Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g047670.3.1
CDS Infomation

Pescadillo homolog (AHRD V3.3 *** K4CEX3_SOLLC)
Sequence

ATGCCGAAGCATTATCGGCCTGCTGGGAAGAAAAAAGAAGGAAATGCTGCAAGATATATT
ACAAGGTCACAAGCTGTGAAATATCTTCAAGTCAGTTTATCACTGTTCAGGAAGTTATGC
ATTTTGAAAGGTATTTTCCCCCGTGAACCAAAGAAGAAGGTTAAGGGAAACCACCATACC
TACTATCACACCAAAGATATTTTGTTCCTTAAACATGAGCCCTTACTTGAGAAGTTCAGA
GAAATGCGAGCATATGAGAAGAAGATTAAGAAAGCAGTCTCAAAGAAGAACCGGGATCTT
GCTGAACGCCTGCTAACTCGCAAGCCCAGTTATACCCTTGACATGCTTATTCGAGAGAGG
TACCCTAAATTCATTGATGCACTTAGAGATTTGGATGACTGCCTTAGTATGGTACACTTG
TTTGCTGCATTACCTGCTGTAGAGAGAGAGAAGATACCGGTAAACCGTGTCCATAACTGC
CGAAGGTTGGGTCATGAATGGCAAGCCTACATTGCTCGCACTCATAAACTAAGGAAAACA
TTTATATCCGTGAAAGGAATATATTACCAGGCAGAAATAGATGGGCAGAAAATCACTTGG
TTGACTCCACATGCACTGCAACAAGTACTTCCTGATGACGTTGACTACAACATCATGCTG
ACTTTCTTGGAATTTTACGAGACACTCCAAGCTTTTGTTAATTTCAAGCTTTACCATTCA
ATTAATGTAAAGTATCCTCCCATTCTTGATCCTCGGCTTGAAGCTTTAGCTGCCGATCTT
TATGCATTATCTAGGTACTTTGATAACAGAGCCTCCATGGCAGAGTCATCAACTACTAGC
TTCTCTGAAACTGATGTGAGTAAGGACCAAGTGGAGGGGCCAAACTATGACGAATCTGAA
CTTAGACTTGCTCAACTGCAACAACAGATTCCTTCCAATGAGCCAGGTGCATTAATGCAC
CTTGTTCAAAATGCTACGGAAACTGACGAAGATGATTCTGATACCAGGGAATGCAAAACA
CTTTTCAAGGATGTCAAGTTCTTCTTGAGTCGTGAGGTTCCCAGAGAGTCGCTGTTGTTT
GTCATCCCTGCTTTTGGTGGTAGCGTTTCTTGGGATGGTGAAGGGGCTCCATTTAAAGAG
ACTGACCAAAATATCACTCATCAGGTTGTTGACCGGCCAACACAGGGCCACAAATTCCTT
TCCCGAGAATATGTCCAGCCACAGTGGATTTATGATTGTGTTAATGCACGCATCCTTTTA
CCAGTTGAGGATTATATCGTGGGAAGGATCCCTCCACCACACTTGTCACCTTTTGTTGAT
AATGAGGCGGAAGGCTATGTTCCTGAATATGCAGAGACCATCAAGCGTCTACAGGCAGCT
GCAAGAAATGAAGTGCTTCCAATGCCAGGGGTGGGCAAAGAGGATTTGGACGACCCTCAA
AATTTACTCGTGGAAGGTGTCATCGACCGTGCTGAAGCTATTGAAGCTGCCACGAAAAAG
CGGAAGATGTCAGTTCTTCAGAAGCAATATCATGATGAATTGAAAAAAGAACTTCGAAGT
ACCCAAATTTCTACTGCTTCAGATGGGAATAAGGAGAGTGTTCCTGAGCACGTTGATGCT
GGAGAAGATTCTCTTCCAGATTTAAGTCAAATTTCCAAGGATGCAGACAGCATGTCCAAG
ATTGTCATGCCACGTAAAAAGCAGAAGCTACTAAAAGCTATGGAGATTGGCAAAGAGCGT
AAACAAGCTAGTGTTGATCGTTTGAAAGAGAGGAAGAGAAAGATTGAAGAGGGAAAGAAA
TCAGGGAAATAA

Peptide Sequence

PEP ID

Solyc07g047670.3.1
PEP Infomation

Pescadillo homolog (AHRD V3.3 *** K4CEX3_SOLLC)
Sequence

MPKHYRPAGKKKEGNAARYITRSQAVKYLQVSLSLFRKLCILKGIFPREPKKKVKGNHHT
YYHTKDILFLKHEPLLEKFREMRAYEKKIKKAVSKKNRDLAERLLTRKPSYTLDMLIRER
YPKFIDALRDLDDCLSMVHLFAALPAVEREKIPVNRVHNCRRLGHEWQAYIARTHKLRKT
FISVKGIYYQAEIDGQKITWLTPHALQQVLPDDVDYNIMLTFLEFYETLQAFVNFKLYHS
INVKYPPILDPRLEALAADLYALSRYFDNRASMAESSTTSFSETDVSKDQVEGPNYDESE
LRLAQLQQQIPSNEPGALMHLVQNATETDEDDSDTRECKTLFKDVKFFLSREVPRESLLF
VIPAFGGSVSWDGEGAPFKETDQNITHQVVDRPTQGHKFLSREYVQPQWIYDCVNARILL
PVEDYIVGRIPPPHLSPFVDNEAEGYVPEYAETIKRLQAAARNEVLPMPGVGKEDLDDPQ
NLLVEGVIDRAEAIEAATKKRKMSVLQKQYHDELKKELRSTQISTASDGNKESVPEHVDA
GEDSLPDLSQISKDADSMSKIVMPRKKQKLLKAMEIGKERKQASVDRLKERKRKIEEGKK
SGK*

