Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g044980.3.1
CDS Infomation

NIM1-like protein 2
Sequence

ATGGAGAGCGGCCATGAGAGTTTTGCTACATCTTCTAATGTATCAAATGAGTGCAGTAGT
CCCCAGGAACCAGGACCAAATGTTGATCATTTGAGTAATTTATGTGGTAGTCTTGAGAAA
CTCCTGCTTAATCCTGAATATGACTATAGTGATGCAGAAATTGTCGTTGAGGGGATTAAT
GTTGGCGTTAATCGCTGTATATTGGCTGCACGAAGTCAGTTTTTCCATGAAAAGTTTAAG
GAGAAGAATGAGAATTCCTTGAAAAATGAAAAGCCTAAATATTTGCTGAAGGATTTGGTG
TGTGTTTCCTCAATTGGCTATGAAGTATTCATGGTCCTCCTGAATTATTTATATACAGGA
AAGATTAAGTCGTCTCCTTCAGAAGTTTCGAGTTGTGTTGATAATGCTTGTGCTCATGAT
GCTTGCCGCCCTGCCATTAATTATGCAGTGGAACTCATGTATGCTTCGTCCACTTTTCAG
ATAAAAGAACTCGTTATGTTCGTAGAGCGCTATCTCGACAACTTTGTTGATAAGGCTACT
CCTGAGGATGTAATTCCTATACTTTTAGTTGCCTTTCACCGCAAGTCTAATCAACTTCTT
GAACACTGCATCCAGAGAGTGGCACGATCTGATCTAGACAATGCTACTCTTGAGAAAGAA
CTCCCTCATGAAGTTTTGACTGACATAAAATCAAGGCGCCTCAAGTCTCGACAAGGGACT
GAACAGGAGTCATTAGACTCCTTGAGTGAAAAGAGAATTAGGAGGATTCTGAAGGCTCTG
GAGTCTGATGACATTGAATTGCTAACACTACTCCTGGAAGAGTCAAACGTCACTTTAAAT
GATGCTTGTGCTCTTCATTATGCAGCTGCCTATTGCAACTCCAAGGTTGTGAACGAGGTA
CTTGAGCTGGGTTTAGGCGCTGATGTCAATCTTCAGAACTCCCGAGGATATAATGTCCTA
CATGTTGCAGCTAGACGAAAGGAGCCATCAATAATAATGGGACTACTTGCAAAAGGAGCA
TCCGTCTTGGATACTACACGTGATGGACATACAGCCCTATCCATATGCCGTAGATTGACT
CGGTTAAAGGATTACAATGATCCACCGAAGCAAGGAAAGGTTACTAATAAAGACCGGTTA
TGCATTGATGTTTTGGAGAGAGAGATGATTAGGAATCCTATGATTGGGAGCATGTGTTCT
TCATCATTGGTGTTGGCTGATGAATTACTCATGAGGTTGCTTTTATTTGAAAATAGAGTG
GCATTGGCACGGATGTTATTTCCTCAGGAAGCCATGCTAGCTATGGAAATAGCACATGCT
GATTCAACCGCAGAGTTTACTGGCCTTTCAGCAACAAATGGCTTATGCAAAAATCCGGGA
GGGGTTGACTTGAACAAATTACCGTCTGAGCAAGTGAAAAGACTCCAAGATCGGCTGGGC
GCACTACTGAAAACAGTGGACACAGGTCGACGTTTTTTCCCAAACTGCTCGGAAGTATTA
GATAGATTACTGGAGGATGACAAACTAGATTCCTTGATGTTAGAAAGTGGCACCCCTGAG
GAACAAAGATCAAAGAAAATGCGATACACAGAGCTCAAGGATGAAGTTATGGAGGCATTC
AAGAAAGACAAAGCTGAAAAGAACTGGGCGGGCTTCTCTACGTCTTCCTCCTCTTCATGT
TCTCCAAAGACCAATGTCAGTCACAAGAATAGAAAAAAGTAG

