Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g047780.3.1
CDS Infomation

CONSTANS interacting protein 6
Sequence

ATGCTGCCTCCACGCCCCAGCGGGTTGCCTCCGTCCTTATTTCTTTCCTCTTCAGACACC
AGAGCATCAACTGGTAATCATGACCCTGGAATGAACTCTGATCAGAATCGTGAATCGCCT
GCTGAGAGTGCTAATTCAAGAGATACGTGGCCTGTAATTGATGCTGCTACTCAAGTGAAG
CTTGAGAATCAGAAAGCTGAGGATGGTTATTATGAACAGTCTGTGACTCACAGGCCTGCT
AGTGCAAATAAGGTTTCTCTTCTTGATATTGCTAGAGAACAAGTGGATATAATATCTGAA
AAAATGTATTTGCTCCCCAATGAGTATTTAGAAGAGCTAAAAGGTAGGCTTCGAGGGATG
CTTGAAGGGAACGGTGGTCCTCAGCAAAGAGATGAACTTTTGTTTTTACAGAGGCTTGTT
CAGACTAGGTCTGATTTGACTGCTAATACATTGATTAAAGCTCATCGAGTTCAGCTGGAA
ATTCTTGTCGCTATTAATAGTGGAATTCAGTTTTTCCTGCATCATAGTATGAATCTTTCT
CAGACTTGCCTGATTGAGGTTTTTGTATACAAAAGATGTCGGAATATAGCATGCCAAAGC
CAGTTGCCTGCAGAAGATTGCCACTGTGAGATATGCACCAACCGAAAGGGATTCTGCAGC
CTTTGCATGTGTGTAATCTGTAACAAGTTTGATTTTGAAGTGAATACATGTCGGTGGATT
GGTTGCGACTCCTGTGCTCATTGGACTCACACGGACTGCGCAATTCGTGATAAACAAATT
GGAACAGGTCCTTCTTCTGTGAATGGGCTGGGGTCTGCTGAAATGCAGTTCAGGTGTAGA
GCATGCAATCGCACTTCTGAGCTTTTTGGTTGGGTGAAAGATGTATTCCAACAATGTGCA
CCTACCTGGAATGGGGAATCATTGATAAGAGAACTAACTGTTGTAAGTAAGATCTTTCGA
CTGAGTGAGAACACAAGAGGGAGGCAGCTGTTTTGGAAGTCTGAGGAGCTCATAGAAAAA
CTAAAGGGTGGAGTGGCAGAGACAACAGCTTGCAGGATTATATTAACTTTTCTCCAAGAG
CTTGAGATGGACTCATCAAGGAGCTCTGAGGCTGGAAATAAAGAAAGGATGATTCCACCC
CAGGAGGCATGCAACCGAATTGCTGCAGTGGTACAAGAAGCAGTGCAGACAATGGGAGTA
GTGGCTGATGAAAAATTGAGGATGCTAAAGAAAGCTCGCCAAGCTCTCGAGACATGTGAT
CATGAACTGGAGGAAAAAGCTAAAGAAGTTTCAGAACTTAAACTGGAGAGGCAACGAAAA
AGACTACAAATTGATGAATTAGAGAGCATTGCTAGGCTTAAAGAAGCAGAAGCAGATATG
TTCCAGCTCAAGGCAGATGAGGCAAGACGAGAAGCTGACAGGTTGCAGAGGATTGCTCTT
GCAAAATCAGGGAAATCAGAAGAAGATTATGCCAGTAGTTACCTTAAACAACGTCTTAGC
GAGGCTGAAGCTGAGAAACAATTCCTTTTCGAGAAGATTAAACTTCAAGATCAGAGTTCT
CGTTCATCACAAGGCAATGACATCGGTGACAGTTCACAAGAACTTTACTCTAAAATACAA
GAGATCCTAAAGAGTGTGTAG

