCACAGCAGTAGT GTAGACGAAAAACATTCAACAGCTGAAGACAGTGACCAGGAGGAGCTTGACGATTTCATT GCTCAGATAGAAAAGGCAGCTGATGACGAATGGGCAGCTGAGGAAGAAGCAGAAAAAGAA GAATCGGGAAGGATTAGATATTGGAACAAAGAAGATATAGGTGGTCGATTTAGAAGATCT GGAATGATGGGAAGTGATGAATCAGACGATGAGACAGGAGGAAGGTCAAGTGGTAGGAGT AGGACATCTGGAAGGAAGATGGGTGATGACGATGAACAAGATGATGTATCTGAAGATGAC AGTGAATTAGATGATGATGATGGTCGACATACCCACAAGTACAATGCTCCTGTCAGGCAT CCTAAGTATAAAACAGAGAAATGGCAGAAAGGTAAGAGCAATAGACCTATGAATGATGGA GGTTCAAGAAGAAATTTTGACCCTTATTTGAAGGGAACGATGGCTTCAGATAGGTTAAGT GACCTTGACGAAGCCATGTGGTCTTCAGATGATGAGGACAGACACAACAAAACACAACCA AATGAGTATAGAAGTAGTAGTGATGAGGGGGAGGATTATGATAAGATAGCAATATGGGAA TCAGATGTAGATGATGCACCTGGTTCGAGGGCATCAAGAAGGGTTGGTAATAGCTTTAGG ACCAGTGGTCAAGGGCAAATGAAGATAAATGAGGATACCCGCGAGAGCAAGAGAAAGGTG AAAAGCTCAAAAGACGTGGATGAAACTTGGGACAGCGATTGA

Peptide Sequence

PEP ID	Solyc07g047900.3.1
PEP Infomation	CRS1/YhbY (CRM) domain protein (AHRD V3.3 *** A0A072U6I9_MEDTR)
Sequence	MFVCRYTQRRSIRTLTSLFSQSSLQHESMRRYDSVNIMSSSGNMMSSPVKYVKVPICNVG VRWMSGKSMRSRVAARMQNESSKTLREIRRSKKLKLKLMTDEERLIYNLRRAKKKVALLL QKLKKYELPDLPSPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWK FHETVQVCCDNFPKEKIKEMASMLARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPVNT LTKRKALFKARFEQALESQKLNIKKIEQELRRKGINPDDPAARASIQRVASTFFNAIDKK EGSPYVFQEDYGTKLSHSSSVDEKHSTAEDSDQEELDDFIAQIEKAADDEWAAEEEAEKE ESGRIRYWNKEDIGGRFRRSGMMGSDESDDETGGRSSGRSRTSGRKMGDDDEQDDVSEDD SELDDDDGRHTHKYNAPVRHPKYKTEKWQKGKSNRPMNDGGSRRNFDPYLKGTMASDRLS DLDEAMWSSDDEDRHNKTQPNEYRSSSDEGEDYDKIAIWESDVDDAPGSRASRRVGNSFR TSGQGQMKINEDTRESKRKVKSSKDVDETWDSD*

