Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g045100.1.1
CDS Infomation

LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G59080.1)
Sequence

ATGGTGACAAAGTTTCATTTTTTCAATTTGTTGTTCCTGTTCTTGTTTTCATCTGGTTGT
GCGGTGGCATCTGGAGGATTTTACAGTTTTAGAAATATGAATTCGAGTGTTTCTGGGATT
GTATTACCTGAGCATCCAAGCTTCAATGGTGTTTCTTCTTCTGCAAACTCAGATTGCAAC
TATGGGGTTTCTGAGAAATCAACAACTCATTCAATAGCTCAAGAACTAGATGGGTCTGAA
GATGTCTCAGATGTTTCTAACCAGCAAAAAGAGGAATCTGTCAAGTTTCATTTAAGGCAC
AGATCAGAAAAAATTGAGGCTGAAGACTCAGTTTTTAGGGATTTGAGTAGGATTCAGACA
TTGCATACAAGGATTGTTGAGAAGAAAAATCAGAATACTAATTCAAGACTTGCTAAAAGT
AGTGAAAAACATGAGATTGCTTCTGCTCATGCTCCGGTAGCCGCCGCCTCGCCGCCACTG
GAATCTCTGTCTTATGAGCTATCTGGGAAGCTCATGGCAACTTTGGAGTCAGGGGTGAGT
CTTGGTTCAGGAGAGTATTTCATGGATGTATTTGTGGGTACACCTCCTAAGCATTTTTCT
TTGATTCTTGATACTGGTAGTGATCTTAATTGGCTTCAATGTGTTCCTTGTTATGATTGT
TTTGAACAAAATGGCCCCCATTATGATCCTAAAGACTCTACTTCTTTTAGAAATATAAGT
TGTCATGAACCTAGGTGTCAATTTGTTACATCCCCTGATCCTCCACAGCCTTGTAAGTCT
GTGAATCAGACTTGCCCTTATTACTATTGGTATGGTGATAGCTCCAATACGACTGGCGAT
TTCGCTCTAGAAACGTTTACTGTTAACCTCACGACCCCGAGTGGGAGTGAGTTTAGGAAG
GTGGAAGATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGGTTGTTTCATGGTGCTGCT
GGTTTGTTAGGACTTGGGAGAGGGCCACTTTCCTTTGCCTCTCAGCTTCAATCTTTGTAT
GGTCATTCTTTTTCGTACTGCCTTGTGGATAGGAATAGCAATTCTAGTGTAAGCAGCAAA
TTGATTTTTGGTGAAGATAAGGATCTTTTGAAGCATCCACAATTGAACTTTACTTCATTG
GTTGGTGGCAAAGATAACCCTGCAGAGACTTTCTACTATGTGCAGATAAAATCTGTCATA
GTTGGAGGAGAGGTACTGAATATACCGAAGGAGACGTGGAATTTGTCTCCAGAAGGTGTT
GGTGGTACAATCATTGATTCAGGAACCACATTGAGTTACTTTGCTGAACCAGCCTATGAG
ATTGTAAAAGAGGCATTTGTCAAGAAGGTCAAGAGCTATCCCATTGTACAACACTTCCCT
ATTTTGAATCCATGTTACAATGTGTCCGGAGTGAAGAACGTTGAATTTCCCTCGTTTGGA
ATTGTGTTTGGTGATGGAGCTGTATGGAATTTTCCAGTAGAGAACTACTTCATCAAACTT
GAACCCGATATCATTTGTTTGGCAATTCTTGGGACTCCTCGGTCTGCTTTGTCGATAATT
GGAAACTATCAACAGCAGAATTTTCATATCTTATATGACACCAAGAGGTCCAGACTGGGA
TATGCACCAACAAGATGTGCTGATGTTTGA

