Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g047860.3.1
CDS Infomation	Nuclear pore complex protein NUP133 (AHRD V3.3 *** NU133_ARATH)
Sequence	ATGTTCTCTCCGGGAACAAGGAGATCAAATTTCAATGCTCGTAAGAGTGGCCGGGATAAA CCTACTACTGGTTCACCGGTGACGCCCTTCACCGAGAATAGAAAGCCGCTTGATGATAAT TCTCCTATACCTAATCGCCCTAATACTGGTACTCCTGCTCCCTGGGCTTCCCGTCTTTCT GTTCTCGCTAGAATCCCGCCTGCGAAGAAGAGTGATAAAGGAGAAGAGACTGATCCAATT CAACCTGTCTATGTTGGAGAGTTCCCTCAAGTCCTACGCGATGAACAGGACGTTTTGCTT CAGAAACATGCTCCTGGTAATGCGTCCATCTCTGGGGGAATGGATAAGGAAACTTCCTTG GCGTGGGTTATATGTGGCAACAAACTCTTTGTTTGGAGTTTCTTATCACCTGCAGCTTCG AGGAACTGCATTGTACTTGATCTTCCTCCGACAATGTCTGGAAATGAAGATACTGGAAAA TATATTAATGATTGGTTTGTTTGTCTCATCAATTGGGATAGGAATACCAATAAAGTTTCC CAACAATGCAGTTCTGCTGGTATTGTTGCCTGTAATCGGAGAACTCGAAATCTCGTGTAC TGGCCAGATATCTACTCTGCAACTCGGAATGAACCAGTAGTAAGTTTTCCCGAGGAGTCT GAGGTGAGTTCTTCTTCTTCTGATGTGAAGGGCACCCCAACCAAGTTGCGACAGCAGAAT AAACCTGGGAGCGTTGTTACTCGTTCAAATTCTCTCAACTGTTTGATTGCTTGTGCGGTC CCTAAGGTTCATCACAATCATGTCTCTGTTGCTCTTGCCTGTAGTTCTAATGGCGAACTT TGGCAATTTGTCTGCAGCCCCAGTTGTATTCAGCGCAAAAAGATGTATGAGGACATGTTT AGTAAGAACTCTCATGGAAATGATGGACAGTTCTTTGGAGGAAGGGGTTACCGTAGGTCA CTGGTTTGGCAGTCTTGTTCCCATTCTTTGGACAAGTCCAACAGACAGTTTCTTTTATTG ACAGATCATGAAATACAATGTTTTGCTATTGAACTTTCTCCCTCTTTCCATGTTTCTAAG ATCTGGACTCATGAAATCGTTGGCACTGATGGTGATCTGGGTATCCAGAAGGATCTGGCA GGGCAGAAGCGTATTTGGCCTCTGGATTTGCAGATTGATAATGATGGCAAGGTTATTACT ATTCTCATTGCAATTTTTTGCAAGGATCGGATCACCAGTTCAAGCTACACTGAGTATTCA CTTCTAACCATGCAATATAAATCTGGAGTGAATGTCTCCTCAGAATCTGTGCCGCCACAT GAAAGGATTTTAGAGAAAAAGGCTCCTATCCAAGTGATAATTCCTAAAGCTAGACTTGAG GATGAAGAGTTTTTATTCTCTATGAGACTGAAGGTTGGGGGTAAGCCAGCCGGTTCAGTG ATCATACTTTCTGGTGATGGCACTGCAACCGTCTCGCATTACTGGAGAAATTCTACTCGT CTTTATCAATTTGATCTTCCATATGATGCTGGAAGGGTTCTTGATGCATCAGTTTTCCCT TCAGATGATGGCGAGGATGGCGCTTGGGCTGTTCTAACTGAAAAAGCTGGAGTTTGGGCT ATACCTGAGAGGGCAGTTTTACTTGGTGGAGTTGAACCACCGGAGAGAAGTTTGTCACGT AAAGGAAGCTCTAATGAGAGGTCATCTCTGGAAGAGAGGAAAAATTTATCTTTTTCAGGT AATGTTGCTCCAAGAAGGGCGACTTCAGAAGCATGGGATGCTGGAGATAAGCAACGGCCT GGGCTAACTGGAATTGCACGTCGAAATGCTCAAGATGAAGAATCTGAAGCTTTACTAAAT CAGCTTTTCCATGATTTTCTTTTATCTGGGCATGCGGATGGTGCTTTCGATAAATTGAAG