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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g045040.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G20400.1)
Sequence

ATGTCTATCGTTGGACGATCAAAACATGTTCAAGAGATTTCTGCGAAAGGAATAGAACCT
CCATCGGAGTTTTTCGTTAAGGATACTATTCTTGCTGGAAATTTAGGCTCTATTTCATTG
ATCCAAATACCGATCATCGATCTGAATTTGCTTTTATTGGATCCCAATTCTGAAGCATAC
AAGGATGAAATCAACAAACTGCTAGATGCTCTCAGCTCTTGGGGTGTTTTTCAGGTAATA
GGTCATGGGATGTCAAGTTCATATTTGGAGGAAATACGTAACGTCATCAAGAAATTCTTT
TGTCTATCAAATGAAGAGAAGCAAAAATATAGTAGAGCTGCTGATGGATTTGAAGGATAT
GGAAATGACCCAATTTTTGTTGAAGGACAAGTTTTAGATTGGTGTGATCGATTGTTTTTG
ACAGCATACCCTCAAGATCAAAGAAATCTTCAATTTTGGCCTCAAAATCCTCCTAATTTT
ATGAATGTCTTTGAAGAATATTGTAATAAGGTGATAGTATTAACAAGAACTTTGCTAAAA
ATATTTGCAAGATCACAAAACTTGGAGGATGATGCTTTCTATAAAGAGATTGGAGAAAAA
ACATTGGTACAAGCTAGATTTAACTTGTACCCTAAATGTCCAAAACCAGATAAAATTTTG
GGAGTCAAAGCTCATGCAGATGCATCAATAATCACTACTCTTTTGCAAGACAAAGAAGTT
GAGGGCCTTCAAGTTTTAAAAGATGGCAAATGGTATGGAGTTCCTACAATACCCCATGCT
TTACTAATCAACATTGGCGATCAACTCGAGATAATGAGTAATGGAATTTTCAAGAGCCCA
ATTCATAGGGTGGCAGCAAACTCAGAACAAGAAAGGATAAGTTTAGCAGTGTTCTATTTC
CCAGATTATGAAAAAGAGATAGAGCCCCTCCAAGGTTTAATAAATTCACAAAGGCCCCAA
ATGTTTAGAAAAGTTAAAAACTATCCTTCTATTAGTTTCAAGTCCTTCCATAGTGGTCAA
ATAGCCATTGACACTCTTAGAATTTCACCTTCTCAATGA

Peptide Sequence

PEP ID

Solyc07g045040.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G20400.1)
Sequence

MSIVGRSKHVQEISAKGIEPPSEFFVKDTILAGNLGSISLIQIPIIDLNLLLLDPNSEAY
KDEINKLLDALSSWGVFQVIGHGMSSSYLEEIRNVIKKFFCLSNEEKQKYSRAADGFEGY
GNDPIFVEGQVLDWCDRLFLTAYPQDQRNLQFWPQNPPNFMNVFEEYCNKVIVLTRTLLK
IFARSQNLEDDAFYKEIGEKTLVQARFNLYPKCPKPDKILGVKAHADASIITTLLQDKEV
EGLQVLKDGKWYGVPTIPHALLINIGDQLEIMSNGIFKSPIHRVAANSEQERISLAVFYF
PDYEKEIEPLQGLINSQRPQMFRKVKNYPSISFKSFHSGQIAIDTLRISPSQ*

Transcript Sequence

Transcript ID

Solyc07g045040.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G20400.1)
Sequence

ATGTCTATCGTTGGACGATCAAAACATGTTCAAGAGATTTCTGCGAAAGGAATAGAACCT
CCATCGGAGTTTTTCGTTAAGGATACTATTCTTGCTGGAAATTTAGGCTCTATTTCATTG
ATCCAAATACCGATCATCGATCTGAATTTGCTTTTATTGGATCCCAATTCTGAAGCATAC
AAGGATGAAATCAACAAACTGCTAGATGCTCTCAGCTCTTGGGGTGTTTTTCAGGTAATA
GGTCATGGGATGTCAAGTTCATATTTGGAGGAAATACGTAACGTCATCAAGAAATTCTTT
TGTCTATCAAATGAAGAGAAGCAAAAATATAGTAGAGCTGCTGATGGATTTGAAGGATAT
GGAAATGACCCAATTTTTGTTGAAGGACAAGTTTTAGATTGGTGTGATCGATTGTTTTTG
ACAGCATACCCTCAAGATCAAAGAAATCTTCAATTTTGGCCTCAAAATCCTCCTAATTTT
ATGAATGTCTTTGAAGAATATTGTAATAAGGTGATAGTATTAACAAGAACTTTGCTAAAA
ATATTTGCAAGATCACAAAACTTGGAGGATGATGCTTTCTATAAAGAGATTGGAGAAAAA
ACATTGGTACAAGCTAGATTTAACTTGTACCCTAAATGTCCAAAACCAGATAAAATTTTG
GGAGTCAAAGCTCATGCAGATGCATCAATAATCACTACTCTTTTGCAAGACAAAGAAGTT
GAGGGCCTTCAAGTTTTAAAAGATGGCAAATGGTATGGAGTTCCTACAATACCCCATGCT
TTACTAATCAACATTGGCGATCAACTCGAGATAATGAGTAATGGAATTTTCAAGAGCCCA
ATTCATAGGGTGGCAGCAAACTCAGAACAAGAAAGGATAAGTTTAGCAGTGTTCTATTTC
CCAGATTATGAAAAAGAGATAGAGCCCCTCCAAGGTTTAATAAATTCACAAAGGCCCCAA
ATGTTTAGAAAAGTTAAAAACTATCCTTCTATTAGTTTCAAGTCCTTCCATAGTGGTCAA
ATAGCCATTGACACTCTTAGAATTTCACCTTCTCAATGAAAATTTTCAACAAATTTCCCC
TAATTATATGTAGATTGCAACTTCATAATTGGATTGAAAATAAATATGTAATTTTTTA