Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g045410.2.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 - B9IFK4_POPTR)
Sequence	ATGCGTGAAGCAAATGTTACGTTTAATGCCCTTACGTATACTAGTATGGCGGATGCTCAT TTTAGAGAGGGGAATGTTAGTGATGCCAAGGAAGTATTGGCTGAGATGGAAGAGAAGGGT CTTTGTTCAAGTAATTTTACCTACAAGTTTTTGATGAAGGGTTTGTTTAGAGCTGGGTAT GTGGATGAGGCAATTGAGGTTAAAAAAAGTATGTTTGCCAAGTCGTTAGTCCCTAATCGA TATTTTTATGCCACATTTATTGATGGGCTTTGTGCTGCCAATAGATTTAGAGAGGCAATA ATGGTATTAGCTGAGATGTCTGAGATGGGAGTGAAGCCTGATGCAAAGGTTTATGAAGCT TTACTTGATTGTTACTTGAGACATGATGATGTGGATGAGGCTTTTAAAATTAAGGATGCT AAAGGCATCACTTTAGCCCTGTGCAATACGCTTCTTCGTGTGCTCTGCAAGTGTGGTAAG ATGGAGAAGGCAAATGAACTTGTGGATGAGATGACTAGAAAAGGTATCAAGCCTGGTTCG ACAACTTATGCCTTGTTGATTGAGGGACATTGTCAATGGGATAATGTTGCCACTGCCTTG GAGCTTCTTGAAGAAATGAAGAAGAAAAATCTGGCCTCTGTTGAGTCAACCTATTGTATG ATAACTGATTGTCTCTGCCGCAATAAGGATCCAAACACGGCTATGTCTTCTCTTCCAAAC TTGATAATGAAGAAAGGGAAGCGAAATGCTCATACGTGGAGAACTTTATTGATGAATTAT CCTGGTAAAGGTCACTTACTGAAGTTGAGGGGGGTTGTGGAGGCAATGCATAAGCATGGT ATTGTGCCATCTACTTCCCATTACAATATTCTTATAAAGGGACTCTGCGAGACGCGGAAG ATGAAAGCTGCTCAAAGTTGCTTGGTTGAAATGGTGGATAAAGGCCTAAACCCTGACCAG GGTACTTATGAACCCTTTATTATTGGATATTGTCGAAAAGGGCAGTTGCAAAATGCGGAA AGATATTTATTGCAGATGCTGCATCATGGGTTTAAGCCCACAGAAGAAGTTTATAGTGCT TTGATTAGTGCGAACTGTAAAAGTGGTTAG

Peptide Sequence

PEP ID	Solyc07g045410.2.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 - B9IFK4_POPTR)
Sequence	MREANVTFNALTYTSMADAHFREGNVSDAKEVLAEMEEKGLCSSNFTYKFLMKGLFRAGY VDEAIEVKKSMFAKSLVPNRYFYATFIDGLCAANRFREAIMVLAEMSEMGVKPDAKVYEA LLDCYLRHDDVDEAFKIKDAKGITLALCNTLLRVLCKCGKMEKANELVDEMTRKGIKPGS TTYALLIEGHCQWDNVATALELLEEMKKKNLASVESTYCMITDCLCRNKDPNTAMSSLPN LIMKKGKRNAHTWRTLLMNYPGKGHLLKLRGVVEAMHKHGIVPSTSHYNILIKGLCETRK MKAAQSCLVEMVDKGLNPDQGTYEPFIIGYCRKGQLQNAERYLLQMLHHGFKPTEEVYSA LISANCKSG*