Peptide Sequence

PEP ID

Solyc07g044980.3.1
PEP Infomation

NIM1-like protein 2
Sequence

MESGHESFATSSNVSNECSSPQEPGPNVDHLSNLCGSLEKLLLNPEYDYSDAEIVVEGIN
VGVNRCILAARSQFFHEKFKEKNENSLKNEKPKYLLKDLVCVSSIGYEVFMVLLNYLYTG
KIKSSPSEVSSCVDNACAHDACRPAINYAVELMYASSTFQIKELVMFVERYLDNFVDKAT
PEDVIPILLVAFHRKSNQLLEHCIQRVARSDLDNATLEKELPHEVLTDIKSRRLKSRQGT
EQESLDSLSEKRIRRILKALESDDIELLTLLLEESNVTLNDACALHYAAAYCNSKVVNEV
LELGLGADVNLQNSRGYNVLHVAARRKEPSIIMGLLAKGASVLDTTRDGHTALSICRRLT
RLKDYNDPPKQGKVTNKDRLCIDVLEREMIRNPMIGSMCSSSLVLADELLMRLLLFENRV
ALARMLFPQEAMLAMEIAHADSTAEFTGLSATNGLCKNPGGVDLNKLPSEQVKRLQDRLG
ALLKTVDTGRRFFPNCSEVLDRLLEDDKLDSLMLESGTPEEQRSKKMRYTELKDEVMEAF
KKDKAEKNWAGFSTSSSSSCSPKTNVSHKNRKK*

