Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g045230.3.1
CDS Infomation	Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Sequence	ATGAGCAACAGTGGTATAGTTGGGGGATTAGCTAGGGTTTCAATCCCTTCTGGTATGCGA AAGACGATCCAAAACATCAAAGAGATCACTGGAAATCATGGTGAAGATGAGATATATGCA ATGCTCAAGGAATGTTCTATGGATCCCAATGAGACTACTCAGAAGCTTCTTTCACAGGAT ACATTCCATGAAGTTAAAAGCAAGCGTGATCGGAGAAAAGAGAATTCAATTAAGGAGTCT GCTGAACCAAAGTGGAAACCAGGCATGCAGGGCAGAGGTAACAAAGGGATTCGTGGAAAT TTGACTTCTCGTCATGCTTCACATGATGTAGGTGGTGGAAAGAATGGTCAAAACAATATT GCCAATCAAATTCTTGACAAGAGTGTCAACTTATCTACTGTGGTTGATGTTGAGGCTAAG AATATTTCAAGCTCATCAAGTGCTGCAGTAAATGGACCTAGCGATCTAGCTTCGGGGAGT AACAGTATCATACAAAATGCTCATGCTTCCCCAAAAAGAGAAGTTAAACAATTTGAAGCA AATACAGGCATGCAGACAACTTCTGCTGATTCCACCAAAAACAGATCAGCTACAGGAAAC AAAGATGTGCATGGTCAGCGGATGCCAAACACCGGCAATTCTTCAAGAATGCTATCTTCA CCATCTCCAACAGGAGCTTATCTCTCAGCTTCAGATCCCGTGCTCTTGCCATCTCAAAAT TCACGTCCCGCTGGTGTAGTAGGCACAGTTAGAAGGGAAGTTGGGCCCCAGTATTCTGGG GTTGAGCATGTTTCTCCTAAATCCAATGGGAGCAAAAAGACAACTGTAGCAGTTTCTACT GTTGGAAGCTCAAATATCCAAGTAAAGACGCCAAGCAAATTTCAGGGGCCTGGAAAGAAT CAACTTCCGGAGTACTCGCAAACTGCTTCTTCAACCCATAGTGGTTCTTCCTCCAGTAGG CCGTCATCTAATTACAACAATCGGTCACACACAGTTGGTCCACTAAAAGGTCCTTTTAAG GAGTGGAAGCCAAAGCCTGTAAACAGTAATCTAGCTCAGGGGTCTACTCTTGCTGCTGCT GCTTCTTCATCTGGTGTGTCTACGGTTTCTGTTGAAGTCAATACTCTGTCGCAGGCTCCT GCTTCTGTTCCTGAAACAAAAGAAGTCACTGAGGATCTGCAGAAGAAGTTGGAGAAATCA CACATTTCAGATGTTGAAAATGTTATTATCCCTAATCACCTTCATGTTCCTGAGTCTGAA AAACTTGGGTTCTGTTTTGGAAGCTTTGACTCTGGCTTTAGTTTGGGCACAAGCACAAAT ATTGCTCCTGAGCATGATGGAAGTCCACCACTTTCTGAATCTTCTGAGAGCATTGAAGAA GCTGCAAGTGCGCAACTTCCAAGTAATCAAAATGCATCAGCTGCTGCAGAGGAAACAGAT TATCCTGATCAGCCTCCATCTTCACATGGACAGGAGAGTTTGCCTGCAAAAGGAGATGGT AATATCTCATCCTCTGCTCCAGAGTGCAGTGAACCAAAGCAGGAGAGTCTGCCGGCGGGC CAACAATATTCAGTTGTTCATACATCCCCCAACTATAATTTTGGATTTGCGCCACCAATG TTGACCAATCAGCTCCCACCCTTTGAAAATTCTGAATCTCAACCTCGAGATGTTTCTCGT