Transcript Sequence

Transcript ID	Solyc07g047900.3.1
Transcript Infomation	CRS1/YhbY (CRM) domain protein (AHRD V3.3 *** A0A072U6I9_MEDTR)
Sequence	AAAAACATCTCACATAAATATGATTATTGTATATTATTTTATGTATCAAATGTATTTGTA TTACATATCAAATGTATTTTTGTATTATGTATCAAATGTATACATATTTGGTATAAAAAT ATCATGAAATTTGTATTCTTGCATTTGTAGTCTTCCACACAAATTTTGTTCATCAATACA ATTGATGTATATATAATACAAATTAATTGTATCAATTGCATACAAACTATTATAATTGGA CTTGTATCAACTGTATTTGTATTCTACATCATTTGTATTCATACTAAAACGAATACATTT ATTACAAATCAGTTACTCGTTGGTCTCTCTCTTCGTCTTAATATGTAGATATAATTTATA ATTAAGAAAATGATAACTATCAATTTCTAATTAAGTCAAAACTATAATCATTTTCCTGTC AAACAACTCACCTTATTCAATCTCGACCCAATTTTACTTGGGTTCTCTTGTAGAGACAAA TGTGGCCCAATTTCAAATTCCCAAACCAATACCACAATTAACCCAATCTGAACTAGCCCA TTTTTCCTGCCTCCCATGGTTTTCTCCCTCGCCAGCCACCACTAGCCGGTGAACACCACC ACGCCGACCAAATCCCCGCACTCAGTATCCCAAAATCCAAAGATTACTTCTTCTCCGGAA AATTTTGATAAACTCTGAGAAGGCGGATATCCACCACTCAGTGACTGAGTTCTCCATTGC CGTCGTCATGTTCGTTTGCAGATATACTCAACGGCGCTCTATCAGAACCCTAACATCTCT ATTTTCTCAATCTTCCTTGCAGCATGAGTCTATGAGGAGATACGATTCGGTGAATATAAT GTCTAGCAGTGGGAATATGATGAGTTCTCCGGTCAAATATGTAAAAGTTCCTATTTGCAA TGTTGGAGTACGGTGGATGTCAGGGAAAAGCATGAGGAGCAGAGTGGCAGCCAGAATGCA AAATGAGTCCAGCAAAACCCTTAGAGAGATTCGAAGGTCAAAGAAGTTAAAGTTGAAACT CATGACTGATGAAGAACGATTAATTTATAATCTCAGAAGAGCAAAGAAAAAAGTGGCTTT GCTACTTCAAAAGTTGAAAAAATATGAGCTCCCAGATTTACCATCTCCGCGGCATGATCC TGAGCTTTTGACTCCTGAGCAACTGCAAGCGTATAAGAAGATTGGTTTCAGGAATAAAAA TTATGTCCCTGTTGGTGTTCGTGGAGTCTTTGGAGGAGTTGTCCAAAATATGCATCTCCA CTGGAAGTTTCATGAGACTGTGCAGGTTTGCTGTGATAACTTTCCCAAGGAAAAAATTAA GGAGATGGCTTCTATGCTGGCTCGACTAAGTGGTGGAATAGTGATTAACATACATAATGT GAAAACGATTATTATGTTTCGTGGCAGAAACTACCGGCAGCCAAAGAATTTGATACCTGT CAACACACTTACAAAAAGGAAGGCATTATTTAAAGCCCGATTCGAACAAGCCCTAGAATC ACAGAAATTAAACATAAAGAAAATAGAACAAGAGCTCCGGAGGAAGGGAATAAATCCTGA TGATCCGGCAGCCAGAGCCAGCATCCAGCGAGTAGCATCCACATTCTTCAATGCCATTGA TAAGAAAGAAGGAAGCCCATATGTTTTTCAGGAGGATTATGGTACCAAGTTGAGTCACAG CAGTAGTGTAGACGAAAAACATTCAACAGCTGAAGACAGTGACCAGGAGGAGCTTGACGA TTTCATTGCTCAGATAGAAAAGGCAGCTGATGACGAATGGGCAGCTGAGGAAGAAGCAGA AAAAGAAGAATCGGGAAGGATTAGATATTGGAACAAAGAAGATATAGGTGGTCGATTTAG AAGATCTGGAATGATGGGAAGTGATGAATCAGACGATGAGACAGGAGGAAGGTCAAGTGG TAGGAGTAGGACATCTGGAAGGAAGATGGGTGATGACGATGAACAAGATGATGTATCTGA AGATGACAGTGAATTAGATGATGATGATGGTCGACATACCCACAAGTACAATGCTCCTGT CAGGCATCCTAAGTATAAAACAGAGAAATGGCAGAAAGGTAAGAGCAATAGACCTATGAA TGATGGAGGTTCAAGAAGAAATTTTGACCCTTATTTGAAGGGAACGATGGCTTCAGATAG GTTAAGTGACCTTGACGAAGCCATGTGGTCTTCAGATGATGAGGACAGACACAACAAAAC ACAACCAAATGAGTATAGAAGTAGTAGTGATGAGGGGGAGGATTATGATAAGATAGCAAT ATGGGAATCAGATGTAGATGATGCACCTGGTTCGAGGGCATCAAGAAGGGTTGGTAATAG CTTTAGGACCAGTGGTCAAGGGCAAATGAAGATAAATGAGGATACCCGCGAGAGCAAGAG AAAGGTGAAAAGCTCAAAAGACGTGGATGAAACTTGGGACAGCGATTGACCAGGATGCCA AGGGATACAGACACTGAGGCTGGTTTTATTTATGGTACTT