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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g045310.3.1
CDS Infomation

Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (AHRD V3.3 *** W9QMR3_9ROSA)
Sequence

ATGGCGGAAGTTACTAAAATTCTCCAACCAGTTCTTCTTCCTCCTTTCTTCCATAAACTA
GACGGAACCACTAATTCCCATTTTAGATTGTGTAGAAGAAACAGACGCAACATCAGTATC
CGTTGTTCTTCAATTTCTACAACTGAAACTAACAAATCCACAAAGACTCAGAACATTCCA
TGGGGTTGCGAGACTGATTCTATAGAAAATGCGTCCAATTTGCAGAAATGGTTGACGGAA
TCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAGAGTGAATGTTGGAGAAAGAGGACTT
GTTGCTAACAACAATATTAGGAAAGGGGAAAGGCTGCTTTTTGTTCCTCCTTCACTTGTC
ATCACTGCTGATTCGAAATGGAGCAATTCAGATGCTGGTGATGTTTTAAAACAATATAAT
GTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTCATGAAGTCT
TCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTCTTATACTGG
ACTCAATCGGAGTTAGATAGGTACTTGGAAGCATCACAAATAAGACAGCGGGCGGTTGAA
AGGATAAATAACGTCATTGGAACGTACAATGACTTAAGGCTCAGAATATTTTCCAAGCAT
CCTGATTTATTTCCTGAAGAGATATTCAACATAGAGACTTTCAACTGGTCATTTGGAATT
CTCTTCTCACGTTTGGTCAGGTTACCCTCTATGGATGGAAGAGTTGCGTTGGTTCCTTGG
GCAGATATGTTGAATCATAATTGTGAGGTGGAAACATTTCTTGACTATGATAAATCATCG
CAAGGAATCGTCTTTACAACAGACAGGGCATATCTGCCAGGTGAGCAGAGATTACCATAG

Peptide Sequence

PEP ID

Solyc07g045310.3.1
PEP Infomation

Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (AHRD V3.3 *** W9QMR3_9ROSA)
Sequence

MAEVTKILQPVLLPPFFHKLDGTTNSHFRLCRRNRRNISIRCSSISTTETNKSTKTQNIP
WGCETDSIENASNLQKWLTESGLPAQKLDLQRVNVGERGLVANNNIRKGERLLFVPPSLV
ITADSKWSNSDAGDVLKQYNVPDWPFIATYLISEASLMKSSRWSNYISALPRQPYSLLYW
TQSELDRYLEASQIRQRAVERINNVIGTYNDLRLRIFSKHPDLFPEEIFNIETFNWSFGI
LFSRLVRLPSMDGRVALVPWADMLNHNCEVETFLDYDKSSQGIVFTTDRAYLPGEQRLP*

Transcript Sequence

Transcript ID

Solyc07g045310.3.1
Transcript Infomation

Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (AHRD V3.3 *** W9QMR3_9ROSA)
Sequence

ACTCAACTCTTCTACTTATCTATCAATGGCGGAAGTTACTAAAATTCTCCAACCAGTTCT
TCTTCCTCCTTTCTTCCATAAACTAGACGGAACCACTAATTCCCATTTTAGATTGTGTAG
AAGAAACAGACGCAACATCAGTATCCGTTGTTCTTCAATTTCTACAACTGAAACTAACAA
ATCCACAAAGACTCAGAACATTCCATGGGGTTGCGAGACTGATTCTATAGAAAATGCGTC
CAATTTGCAGAAATGGTTGACGGAATCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAG
AGTGAATGTTGGAGAAAGAGGACTTGTTGCTAACAACAATATTAGGAAAGGGGAAAGGCT
GCTTTTTGTTCCTCCTTCACTTGTCATCACTGCTGATTCGAAATGGAGCAATTCAGATGC
TGGTGATGTTTTAAAACAATATAATGTACCAGATTGGCCTTTTATTGCTACATATTTAAT
AAGTGAGGCAAGCCTCATGAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAG
GCAGCCTTACTCTCTCTTATACTGGACTCAATCGGAGTTAGATAGGTACTTGGAAGCATC
ACAAATAAGACAGCGGGCGGTTGAAAGGATAAATAACGTCATTGGAACGTACAATGACTT
AAGGCTCAGAATATTTTCCAAGCATCCTGATTTATTTCCTGAAGAGATATTCAACATAGA
GACTTTCAACTGGTCATTTGGAATTCTCTTCTCACGTTTGGTCAGGTTACCCTCTATGGA
TGGAAGAGTTGCGTTGGTTCCTTGGGCAGATATGTTGAATCATAATTGTGAGGTGGAAAC
ATTTCTTGACTATGATAAATCATCGCAAGGAATCGTCTTTACAACAGACAGGGCATATCT
GCCAGGTGAGCAGAGATTACCATAG