CTTCCAAATTTCCTTGTTCAGCATCCGATTGACCCAAGCTACTATCCCCACTTCTACCGT TCAAGTGCTGATAGTGATGGCCGCATTTCACCCTTCCATTCAGCAGGTGTTTCTACCCAG TACAATGTTGCAGTTGGGCCTCCACACACTTCTCAATCTCCTCAAGAGGGTGGGAATAGT CCTGCTTTATCTGCAGCAGCTCCAACTCCACTTGTGACTCAAGCTGCTGGGCTTATGCAG AGTTCTATAGCTGTACCTCAGCAACCTATCCCCGTATTTCGACAGGCTACAGGGATGCAT CTGCCCCATTATCCTCCAAATTTCATTCCATACGGTCACTACTTTTCACCATTCTATGTT CCACCAGCAGCCATCCATCAATTTTTAAGCAATGGTGCATTTTCCCAGCAGCCTCAGGCT GGTGGTATATATCCACCTCCACAATCAGCTGTTCCCAGATACTCACTTTCGCAATATAGA CCAGGAGCTAATGTTGGAAATCCAGCTCACATGGGAGTGCCTGGCACTTATGCGCCATAT GGATCCTCTCCTGTCAACTATAACCCTAGTTCATCTACAACGACTGGAAACCCTGCTTCC AACGAGGATCTTTTTGCATCTCAGTTCCAGGAGAGTAATGTCTATGTGAGTGGACAACAG AGTGAAAGCTCAGGTGTGTGGATTAATGCGCACAATAGAGATTTATCTAGTTTGCAAGCA AGTTCGTTTTATAATCTTCCTCAGGGTCAAGTGGCTCTAACACCCACTCAACCAGGTCAT GGAACTTTTGCTGGTGTTTATCACCCAGCTCAACCAGTTACAGCATCAACTGTTCATCCA CTTCTGCAGCAGTCCCAAACAATAGCTGGTCCAGTTGATATGGTTGGACCAACCGGCAAT GTTTATCAACGGCCTCAGCATGCACAGATGAACTGGCCAAGTAGTTATTGA

Peptide Sequence

PEP ID	Solyc07g045230.3.1
PEP Infomation	Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Sequence	MSNSGIVGGLARVSIPSGMRKTIQNIKEITGNHGEDEIYAMLKECSMDPNETTQKLLSQD TFHEVKSKRDRRKENSIKESAEPKWKPGMQGRGNKGIRGNLTSRHASHDVGGGKNGQNNI ANQILDKSVNLSTVVDVEAKNISSSSSAAVNGPSDLASGSNSIIQNAHASPKREVKQFEA NTGMQTTSADSTKNRSATGNKDVHGQRMPNTGNSSRMLSSPSPTGAYLSASDPVLLPSQN SRPAGVVGTVRREVGPQYSGVEHVSPKSNGSKKTTVAVSTVGSSNIQVKTPSKFQGPGKN QLPEYSQTASSTHSGSSSSRPSSNYNNRSHTVGPLKGPFKEWKPKPVNSNLAQGSTLAAA ASSSGVSTVSVEVNTLSQAPASVPETKEVTEDLQKKLEKSHISDVENVIIPNHLHVPESE KLGFCFGSFDSGFSLGTSTNIAPEHDGSPPLSESSESIEEAASAQLPSNQNASAAAEETD YPDQPPSSHGQESLPAKGDGNISSSAPECSEPKQESLPAGQQYSVVHTSPNYNFGFAPPM LTNQLPPFENSESQPRDVSRLPNFLVQHPIDPSYYPHFYRSSADSDGRISPFHSAGVSTQ YNVAVGPPHTSQSPQEGGNSPALSAAAPTPLVTQAAGLMQSSIAVPQQPIPVFRQATGMH LPHYPPNFIPYGHYFSPFYVPPAAIHQFLSNGAFSQQPQAGGIYPPPQSAVPRYSLSQYR PGANVGNPAHMGVPGTYAPYGSSPVNYNPSSSTTTGNPASNEDLFASQFQESNVYVSGQQ SESSGVWINAHNRDLSSLQASSFYNLPQGQVALTPTQPGHGTFAGVYHPAQPVTASTVHP LLQQSQTIAGPVDMVGPTGNVYQRPQHAQMNWPSSY*