Transcript Sequence

Transcript ID

Solyc07g044980.3.1
Transcript Infomation

NIM1-like protein 2
Sequence

CCTCTAATCCCACCCCTAAAAACACGGCTTGGGCCCGCCAATTCCCATTCGTCGTACTAT
CCCAATTCACACCCAATGGCCACAAAGATAAAAGCCAAAATAGACCTCATATCTTATAAA
TTAAGAAAAGAAAAAAAAACCATGTTAATTTAACAAAATTAAGGTGTAATATATGAAAGT
AAGGATATACAATAAACATATATTATTGTAACTTGATACATGCACCTGCACCATTCACTA
GTAGTATTCCTCTTTCTGTATCTCTCTTATATTCTCTCTTTTTTTTTTTCATTTCACTCT
TTTATTTCCAACTCAAAGTCATTACTTACTTCATTCTGTCACAACAAGCAATCACTTTTT
ACACTAGTTTTTGGGTCATCAGTCAGCAGAGTGCAACTTTCTTCCACAATACATATTTGG
GGTATGCAGAATCACCTTTTTTATTTTTTGGGAGTTTTCATGTTTATGTTAGAATGATGG
GATTTCACCAGCAGCAGCCAGGCTTGCAGGTGTGAGAGTTTGGGCCAAGATCATGCAGAG
TTGACCTGTTGACTTTAGTTTTCAACTTTTTCAGATTCCTGAAAGTTTTGTGCTTTCTCT
TGAGGGATGAATTCTTGCTAGTTTATTTACCAAGGCAGTAATTAAGTTTGAACAATGGAG
AGCGGCCATGAGAGTTTTGCTACATCTTCTAATGTATCAAATGAGTGCAGTAGTCCCCAG
GAACCAGGACCAAATGTTGATCATTTGAGTAATTTATGTGGTAGTCTTGAGAAACTCCTG
CTTAATCCTGAATATGACTATAGTGATGCAGAAATTGTCGTTGAGGGGATTAATGTTGGC
GTTAATCGCTGTATATTGGCTGCACGAAGTCAGTTTTTCCATGAAAAGTTTAAGGAGAAG
AATGAGAATTCCTTGAAAAATGAAAAGCCTAAATATTTGCTGAAGGATTTGGTGTGTGTT
TCCTCAATTGGCTATGAAGTATTCATGGTCCTCCTGAATTATTTATATACAGGAAAGATT
AAGTCGTCTCCTTCAGAAGTTTCGAGTTGTGTTGATAATGCTTGTGCTCATGATGCTTGC
CGCCCTGCCATTAATTATGCAGTGGAACTCATGTATGCTTCGTCCACTTTTCAGATAAAA
GAACTCGTTATGTTCGTAGAGCGCTATCTCGACAACTTTGTTGATAAGGCTACTCCTGAG
GATGTAATTCCTATACTTTTAGTTGCCTTTCACCGCAAGTCTAATCAACTTCTTGAACAC
TGCATCCAGAGAGTGGCACGATCTGATCTAGACAATGCTACTCTTGAGAAAGAACTCCCT
CATGAAGTTTTGACTGACATAAAATCAAGGCGCCTCAAGTCTCGACAAGGGACTGAACAG
GAGTCATTAGACTCCTTGAGTGAAAAGAGAATTAGGAGGATTCTGAAGGCTCTGGAGTCT
GATGACATTGAATTGCTAACACTACTCCTGGAAGAGTCAAACGTCACTTTAAATGATGCT
TGTGCTCTTCATTATGCAGCTGCCTATTGCAACTCCAAGGTTGTGAACGAGGTACTTGAG
CTGGGTTTAGGCGCTGATGTCAATCTTCAGAACTCCCGAGGATATAATGTCCTACATGTT
GCAGCTAGACGAAAGGAGCCATCAATAATAATGGGACTACTTGCAAAAGGAGCATCCGTC
TTGGATACTACACGTGATGGACATACAGCCCTATCCATATGCCGTAGATTGACTCGGTTA
AAGGATTACAATGATCCACCGAAGCAAGGAAAGGTTACTAATAAAGACCGGTTATGCATT
GATGTTTTGGAGAGAGAGATGATTAGGAATCCTATGATTGGGAGCATGTGTTCTTCATCA
TTGGTGTTGGCTGATGAATTACTCATGAGGTTGCTTTTATTTGAAAATAGAGTGGCATTG
GCACGGATGTTATTTCCTCAGGAAGCCATGCTAGCTATGGAAATAGCACATGCTGATTCA
ACCGCAGAGTTTACTGGCCTTTCAGCAACAAATGGCTTATGCAAAAATCCGGGAGGGGTT
GACTTGAACAAATTACCGTCTGAGCAAGTGAAAAGACTCCAAGATCGGCTGGGCGCACTA
CTGAAAACAGTGGACACAGGTCGACGTTTTTTCCCAAACTGCTCGGAAGTATTAGATAGA
TTACTGGAGGATGACAAACTAGATTCCTTGATGTTAGAAAGTGGCACCCCTGAGGAACAA
AGATCAAAGAAAATGCGATACACAGAGCTCAAGGATGAAGTTATGGAGGCATTCAAGAAA
GACAAAGCTGAAAAGAACTGGGCGGGCTTCTCTACGTCTTCCTCCTCTTCATGTTCTCCA
AAGACCAATGTCAGTCACAAGAATAGAAAAAAGTAGATCCTCTCCTCAGCTAAGAATTCT
AACGATGGCTGAAGCCTCTATCTTGAAGGGCCGCGTCACTTTTGAACCTTGTCATGAGCT
TTACATGTTTGAGCTCCATATATATTATAGTACTCAACTTTCTTTTGGACAAGTATATCA
TTGAGAGTGGAATGGTTATGGGGTTACTATAATAGGAGAAAGAGGAATAAAAGTAGCTAT
AGAAATGGTTCTTCTTGTGTAATATTAGTACTTCTTTTGAATTGATGATTGTTAAATTTA
TGGTGATATATGCAGAAAACATGTAGTCTCCACAAACTTTCTTCTTTCTGGATTTTCATG
CGTACAATATCTCTATCCAATAATTTCATAATACATATACAATATCTAAACAAAATAACC
GAAGAAACTAACAACTCTCAATAA