ACGTCAGGGGCATTTGAAAGAGAGGGCGAAACAAATGTTTTTGCAAGGACAAGCAAATCA ATTGTGGATACCCTTGCAAAACATTGGACAACCACCAGAGGTGCTGAGATTGTGACTTCG TCTGTCATGTCCTCACAACTTTTGGAGAAGCAGAAAAAGCATAAAAGATACCTTCAATTC CTGGCTTTATCCAAGTGCCATGAAGAACTATGTTCTAGACAGAGGCATGCTTTGCATATT ATCATGGAACATGGTGAAAAACTTGCTGGCATGATCCAATTGAGGGAGTTGCAGAACGTG CTCAATCAGAACCGTGCCTCAGGAGCTGGCTCTTATTCAACTACTGAGATGTCGATTTCT AGTTCCCTCTGGGATGTCATCCAATTGGTAGGCGAAAGAGCTCGCCGAAGAACAGTTCTT TTGATGGATAGGGACAATGCTGAAGTTTTCTACAGTAAGGTCTCAGACCTTGACGAATTT TTTTATTGCTTAGAGAGAGACCTCAATTACATTATCAGTGAAAAGATGACAGTTTCTGTT ATATTCCAAAAAGCATGTGAACTCTCCAGTGCCTGTGTGACTTTGCTTCGCACAGCCATG ACTTGTAGAAATGAAAATCACCTCTGGTATCCACCGTCTGAGGGCTTGACACCATGGACT TGTCAAGAAAAGGTGCGGAACGGGCTCTGGAGCCTTGCATATTTTATGCTTCAACTGGTG AAGGAAAATAATTCCCTGGATGATACCATCAAATTAGATTTTCATTCACACCTTGAAGTT CTATCTGATGTACTTTTGGAAGCATATTCTGGTGCTATCTGTGCGAAAGTTGAGCGTGGA GAAGGACACAAAAGTCTGTTAGATGAGTACTGTAATAGAAGAGATGACCTCTTGAAATGT CTTTATCAGCAAGTGAAAGATTTAGTTGAAGGCAAACTGCAGGATTTAGGTGAAGCAGCT GAGGAGCAAAAGTTTGAGATTTTTGGAAAGCTTTCCTCAGCCTTGTTGTCTCTTGCAAAA AGACACGAAGGTTACAAAACTCTATGGAGTATATGCTGTGATCTCAATAATACTGACCTA CTTAAAAATCTTATGCATGACAGCATGGGACCTAAACGAGGCTTTAGTTACTTTGTGTTT CAACAACTGTATGACAGCAGACAGTTCTCTAAGCTTATGAGACTTGGGGAGGAATTTCAG GAAGACCTAGCAATATTTTTGAAACATCATCAGGATCTCCTTTGGCTTCATGAAATATTT CTTCATAAATTTTCTGAAGCTTCTGAAACTCTACATGTTTTGTCTCTTTCACCAAATGAT AGCTCCGCTATGGATAGTGAAACCAGCTCATTTGGCACCACCATAAAAACAAGTTTGGTG GAAAGAAGGCGGCTTTTGAATCTCTCGAAAGTAGCTGCATTGGCGGGAAGAAGTGCTAAT TTTGAATCAAAGGTGAAGCGCATAGAGGCTGATTTAAAGATTCTGTACTTGCAGGAAGAA ATAATGAAACTCCTTCCGGACGATGAAACGCAAAATATAAGCCAGCAGCTTCTTCCTCCA GTGGACCTTATTGAATTGTGCCTTAAAACTCAGGATAGGGAGCTTTCGTTGAGAGTTTTT GACATTTTTGCATGGACCAGCTCCTCTTTTATCAAGTCTAATGCAAGCCTCTTGGAGGAC TGCTGGAGAAATGCCTCCAATCAGGACGACTGGGAGAGGCTGTATCAAGCATCAGTAGAT GAGGGGTGGGGTGATGAGGAGACTTTGAGCATTCTAAAAGACACCATTCTTTTCCAGGCT TCCAGCAGGTGCTATGGCCTCAAAGCTGAAACTTTTGAGGGCAATTTCCAGGAAGTGCTG CCGCTGAGGCTAGAAAATTCTGAGCAAGTGACTTTAAAGAACATGGGATCCTCTGTGGAA ACAATACTGATGCAGCACAAGGATTATCCTGATGCTGGCAAGTTAATGCTCACATCAGTT ATGCTAGGAAGTGTTCATTCCGATACCATTAGTATTGTGGAAGAGGAGGGACCTACCCCA ATGGAGTAA

Peptide Sequence

PEP ID	Solyc07g047860.3.1