Transcript Sequence

Transcript ID

Solyc07g047670.3.1
Transcript Infomation

Pescadillo homolog (AHRD V3.3 *** K4CEX3_SOLLC)
Sequence

TTTTTAATACCACGTTAATACATATTGTGTGAAAATATCTCCGAACTCCTATTAAAACCC
CAATTCTTTAGCAGCCCTAAAAAATCCCTTTGCCGCCACACTCCCCAGCCTGTTCGACTC
CATAGTCAGCAGCAGCCATGCCGAAGCATTATCGGCCTGCTGGGAAGAAAAAAGAAGGAA
ATGCTGCAAGATATATTACAAGGTCACAAGCTGTGAAATATCTTCAAGTCAGTTTATCAC
TGTTCAGGAAGTTATGCATTTTGAAAGGTATTTTCCCCCGTGAACCAAAGAAGAAGGTTA
AGGGAAACCACCATACCTACTATCACACCAAAGATATTTTGTTCCTTAAACATGAGCCCT
TACTTGAGAAGTTCAGAGAAATGCGAGCATATGAGAAGAAGATTAAGAAAGCAGTCTCAA
AGAAGAACCGGGATCTTGCTGAACGCCTGCTAACTCGCAAGCCCAGTTATACCCTTGACA
TGCTTATTCGAGAGAGGTACCCTAAATTCATTGATGCACTTAGAGATTTGGATGACTGCC
TTAGTATGGTACACTTGTTTGCTGCATTACCTGCTGTAGAGAGAGAGAAGATACCGGTAA
ACCGTGTCCATAACTGCCGAAGGTTGGGTCATGAATGGCAAGCCTACATTGCTCGCACTC
ATAAACTAAGGAAAACATTTATATCCGTGAAAGGAATATATTACCAGGCAGAAATAGATG
GGCAGAAAATCACTTGGTTGACTCCACATGCACTGCAACAAGTACTTCCTGATGACGTTG
ACTACAACATCATGCTGACTTTCTTGGAATTTTACGAGACACTCCAAGCTTTTGTTAATT
TCAAGCTTTACCATTCAATTAATGTAAAGTATCCTCCCATTCTTGATCCTCGGCTTGAAG
CTTTAGCTGCCGATCTTTATGCATTATCTAGGTACTTTGATAACAGAGCCTCCATGGCAG
AGTCATCAACTACTAGCTTCTCTGAAACTGATGTGAGTAAGGACCAAGTGGAGGGGCCAA
ACTATGACGAATCTGAACTTAGACTTGCTCAACTGCAACAACAGATTCCTTCCAATGAGC
CAGGTGCATTAATGCACCTTGTTCAAAATGCTACGGAAACTGACGAAGATGATTCTGATA
CCAGGGAATGCAAAACACTTTTCAAGGATGTCAAGTTCTTCTTGAGTCGTGAGGTTCCCA
GAGAGTCGCTGTTGTTTGTCATCCCTGCTTTTGGTGGTAGCGTTTCTTGGGATGGTGAAG
GGGCTCCATTTAAAGAGACTGACCAAAATATCACTCATCAGGTTGTTGACCGGCCAACAC
AGGGCCACAAATTCCTTTCCCGAGAATATGTCCAGCCACAGTGGATTTATGATTGTGTTA
ATGCACGCATCCTTTTACCAGTTGAGGATTATATCGTGGGAAGGATCCCTCCACCACACT
TGTCACCTTTTGTTGATAATGAGGCGGAAGGCTATGTTCCTGAATATGCAGAGACCATCA
AGCGTCTACAGGCAGCTGCAAGAAATGAAGTGCTTCCAATGCCAGGGGTGGGCAAAGAGG
ATTTGGACGACCCTCAAAATTTACTCGTGGAAGGTGTCATCGACCGTGCTGAAGCTATTG
AAGCTGCCACGAAAAAGCGGAAGATGTCAGTTCTTCAGAAGCAATATCATGATGAATTGA
AAAAAGAACTTCGAAGTACCCAAATTTCTACTGCTTCAGATGGGAATAAGGAGAGTGTTC
CTGAGCACGTTGATGCTGGAGAAGATTCTCTTCCAGATTTAAGTCAAATTTCCAAGGATG
CAGACAGCATGTCCAAGATTGTCATGCCACGTAAAAAGCAGAAGCTACTAAAAGCTATGG
AGATTGGCAAAGAGCGTAAACAAGCTAGTGTTGATCGTTTGAAAGAGAGGAAGAGAAAGA
TTGAAGAGGGAAAGAAATCAGGGAAATAAGCAAAAGCAACAAGTGTCGTGATCTGAAATT
GTTCGCTGTGCTGTTTATCGTTTTTTCCTTTTTGGATTATTAGTTCTTTCTACAATATTG
TATATTTTTGCCAATTTGGCTAAAGTTTTGCTAATCGTAGGTGTGTTATGTTTTATTAGT
ATTGTACGTCTTTTGAGTACCATTTCTTAGCAGCTTAATACATACACCTTGTTCCTGGAT
ATGCTAGACAATATTAATGATTTAATTGTGTTGTTAATGGATGAAGAATTTTCA