Peptide Sequence

PEP ID

Solyc07g047780.3.1
PEP Infomation

CONSTANS interacting protein 6
Sequence

MLPPRPSGLPPSLFLSSSDTRASTGNHDPGMNSDQNRESPAESANSRDTWPVIDAATQVK
LENQKAEDGYYEQSVTHRPASANKVSLLDIAREQVDIISEKMYLLPNEYLEELKGRLRGM
LEGNGGPQQRDELLFLQRLVQTRSDLTANTLIKAHRVQLEILVAINSGIQFFLHHSMNLS
QTCLIEVFVYKRCRNIACQSQLPAEDCHCEICTNRKGFCSLCMCVICNKFDFEVNTCRWI
GCDSCAHWTHTDCAIRDKQIGTGPSSVNGLGSAEMQFRCRACNRTSELFGWVKDVFQQCA
PTWNGESLIRELTVVSKIFRLSENTRGRQLFWKSEELIEKLKGGVAETTACRIILTFLQE
LEMDSSRSSEAGNKERMIPPQEACNRIAAVVQEAVQTMGVVADEKLRMLKKARQALETCD
HELEEKAKEVSELKLERQRKRLQIDELESIARLKEAEADMFQLKADEARREADRLQRIAL
AKSGKSEEDYASSYLKQRLSEAEAEKQFLFEKIKLQDQSSRSSQGNDIGDSSQELYSKIQ
EILKSV*