PEP Infomation	Nuclear pore complex protein NUP133 (AHRD V3.3 *** NU133_ARATH)
Sequence	MFSPGTRRSNFNARKSGRDKPTTGSPVTPFTENRKPLDDNSPIPNRPNTGTPAPWASRLS VLARIPPAKKSDKGEETDPIQPVYVGEFPQVLRDEQDVLLQKHAPGNASISGGMDKETSL AWVICGNKLFVWSFLSPAASRNCIVLDLPPTMSGNEDTGKYINDWFVCLINWDRNTNKVS QQCSSAGIVACNRRTRNLVYWPDIYSATRNEPVVSFPEESEVSSSSSDVKGTPTKLRQQN KPGSVVTRSNSLNCLIACAVPKVHHNHVSVALACSSNGELWQFVCSPSCIQRKKMYEDMF SKNSHGNDGQFFGGRGYRRSLVWQSCSHSLDKSNRQFLLLTDHEIQCFAIELSPSFHVSK IWTHEIVGTDGDLGIQKDLAGQKRIWPLDLQIDNDGKVITILIAIFCKDRITSSSYTEYS LLTMQYKSGVNVSSESVPPHERILEKKAPIQVIIPKARLEDEEFLFSMRLKVGGKPAGSV IILSGDGTATVSHYWRNSTRLYQFDLPYDAGRVLDASVFPSDDGEDGAWAVLTEKAGVWA IPERAVLLGGVEPPERSLSRKGSSNERSSLEERKNLSFSGNVAPRRATSEAWDAGDKQRP GLTGIARRNAQDEESEALLNQLFHDFLLSGHADGAFDKLKTSGAFEREGETNVFARTSKS IVDTLAKHWTTTRGAEIVTSSVMSSQLLEKQKKHKRYLQFLALSKCHEELCSRQRHALHI IMEHGEKLAGMIQLRELQNVLNQNRASGAGSYSTTEMSISSSLWDVIQLVGERARRRTVL LMDRDNAEVFYSKVSDLDEFFYCLERDLNYIISEKMTVSVIFQKACELSSACVTLLRTAM TCRNENHLWYPPSEGLTPWTCQEKVRNGLWSLAYFMLQLVKENNSLDDTIKLDFHSHLEV LSDVLLEAYSGAICAKVERGEGHKSLLDEYCNRRDDLLKCLYQQVKDLVEGKLQDLGEAA EEQKFEIFGKLSSALLSLAKRHEGYKTLWSICCDLNNTDLLKNLMHDSMGPKRGFSYFVF QQLYDSRQFSKLMRLGEEFQEDLAIFLKHHQDLLWLHEIFLHKFSEASETLHVLSLSPND SSAMDSETSSFGTTIKTSLVERRRLLNLSKVAALAGRSANFESKVKRIEADLKILYLQEE IMKLLPDDETQNISQQLLPPVDLIELCLKTQDRELSLRVFDIFAWTSSSFIKSNASLLED CWRNASNQDDWERLYQASVDEGWGDEETLSILKDTILFQASSRCYGLKAETFEGNFQEVL PLRLENSEQVTLKNMGSSVETILMQHKDYPDAGKLMLTSVMLGSVHSDTISIVEEEGPTP ME*

Transcript Sequence

Transcript ID	Solyc07g047860.3.1
Transcript Infomation	Nuclear pore complex protein NUP133 (AHRD V3.3 *** NU133_ARATH)
Sequence	AGACCATCGGAGAAAAAAGAGCACAGCAGCACCCTAACCGCTGCCATATTTTTCAAAAAC CTGAAACTCTCTTCAGATTTTGCTTTTAAGTTTCTAATCTCTTCTTCTTACTAGTGAAGT TCGCCATTAGAGAACCTTGCGAGCATTAATACGCCATTTTTATACTCAAACCACTTTAAA CCCTACTTCTCATTCCGTTAACCCAAATGTTCTCTCCGGGAACAAGGAGATCAAATTTCA ATGCTCGTAAGAGTGGCCGGGATAAACCTACTACTGGTTCACCGGTGACGCCCTTCACCG AGAATAGAAAGCCGCTTGATGATAATTCTCCTATACCTAATCGCCCTAATACTGGTACTC CTGCTCCCTGGGCTTCCCGTCTTTCTGTTCTCGCTAGAATCCCGCCTGCGAAGAAGAGTG ATAAAGGAGAAGAGACTGATCCAATTCAACCTGTCTATGTTGGAGAGTTCCCTCAAGTCC TACGCGATGAACAGGACGTTTTGCTTCAGAAACATGCTCCTGGTAATGCGTCCATCTCTG