Transcript Sequence

Transcript ID	Solyc07g045230.3.1
Transcript Infomation	Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Sequence	GCCCTTATATTTCACCAGAAAAATATATCACTCTCTGTTTCCTCCCTCTCCCTTTCTCTC TGTAGATTCAGTGATACATATATACAGAGAGACATATAGTTGGGGTATATACTAAAGTAG AGAATATTAGCGGGGTTGTAGTCTTTGGGGTGGTGAAGATGAGCAACAGTGGTATAGTTG GGGGATTAGCTAGGGTTTCAATCCCTTCTGGTATGCGAAAGACGATCCAAAACATCAAAG AGATCACTGGAAATCATGGTGAAGATGAGATATATGCAATGCTCAAGGAATGTTCTATGG ATCCCAATGAGACTACTCAGAAGCTTCTTTCACAGGATACATTCCATGAAGTTAAAAGCA AGCGTGATCGGAGAAAAGAGAATTCAATTAAGGAGTCTGCTGAACCAAAGTGGAAACCAG GCATGCAGGGCAGAGGTAACAAAGGGATTCGTGGAAATTTGACTTCTCGTCATGCTTCAC ATGATGTAGGTGGTGGAAAGAATGGTCAAAACAATATTGCCAATCAAATTCTTGACAAGA GTGTCAACTTATCTACTGTGGTTGATGTTGAGGCTAAGAATATTTCAAGCTCATCAAGTG CTGCAGTAAATGGACCTAGCGATCTAGCTTCGGGGAGTAACAGTATCATACAAAATGCTC ATGCTTCCCCAAAAAGAGAAGTTAAACAATTTGAAGCAAATACAGGCATGCAGACAACTT CTGCTGATTCCACCAAAAACAGATCAGCTACAGGAAACAAAGATGTGCATGGTCAGCGGA TGCCAAACACCGGCAATTCTTCAAGAATGCTATCTTCACCATCTCCAACAGGAGCTTATC TCTCAGCTTCAGATCCCGTGCTCTTGCCATCTCAAAATTCACGTCCCGCTGGTGTAGTAG GCACAGTTAGAAGGGAAGTTGGGCCCCAGTATTCTGGGGTTGAGCATGTTTCTCCTAAAT CCAATGGGAGCAAAAAGACAACTGTAGCAGTTTCTACTGTTGGAAGCTCAAATATCCAAG TAAAGACGCCAAGCAAATTTCAGGGGCCTGGAAAGAATCAACTTCCGGAGTACTCGCAAA CTGCTTCTTCAACCCATAGTGGTTCTTCCTCCAGTAGGCCGTCATCTAATTACAACAATC GGTCACACACAGTTGGTCCACTAAAAGGTCCTTTTAAGGAGTGGAAGCCAAAGCCTGTAA ACAGTAATCTAGCTCAGGGGTCTACTCTTGCTGCTGCTGCTTCTTCATCTGGTGTGTCTA CGGTTTCTGTTGAAGTCAATACTCTGTCGCAGGCTCCTGCTTCTGTTCCTGAAACAAAAG AAGTCACTGAGGATCTGCAGAAGAAGTTGGAGAAATCACACATTTCAGATGTTGAAAATG TTATTATCCCTAATCACCTTCATGTTCCTGAGTCTGAAAAACTTGGGTTCTGTTTTGGAA GCTTTGACTCTGGCTTTAGTTTGGGCACAAGCACAAATATTGCTCCTGAGCATGATGGAA GTCCACCACTTTCTGAATCTTCTGAGAGCATTGAAGAAGCTGCAAGTGCGCAACTTCCAA GTAATCAAAATGCATCAGCTGCTGCAGAGGAAACAGATTATCCTGATCAGCCTCCATCTT