Transcript Sequence

Transcript ID

Solyc07g047780.3.1
Transcript Infomation

CONSTANS interacting protein 6
Sequence

TTCTTAGTCATCGTCTACCGTTGACTTTTGTTATTCTTTTGCCAGCAAAGTTAAAAAGGG
AAAAAAGAAGAATCTTTTTTTGTTTCAGAAATCTGTAATTGAACCCTCAAATTCTCTACA
GAAAATGGGCGTCTGAATATCTGTTGTAATATATCAGTTATCAAGCTTCATTAAATATGC
TGCCTCCACGCCCCAGCGGGTTGCCTCCGTCCTTATTTCTTTCCTCTTCAGACACCAGAG
CATCAACTGGTAATCATGACCCTGGAATGAACTCTGATCAGAATCGTGAATCGCCTGCTG
AGAGTGCTAATTCAAGAGATACGTGGCCTGTAATTGATGCTGCTACTCAAGTGAAGCTTG
AGAATCAGAAAGCTGAGGATGGTTATTATGAACAGTCTGTGACTCACAGGCCTGCTAGTG
CAAATAAGGTTTCTCTTCTTGATATTGCTAGAGAACAAGTGGATATAATATCTGAAAAAA
TGTATTTGCTCCCCAATGAGTATTTAGAAGAGCTAAAAGGTAGGCTTCGAGGGATGCTTG
AAGGGAACGGTGGTCCTCAGCAAAGAGATGAACTTTTGTTTTTACAGAGGCTTGTTCAGA
CTAGGTCTGATTTGACTGCTAATACATTGATTAAAGCTCATCGAGTTCAGCTGGAAATTC
TTGTCGCTATTAATAGTGGAATTCAGTTTTTCCTGCATCATAGTATGAATCTTTCTCAGA
CTTGCCTGATTGAGGTTTTTGTATACAAAAGATGTCGGAATATAGCATGCCAAAGCCAGT
TGCCTGCAGAAGATTGCCACTGTGAGATATGCACCAACCGAAAGGGATTCTGCAGCCTTT
GCATGTGTGTAATCTGTAACAAGTTTGATTTTGAAGTGAATACATGTCGGTGGATTGGTT
GCGACTCCTGTGCTCATTGGACTCACACGGACTGCGCAATTCGTGATAAACAAATTGGAA
CAGGTCCTTCTTCTGTGAATGGGCTGGGGTCTGCTGAAATGCAGTTCAGGTGTAGAGCAT
GCAATCGCACTTCTGAGCTTTTTGGTTGGGTGAAAGATGTATTCCAACAATGTGCACCTA
CCTGGAATGGGGAATCATTGATAAGAGAACTAACTGTTGTAAGTAAGATCTTTCGACTGA
GTGAGAACACAAGAGGGAGGCAGCTGTTTTGGAAGTCTGAGGAGCTCATAGAAAAACTAA
AGGGTGGAGTGGCAGAGACAACAGCTTGCAGGATTATATTAACTTTTCTCCAAGAGCTTG
AGATGGACTCATCAAGGAGCTCTGAGGCTGGAAATAAAGAAAGGATGATTCCACCCCAGG
AGGCATGCAACCGAATTGCTGCAGTGGTACAAGAAGCAGTGCAGACAATGGGAGTAGTGG
CTGATGAAAAATTGAGGATGCTAAAGAAAGCTCGCCAAGCTCTCGAGACATGTGATCATG
AACTGGAGGAAAAAGCTAAAGAAGTTTCAGAACTTAAACTGGAGAGGCAACGAAAAAGAC
TACAAATTGATGAATTAGAGAGCATTGCTAGGCTTAAAGAAGCAGAAGCAGATATGTTCC
AGCTCAAGGCAGATGAGGCAAGACGAGAAGCTGACAGGTTGCAGAGGATTGCTCTTGCAA
AATCAGGGAAATCAGAAGAAGATTATGCCAGTAGTTACCTTAAACAACGTCTTAGCGAGG
CTGAAGCTGAGAAACAATTCCTTTTCGAGAAGATTAAACTTCAAGATCAGAGTTCTCGTT
CATCACAAGGCAATGACATCGGTGACAGTTCACAAGAACTTTACTCTAAAATACAAGAGA
TCCTAAAGAGTGTGTAGAAATCCCAGTAAAGCCAGAGACAACCAGCCAAATGAACATCAT
TGTAAGTTGCCTGATCATTGTTCATGGTTTGTGTCATTTTAACTTAATACTTTAAATAAT
ACATTACCTAAAACCTTGTATAATTGATTAATTTTGCTTTTAAAGTACCACTGTATTGTT
GATTTGATCAACTGACTTTCGCCAGAAACAACACAATATCAACTCAAGACTGACCAGAAG
TATTAAAAAGCCTAGCATTCATGCAAAATTTTCCCAGGATTATATGTGAAATGAAATCTA
GGGCAGTTTCGGTGAGGTTAACCAAACCCATTATTTTTCGTTTTGAACTATGTATACATA
TGATTTTCCTTGACGTATACTTATAATAAGATCATACTCATTCTGACACAATTCTATATA
CTGTATCGTTGGATAGTATTGTCCAAACAGACGGTGCATGGAAGATCTCAAAATCAATGA
CGGAGTCTGTTTGGCACCTCCTAAATGGGCGTTCAAATTAGTCCAACCCCCAAAAGCTTA
ATTACGAGTTCGATAGAATTCAATTTTAACAAGTTCTACTTTTCCATTAATTATATAAAA
GAAATTATTTCATTAATATAATTTTTGACAATAATACTGACCAACTACATTATTGAGAAT
AGGATTGGGGGGCTACCACAGGCTACAGATGTCTGAGACATATTTATTAGATATAATAAT
ACTATATGATAAGACTAAAATGCATTATTCTTGTTACATTACATTTATGCTGATGAATTC
AATTTGTCGACATCCTTGTATTAGCATAATATCCCATTGGTTACAAGTTAACTAAAAAGC
TTTTTTTTAACATTTCGTGTTCGAGATTCACGTAGATCCAACTAATTAAGATTCACCTCA
AATTTATTTTGAAGAGTAAAGTATCGATACTCAAGACTTCCACTCGAATTCGTTAGGTTT
TTGATTGGGAGACATTAACAACCACTCAAAACAAACCGACATTCAACAATGCTACTTTGA
CCTTTTAACTTGCGTCTGACGAGAT