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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g045150.3.1
CDS Infomation

period circadian protein (AHRD V3.3 *** AT3G07640.1)
Sequence

ATGAAGGTAGCCCCAAAAGTAATACTACTCTTCAGAGATCCAACCGGCTTCGGCACCGCC
ATCTTCGAAGCTCTTCAACCAAACCCTAAATCCAACCTTCAAAAGCGACAAGAATCGCTC
GATTTATCCTTACAACATTACGGAATTAAAGATCAAAAGGTTTCGGTTGAAGTCGTTCAT
TTTCTCAATGGAGCAAATCTCGAGGTGTCTCTGTTACTACTGGAAAACTATGAGCCTCCA
ACACTTGCTTGTGCACTCAATGAAGTTCTGGCTTTGTTAGTAGGAGATGGGTTGTCAAAT
ATGCCCACAATTGTAGCCCCTTTTGTTGTGGCTGCATCTAAGCTTAAGATGGAAAATAGA
ACTTCTGTTTCAATTGACAATAGATCAGTTTATGGGTTGCAAGTAGGTGCCTCTAGTGAC
CTTACTAAAGCTTTGTGCACAAATTTGCAAAGCCCTCCCCCATCGTTGCAGATTTGTAAC
GAACAGTTGGCCTGCCTACTTCAATTGGTTCGAGTCCTGAAGATGCCTACTTATGTTATA
ATTGGCAAAAAAGGTCAAAATTTGCATCGTAAGACTTCGGAAGAGGAACACGAGGTGATA
CATGAGATAGGACAGCATTTGGCTAGCTTCTCATCTCTTAGTTTTTCAGGAGAAAAGATA
GCCTGGGATGCAACAAAGTCTTCGAAAGAAACTCAAGAGCCTTGGCGTGCATTATATGGT
TGA

Peptide Sequence

PEP ID

Solyc07g045150.3.1
PEP Infomation

period circadian protein (AHRD V3.3 *** AT3G07640.1)
Sequence

MKVAPKVILLFRDPTGFGTAIFEALQPNPKSNLQKRQESLDLSLQHYGIKDQKVSVEVVH
FLNGANLEVSLLLLENYEPPTLACALNEVLALLVGDGLSNMPTIVAPFVVAASKLKMENR
TSVSIDNRSVYGLQVGASSDLTKALCTNLQSPPPSLQICNEQLACLLQLVRVLKMPTYVI
IGKKGQNLHRKTSEEEHEVIHEIGQHLASFSSLSFSGEKIAWDATKSSKETQEPWRALYG
*

Transcript Sequence

Transcript ID

Solyc07g045150.3.1
Transcript Infomation

period circadian protein (AHRD V3.3 *** AT3G07640.1)
Sequence

ATTCCATTTTATTGCATTGCAGAAGAAGAAATGAAGGTAGCCCCAAAAGTAATACTACTC
TTCAGAGATCCAACCGGCTTCGGCACCGCCATCTTCGAAGCTCTTCAACCAAACCCTAAA
TCCAACCTTCAAAAGCGACAAGAATCGCTCGATTTATCCTTACAACATTACGGAATTAAA
GATCAAAAGGTTTCGGTTGAAGTCGTTCATTTTCTCAATGGAGCAAATCTCGAGGTGTCT
CTGTTACTACTGGAAAACTATGAGCCTCCAACACTTGCTTGTGCACTCAATGAAGTTCTG
GCTTTGTTAGTAGGAGATGGGTTGTCAAATATGCCCACAATTGTAGCCCCTTTTGTTGTG
GCTGCATCTAAGCTTAAGATGGAAAATAGAACTTCTGTTTCAATTGACAATAGATCAGTT
TATGGGTTGCAAGTAGGTGCCTCTAGTGACCTTACTAAAGCTTTGTGCACAAATTTGCAA
AGCCCTCCCCCATCGTTGCAGATTTGTAACGAACAGTTGGCCTGCCTACTTCAATTGGTT
CGAGTCCTGAAGATGCCTACTTATGTTATAATTGGCAAAAAAGGTCAAAATTTGCATCGT
AAGACTTCGGAAGAGGAACACGAGGTGATACATGAGATAGGACAGCATTTGGCTAGCTTC
TCATCTCTTAGTTTTTCAGGAGAAAAGATAGCCTGGGATGCAACAAAGTCTTCGAAAGAA
ACTCAAGAGCCTTGGCGTGCATTATATGGTTGAATCTTAATGCTGGCCATAATCAGCGTC
TAACATGGCGTCGTGTTATTGATTTCAGTATGCTCCTAAGGTAGGAGTTCCAGCAGATGT
GTGGGTAAGCACAATTGTGTGTGGTGTATGAACCCAGAGAGACGCCAATATTTCCTCGAG
GCAGACGAAGACGCCAATGTAAAGCTTCTTTGTTCCATTCTCAATTTTCTTTCTTGTATC
CCATGGCATCTGTTGCTTAACCAGTAAAATCCTCGATGTTTTTTTAATATTAGTCAAATA
TAAACCATACAACTCTTAATTATTCTTATTAACCTTTATATTATATAAATAGAGACCATA
TATATACGATCAGATACTCTTTTTTCTTCTTTACCAGTGGTTTGTACAATTGCATTCTCT
TCGAAATTCTAAGGATTCACATTAATTGATTAAGGGGAGAATATTTGCTCTCTATTTTCT
GCTGAAGCCTGGACCTTGTTGATAACATAACCATAACAATATATTTAGTGTAATTTTTAT
GTATTAATTTGCTATTTAGTGTAACTTT