Transcript Sequence

Transcript ID	Solyc07g045410.2.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 - B9IFK4_POPTR)
Sequence	TCGTTAACCAACAAAAAATAAAAATAAAAAAACAACTTATGGAAACCCAAACTTTTAACT AATTCGGAATTGCAATTCTAGGGTTCAATAACATTTGACTTCTTCTGCCCAGTTATAGCC AACCTACTCCATTCGCCATTGTTGATGTTTTGCTGCACTCTGTTTTCAGCTGAAACAGAG TATAAAACAGAAACCCATCTTCCAAATCCTCCATAGCCATTGAAAAATCTTCAGAAAACT ATGTGGAGGATTTTTCATGGAAGAATCACAAGATGTATTGAACAAGCTACATTTCACAGA CATTACTTCAATTCTCATCTTCCACAGAACAATCTAATCTTGGTTCAAGAACTCACTGAA ATTCTCAAAAACAAGAAATGGAAAAGCCTCATTAAACTTGCAAGCTTAAAAAATAAGCTA AACCCGTATGTGGTTCGGTCTGTTCTTCATCAAGATCAATTGAGTTTGGTTTGCCCCCTT TGGAAGTTTTGAAATTTTTTTATAATTGTCGTAAAAAGTTTGATGAATCGAGAAAATTTG ATCATGTCGTATTTGGGTTGTTGATGGATAAGTATAGGGAGAAAGGGTATTTGTTTGAAG CTGCTAGTGTTGTTTTTGCTCATAGTAATGATCTTGATTGTATCCCTAGCTTGTTGTATT GTAATAGTTTGTAAACGGATCTGTTGAAAGATGGTAACTTTAGATTGTTTTGGCGAGTTT GTGATGCAATGCGTGAAGCAAATGTTACGTTTAATGCCCTTACGTATACTAGTATGGCGG ATGCTCATTTTAGAGAGGGGAATGTTAGTGATGCCAAGGAAGTATTGGCTGAGATGGAAG AGAAGGGTCTTTGTTCAAGTAATTTTACCTACAAGTTTTTGATGAAGGGTTTGTTTAGAG CTGGGTATGTGGATGAGGCAATTGAGGTTAAAAAAAGTATGTTTGCCAAGTCGTTAGTCC CTAATCGATATTTTTATGCCACATTTATTGATGGGCTTTGTGCTGCCAATAGATTTAGAG AGGCAATAATGGTATTAGCTGAGATGTCTGAGATGGGAGTGAAGCCTGATGCAAAGGTTT ATGAAGCTTTACTTGATTGTTACTTGAGACATGATGATGTGGATGAGGCTTTTAAAATTA AGGATGCTAAAGGCATCACTTTAGCCCTGTGCAATACGCTTCTTCGTGTGCTCTGCAAGT GTGGTAAGATGGAGAAGGCAAATGAACTTGTGGATGAGATGACTAGAAAAGGTATCAAGC CTGGTTCGACAACTTATGCCTTGTTGATTGAGGGACATTGTCAATGGGATAATGTTGCCA CTGCCTTGGAGCTTCTTGAAGAAATGAAGAAGAAAAATCTGGCCTCTGTTGAGTCAACCT ATTGTATGATAACTGATTGTCTCTGCCGCAATAAGGATCCAAACACGGCTATGTCTTCTC TTCCAAACTTGATAATGAAGAAAGGGAAGCGAAATGCTCATACGTGGAGAACTTTATTGA TGAATTATCCTGGTAAAGGTCACTTACTGAAGTTGAGGGGGGTTGTGGAGGCAATGCATA AGCATGGTATTGTGCCATCTACTTCCCATTACAATATTCTTATAAAGGGACTCTGCGAGA CGCGGAAGATGAAAGCTGCTCAAAGTTGCTTGGTTGAAATGGTGGATAAAGGCCTAAACC CTGACCAGGGTACTTATGAACCCTTTATTATTGGATATTGTCGAAAAGGGCAGTTGCAAA ATGCGGAAAGATATTTATTGCAGATGCTGCATCATGGGTTTAAGCCCACAGAAGAAGTTT ATAGTGCTTTGATTAGTGCGAACTGTAAAAGTGGTTAGAACTTCATGGCAAGGATCTGGT CCGCTGATGTTTCATACTAAGAAGCTCTCATATCCATTTACCCTTTACAAGGAATCGCAC AACTGAGGGTTTTGAGGTCAGGGTATGTAACATACAGCTGACATGTCTCCTGTGGGCTGA AGTGCTTCAAGATCAATAAGCCCTTGCATAACCTGTGTACACATAATATTTCTCTTATTA ATATACACAGAATTAGCTCTCTCTACTCCAAAATATTTTAATGCAAAGCACAATAATGCT TCTGGCCACCAGATACAAAGAGATGGATTCAATTGTTTCTTCTGAGTTTTAAATGCCGCA ACAATGATAACAAGTGGAAGGGGAATTTACAATCAATATTTGTCTTGCTTTGAGGCAGGT GACAGGTGGTAAATGCAAGTGGAGCATGAGGAAAAAGGTTGATTGTCTTATAAGATTTGC TCTCCAAGAGAGTCAAAAGCTGAAAGTAACTAGCTAGAGTAAGTCGAATACATCTAATCA CTTCTATATCATCCTTCACTGCACAACTTACCCTAAATACAACAACTTTATGAATCTCTC TTGCATTGTAAGTACATTACTGAGAATCTTTTTGATAAATTAAAATTATTTCAGAGAATT ACAATATTGTCAATTGTTGAAAATGGAAGGAGAATGTTTTCTACTTGAGATGACACAATC ACACAAAAGTATTTATTTTGGGTTTTGCTTAGAAAGAATTTTGACCTCAAATGTTTAGTT GATCATTAATTACATTTGGACCAAGTTATGGCCTATGGCTATGTTAAACCTGAAAGAATG AAGAACCTAAGCATACCTCTTGATGGAGACAGCAGGATAACAACACACTCAGAAAAAATA AAGAATTTCAATAAATATGAAGAAAATAGTGTGTATTGGGACCATAACGGTAGCAGGTAT ATTTGCACCAGCTTGTACTAAGACTACTGTAGCACAACGCATTTGGTTCCTAATTGTGCT ACTACAAACTACAAAAAAGAAACACTAGCCTGACCTTTTTTGCATCCTTTTCGTAGACAG AATAAAAAAGTCCCAGCAACCTCTCTCTTGTGAAATTCTT