Peptide Sequence

PEP ID

Solyc07g045100.1.1
PEP Infomation

LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G59080.1)
Sequence

MVTKFHFFNLLFLFLFSSGCAVASGGFYSFRNMNSSVSGIVLPEHPSFNGVSSSANSDCN
YGVSEKSTTHSIAQELDGSEDVSDVSNQQKEESVKFHLRHRSEKIEAEDSVFRDLSRIQT
LHTRIVEKKNQNTNSRLAKSSEKHEIASAHAPVAAASPPLESLSYELSGKLMATLESGVS
LGSGEYFMDVFVGTPPKHFSLILDTGSDLNWLQCVPCYDCFEQNGPHYDPKDSTSFRNIS
CHEPRCQFVTSPDPPQPCKSVNQTCPYYYWYGDSSNTTGDFALETFTVNLTTPSGSEFRK
VEDVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLQSLYGHSFSYCLVDRNSNSSVSSK
LIFGEDKDLLKHPQLNFTSLVGGKDNPAETFYYVQIKSVIVGGEVLNIPKETWNLSPEGV
GGTIIDSGTTLSYFAEPAYEIVKEAFVKKVKSYPIVQHFPILNPCYNVSGVKNVEFPSFG
IVFGDGAVWNFPVENYFIKLEPDIICLAILGTPRSALSIIGNYQQQNFHILYDTKRSRLG
YAPTRCADV*

Transcript Sequence

Transcript ID

Solyc07g045100.1.1
Transcript Infomation

LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G59080.1)
Sequence

ATGGTGACAAAGTTTCATTTTTTCAATTTGTTGTTCCTGTTCTTGTTTTCATCTGGTTGT
GCGGTGGCATCTGGAGGATTTTACAGTTTTAGAAATATGAATTCGAGTGTTTCTGGGATT
GTATTACCTGAGCATCCAAGCTTCAATGGTGTTTCTTCTTCTGCAAACTCAGATTGCAAC
TATGGGGTTTCTGAGAAATCAACAACTCATTCAATAGCTCAAGAACTAGATGGGTCTGAA
GATGTCTCAGATGTTTCTAACCAGCAAAAAGAGGAATCTGTCAAGTTTCATTTAAGGCAC
AGATCAGAAAAAATTGAGGCTGAAGACTCAGTTTTTAGGGATTTGAGTAGGATTCAGACA
TTGCATACAAGGATTGTTGAGAAGAAAAATCAGAATACTAATTCAAGACTTGCTAAAAGT
AGTGAAAAACATGAGATTGCTTCTGCTCATGCTCCGGTAGCCGCCGCCTCGCCGCCACTG
GAATCTCTGTCTTATGAGCTATCTGGGAAGCTCATGGCAACTTTGGAGTCAGGGGTGAGT
CTTGGTTCAGGAGAGTATTTCATGGATGTATTTGTGGGTACACCTCCTAAGCATTTTTCT
TTGATTCTTGATACTGGTAGTGATCTTAATTGGCTTCAATGTGTTCCTTGTTATGATTGT
TTTGAACAAAATGGCCCCCATTATGATCCTAAAGACTCTACTTCTTTTAGAAATATAAGT
TGTCATGAACCTAGGTGTCAATTTGTTACATCCCCTGATCCTCCACAGCCTTGTAAGTCT
GTGAATCAGACTTGCCCTTATTACTATTGGTATGGTGATAGCTCCAATACGACTGGCGAT
TTCGCTCTAGAAACGTTTACTGTTAACCTCACGACCCCGAGTGGGAGTGAGTTTAGGAAG
GTGGAAGATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGGTTGTTTCATGGTGCTGCT
GGTTTGTTAGGACTTGGGAGAGGGCCACTTTCCTTTGCCTCTCAGCTTCAATCTTTGTAT
GGTCATTCTTTTTCGTACTGCCTTGTGGATAGGAATAGCAATTCTAGTGTAAGCAGCAAA
TTGATTTTTGGTGAAGATAAGGATCTTTTGAAGCATCCACAATTGAACTTTACTTCATTG
GTTGGTGGCAAAGATAACCCTGCAGAGACTTTCTACTATGTGCAGATAAAATCTGTCATA
GTTGGAGGAGAGGTACTGAATATACCGAAGGAGACGTGGAATTTGTCTCCAGAAGGTGTT
GGTGGTACAATCATTGATTCAGGAACCACATTGAGTTACTTTGCTGAACCAGCCTATGAG
ATTGTAAAAGAGGCATTTGTCAAGAAGGTCAAGAGCTATCCCATTGTACAACACTTCCCT
ATTTTGAATCCATGTTACAATGTGTCCGGAGTGAAGAACGTTGAATTTCCCTCGTTTGGA
ATTGTGTTTGGTGATGGAGCTGTATGGAATTTTCCAGTAGAGAACTACTTCATCAAACTT
GAACCCGATATCATTTGTTTGGCAATTCTTGGGACTCCTCGGTCTGCTTTGTCGATAATT
GGAAACTATCAACAGCAGAATTTTCATATCTTATATGACACCAAGAGGTCCAGACTGGGA
TATGCACCAACAAGATGTGCTGATGTTTGA