GGGGAATGGATAAGGAAACTTCCTTGGCGTGGGTTATATGTGGCAACAAACTCTTTGTTT GGAGTTTCTTATCACCTGCAGCTTCGAGGAACTGCATTGTACTTGATCTTCCTCCGACAA TGTCTGGAAATGAAGATACTGGAAAATATATTAATGATTGGTTTGTTTGTCTCATCAATT GGGATAGGAATACCAATAAAGTTTCCCAACAATGCAGTTCTGCTGGTATTGTTGCCTGTA ATCGGAGAACTCGAAATCTCGTGTACTGGCCAGATATCTACTCTGCAACTCGGAATGAAC CAGTAGTAAGTTTTCCCGAGGAGTCTGAGGTGAGTTCTTCTTCTTCTGATGTGAAGGGCA CCCCAACCAAGTTGCGACAGCAGAATAAACCTGGGAGCGTTGTTACTCGTTCAAATTCTC TCAACTGTTTGATTGCTTGTGCGGTCCCTAAGGTTCATCACAATCATGTCTCTGTTGCTC TTGCCTGTAGTTCTAATGGCGAACTTTGGCAATTTGTCTGCAGCCCCAGTTGTATTCAGC GCAAAAAGATGTATGAGGACATGTTTAGTAAGAACTCTCATGGAAATGATGGACAGTTCT TTGGAGGAAGGGGTTACCGTAGGTCACTGGTTTGGCAGTCTTGTTCCCATTCTTTGGACA AGTCCAACAGACAGTTTCTTTTATTGACAGATCATGAAATACAATGTTTTGCTATTGAAC TTTCTCCCTCTTTCCATGTTTCTAAGATCTGGACTCATGAAATCGTTGGCACTGATGGTG ATCTGGGTATCCAGAAGGATCTGGCAGGGCAGAAGCGTATTTGGCCTCTGGATTTGCAGA TTGATAATGATGGCAAGGTTATTACTATTCTCATTGCAATTTTTTGCAAGGATCGGATCA CCAGTTCAAGCTACACTGAGTATTCACTTCTAACCATGCAATATAAATCTGGAGTGAATG TCTCCTCAGAATCTGTGCCGCCACATGAAAGGATTTTAGAGAAAAAGGCTCCTATCCAAG TGATAATTCCTAAAGCTAGACTTGAGGATGAAGAGTTTTTATTCTCTATGAGACTGAAGG TTGGGGGTAAGCCAGCCGGTTCAGTGATCATACTTTCTGGTGATGGCACTGCAACCGTCT CGCATTACTGGAGAAATTCTACTCGTCTTTATCAATTTGATCTTCCATATGATGCTGGAA GGGTTCTTGATGCATCAGTTTTCCCTTCAGATGATGGCGAGGATGGCGCTTGGGCTGTTC TAACTGAAAAAGCTGGAGTTTGGGCTATACCTGAGAGGGCAGTTTTACTTGGTGGAGTTG AACCACCGGAGAGAAGTTTGTCACGTAAAGGAAGCTCTAATGAGAGGTCATCTCTGGAAG AGAGGAAAAATTTATCTTTTTCAGGTAATGTTGCTCCAAGAAGGGCGACTTCAGAAGCAT GGGATGCTGGAGATAAGCAACGGCCTGGGCTAACTGGAATTGCACGTCGAAATGCTCAAG ATGAAGAATCTGAAGCTTTACTAAATCAGCTTTTCCATGATTTTCTTTTATCTGGGCATG CGGATGGTGCTTTCGATAAATTGAAGACGTCAGGGGCATTTGAAAGAGAGGGCGAAACAA ATGTTTTTGCAAGGACAAGCAAATCAATTGTGGATACCCTTGCAAAACATTGGACAACCA CCAGAGGTGCTGAGATTGTGACTTCGTCTGTCATGTCCTCACAACTTTTGGAGAAGCAGA AAAAGCATAAAAGATACCTTCAATTCCTGGCTTTATCCAAGTGCCATGAAGAACTATGTT CTAGACAGAGGCATGCTTTGCATATTATCATGGAACATGGTGAAAAACTTGCTGGCATGA TCCAATTGAGGGAGTTGCAGAACGTGCTCAATCAGAACCGTGCCTCAGGAGCTGGCTCTT ATTCAACTACTGAGATGTCGATTTCTAGTTCCCTCTGGGATGTCATCCAATTGGTAGGCG AAAGAGCTCGCCGAAGAACAGTTCTTTTGATGGATAGGGACAATGCTGAAGTTTTCTACA