CACATGGACAGGAGAGTTTGCCTGCAAAAGGAGATGGTAATATCTCATCCTCTGCTCCAG AGTGCAGTGAACCAAAGCAGGAGAGTCTGCCGGCGGGCCAACAATATTCAGTTGTTCATA CATCCCCCAACTATAATTTTGGATTTGCGCCACCAATGTTGACCAATCAGCTCCCACCCT TTGAAAATTCTGAATCTCAACCTCGAGATGTTTCTCGTCTTCCAAATTTCCTTGTTCAGC ATCCGATTGACCCAAGCTACTATCCCCACTTCTACCGTTCAAGTGCTGATAGTGATGGCC GCATTTCACCCTTCCATTCAGCAGGTGTTTCTACCCAGTACAATGTTGCAGTTGGGCCTC CACACACTTCTCAATCTCCTCAAGAGGGTGGGAATAGTCCTGCTTTATCTGCAGCAGCTC CAACTCCACTTGTGACTCAAGCTGCTGGGCTTATGCAGAGTTCTATAGCTGTACCTCAGC AACCTATCCCCGTATTTCGACAGGCTACAGGGATGCATCTGCCCCATTATCCTCCAAATT TCATTCCATACGGTCACTACTTTTCACCATTCTATGTTCCACCAGCAGCCATCCATCAAT TTTTAAGCAATGGTGCATTTTCCCAGCAGCCTCAGGCTGGTGGTATATATCCACCTCCAC AATCAGCTGTTCCCAGATACTCACTTTCGCAATATAGACCAGGAGCTAATGTTGGAAATC CAGCTCACATGGGAGTGCCTGGCACTTATGCGCCATATGGATCCTCTCCTGTCAACTATA ACCCTAGTTCATCTACAACGACTGGAAACCCTGCTTCCAACGAGGATCTTTTTGCATCTC AGTTCCAGGAGAGTAATGTCTATGTGAGTGGACAACAGAGTGAAAGCTCAGGTGTGTGGA TTAATGCGCACAATAGAGATTTATCTAGTTTGCAAGCAAGTTCGTTTTATAATCTTCCTC AGGGTCAAGTGGCTCTAACACCCACTCAACCAGGTCATGGAACTTTTGCTGGTGTTTATC ACCCAGCTCAACCAGTTACAGCATCAACTGTTCATCCACTTCTGCAGCAGTCCCAAACAA TAGCTGGTCCAGTTGATATGGTTGGACCAACCGGCAATGTTTATCAACGGCCTCAGCATG CACAGATGAACTGGCCAAGTAGTTATTGAGGAGCTATTCTTTTGTTCGCAAAGCATAAAA CAAGAAGAGAAAATTGTCATTGGAGTTTTTAGAGTTGCAACATGTTTTGATGTGGAGGAA TGGTTCCAGCAAATGTTGGGAAGAAGTGTGCAGTCTAACTGTAAATTAAGAAGGGTGTGA CATAGAAGAGAACTTCACCAAAGGTCTCTTCTTTGCTTGGACTGAGGATTTAAATGGTGA ATCCTCCTGTAACTGATAGTGGCAGATTTTAGTTGAGGCAGTTATATGCCGATTGGTTTT GTTTACGACTTTATAGCCTTATATAGTTTGAACATTTTGGTAGAATAACCATCAGAGGTT AAACCTTTTTCTTCCCTATATATTTCTTCCTTTTGATAGGATTTTAGGTCTCTCGAAAGC AATGAGGTTTCTTGGTTTTTTTTTTCATACATCCTGCTTTCGTTCGTATCTTTGTACCTG TAAATTGATTTTAGAGGAACTGTTGTAATTGGTGATTGGTGCAAAGAAAAATGCAGCGTT ATTTGCAGTAAATTTTGTGGTGAACAATTCACTGTTAGTCTTGGCACTCTGGGAATGCAG TGCCAGAAAGGGTCTGCAGAAGACAGAAAATATGAACTGTCTTCCTATTTGCATTGTTTT CGTATAATGAAATGTTTGTTTGTGTCTTTGTGAG