GTAAGGTCTCAGACCTTGACGAATTTTTTTATTGCTTAGAGAGAGACCTCAATTACATTA TCAGTGAAAAGATGACAGTTTCTGTTATATTCCAAAAAGCATGTGAACTCTCCAGTGCCT GTGTGACTTTGCTTCGCACAGCCATGACTTGTAGAAATGAAAATCACCTCTGGTATCCAC CGTCTGAGGGCTTGACACCATGGACTTGTCAAGAAAAGGTGCGGAACGGGCTCTGGAGCC TTGCATATTTTATGCTTCAACTGGTGAAGGAAAATAATTCCCTGGATGATACCATCAAAT TAGATTTTCATTCACACCTTGAAGTTCTATCTGATGTACTTTTGGAAGCATATTCTGGTG CTATCTGTGCGAAAGTTGAGCGTGGAGAAGGACACAAAAGTCTGTTAGATGAGTACTGTA ATAGAAGAGATGACCTCTTGAAATGTCTTTATCAGCAAGTGAAAGATTTAGTTGAAGGCA AACTGCAGGATTTAGGTGAAGCAGCTGAGGAGCAAAAGTTTGAGATTTTTGGAAAGCTTT CCTCAGCCTTGTTGTCTCTTGCAAAAAGACACGAAGGTTACAAAACTCTATGGAGTATAT GCTGTGATCTCAATAATACTGACCTACTTAAAAATCTTATGCATGACAGCATGGGACCTA AACGAGGCTTTAGTTACTTTGTGTTTCAACAACTGTATGACAGCAGACAGTTCTCTAAGC TTATGAGACTTGGGGAGGAATTTCAGGAAGACCTAGCAATATTTTTGAAACATCATCAGG ATCTCCTTTGGCTTCATGAAATATTTCTTCATAAATTTTCTGAAGCTTCTGAAACTCTAC ATGTTTTGTCTCTTTCACCAAATGATAGCTCCGCTATGGATAGTGAAACCAGCTCATTTG GCACCACCATAAAAACAAGTTTGGTGGAAAGAAGGCGGCTTTTGAATCTCTCGAAAGTAG CTGCATTGGCGGGAAGAAGTGCTAATTTTGAATCAAAGGTGAAGCGCATAGAGGCTGATT TAAAGATTCTGTACTTGCAGGAAGAAATAATGAAACTCCTTCCGGACGATGAAACGCAAA ATATAAGCCAGCAGCTTCTTCCTCCAGTGGACCTTATTGAATTGTGCCTTAAAACTCAGG ATAGGGAGCTTTCGTTGAGAGTTTTTGACATTTTTGCATGGACCAGCTCCTCTTTTATCA AGTCTAATGCAAGCCTCTTGGAGGACTGCTGGAGAAATGCCTCCAATCAGGACGACTGGG AGAGGCTGTATCAAGCATCAGTAGATGAGGGGTGGGGTGATGAGGAGACTTTGAGCATTC TAAAAGACACCATTCTTTTCCAGGCTTCCAGCAGGTGCTATGGCCTCAAAGCTGAAACTT TTGAGGGCAATTTCCAGGAAGTGCTGCCGCTGAGGCTAGAAAATTCTGAGCAAGTGACTT TAAAGAACATGGGATCCTCTGTGGAAACAATACTGATGCAGCACAAGGATTATCCTGATG CTGGCAAGTTAATGCTCACATCAGTTATGCTAGGAAGTGTTCATTCCGATACCATTAGTA TTGTGGAAGAGGAGGGACCTACCCCAATGGAGTAATTGCCCTAGTATTCTGATGATTGTG GGAAGCCGTATAGTTTCTTTAGCCGCTTGAGCATGAGCACCTTGATCTGCACGCAGTTCT TTAACGCCGATGGATGAAATTGCATATGGCAGTCATATTTCTTTATCAGTGCTCGTTGAA GTTAAATCAATGTATGGTGAGTGCGTGGTGGTGTCAAACAAAGTTTGTTTAGAATGATTG ATGAGCAGTGCCGGAACATTGGGTTCTTTTAAGAGTTCTAAGTCACCAAGCAGGGGAGAT TTTGCCTTGTAAATTTAGTTAACATGTGCTTTATGATTTCTTTTTAAAAAAACTGATGTT TTTTTGGCTTTGATGATCACAAGTCACAACTATTAGTTAGGCATATGAGTTTCAGAGAGT TATACTGATTCTTTCGAAAGAAAACAGTGCATTTTATGTTGGATTGTGTGTTGTTTATAT ATTGTTACGGCAAAGGAGAGCACTTCTTGAAATAAAAAAAGGTTATTCACACTTGATA