Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g044930.3.1
CDS Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S326_RICCO)
Sequence	ATGGCGTCAACAGCTCCATCATCATCATCATCTGGGGTTGGGAAGAAGAGGCAGAAGAAA GGCCAAAAACAACAAGAAGTTACCAATGTTGCAGAATCCACTCGGATTCGGGTTGCCCAA GTTCTTGAACAGTTTCGTGTCTCTAATGATGAAGTATACACATTTGAATCAAACCTTTCA AACCGCGATAGAGCTGCAGTTCATATGTTATGCCGGAAAATGGGAATGAAGTCAAAAAGT TCTGGGCGTGGGGATCAACGTCGTATATCAATTTTCAAGACTAAACAGAACACGGACACA ATGAAAGGAAAGGATGTGCTAAGTTGTTTTAAATTTTCGGAGGAGGCAAAATATGCTCTA CAGGATTTATTTACGCGATATCCACCTGGTGATGGGGAGACAAATGAACCAGTAGTCGGG AAACACAGTAAGAAATTTGATAAATTGCGAGGAAAGAAGGATGATATGTTCTGTAAACCT GTGATAAGCACGTCTGAAATTGCAAAAAGGGTCGAGTCATTTGCGTCAAGAATAGAAAAA AGCCCAAACATGAGACAGATTACATTACAAAGGTCTAAGCTACCAATTGCTTCCTTCAAG GATGCTATTACGTCAACTATAGAATCTAATCAGGTGGTCTTGATCTCTGGTGAAACTGGA TGCGGGAAAACTACACAGGTCCCTCAGTTTATTTTAGATCATATGTGGGGTAAAGGTGAG ACATGTAAAATTGTATGTACTCAGCCACGACGAATTTCTGCCATATCAGTTTCTGAGAGA ATTTCTGCTGAAAGAGGCGAAAGTGTTGGAGATACTGTTGGTTACAAGATACGGATGGAA AGCAGAGGTGGAAAGCAGTCATCAATCATGTTTTGTACCAATGGGATTCTACTTAGGGTC CTGATTACCAATGGAAGTGCCAGCTTCAACAAGGAGGCTCCGGGGAAAATGGGCAAGGAT CCCATTTCTGATTTAACCCACATCATTGTGGATGAAATTCATGAGAGGGATCGCTACTCC GATTTCATGCTCGCTATTCTCAGGGACTTGCTTCCTTCATATCCAAATTTGCGTTTGGTT CTGATGAGTGCTACACTGGATGCTGAACGTTTTTCAAAATACTTTGGTGGCTGCCCAGTT ATCCGAGTCCCTGGATTTACTTATCCTGTAAAAACATTCTATCTTGAGGATGTACTTTCT ATTGTAAAGTCAACTAAAAATAATCACCTTGACTCCACCTCATCCACTGTCATGCCTGAG GAATCAATATTAACAGAGGAGTACAAAGTTGCCTTAGATGAAGCAATTAATCTGGCTTTT TCAGATGATGATCTGGATCCCCTTTTGGATCTAATATCTTCTGAAGGGGGACCAAAGATT TTCAATTATCAGCATTCTTTGAGTGGAGTGACGCCATTGATGGTGTTAGCTGGAAAAGGC CGCGTTGGTGACATTTGCATGCTCCTTTCTTTTGGTGCTGACTGCCATTTACGTGCTAAT GATGGGAAAACTGCTCTAGATTGGGCTGAGCAGGAGAATCAGACACAAGTTGTTGAAATA ATTAAGGAACACATGGAGAAATCATCTTCCAGTTGTGAGGAGCAGCAACATTTACTTGAC AAATACCTATCAACAGTTGACCCTGAACTGATTGATGATGTCCTTATTGAGCAACTATTA AAAAAAATATGCATAGACTCGGAGGACGGGGCCATCCTTGTTTTCCTTCCTGGTTGGGAG GACATTAACAGAACACGAGAGAGATTGAGAGCAAGCCACTATTTCAATGATCAGTCTAAG TTTTCAGTGATCCCTCTCCATTCTATGGTTCCTTCTGTGGAGCAAAAGAAGGTTTTTAGA CACCCTCCTCCAGGCTGCCGCAAAATCGTTCTTTCAACTAATATTGCTGAAACTGCCATT ACCATTGATGATGTTGTTTATGTAATCGACAGTGGACGAATGAAAGAAAAAAGTTATGAC CCTTATAATAATGTATCAACTCTTCAATCTTCATGGGTCTCAAAAGCAAGTGCAAAGCAA AGAGAAGGGCGTGCTGGGCGGTGCCAGCCAGGGATTTGTTATCATCTTTATTCAAAACTT CGAGCAGCTTCATTGCCTGATTTCCAGGTTCCTGAGATTAAGAGGATTCCTATAGAGGAA CTATGTCTTCAGGTCAAGCTTCTTAACCCTGATTGCAAGATAGAAGAATTCCTGCAGAAG ACACTTGACCCTCCGGTTTATGAGACCATACGTAATGCAATCATTGTTCTTCAAGATATT GGGGCGTTGTCATTTGATGAGAAACTTACAGAGCTTGGAGAAAGGCTAGGATCTTTACCA GTTCATCCGCTTACAAGCAAGATGCTTTTAATTTCCATCTTATTGAACTGCCTTGACCCA GCATTGACTATGGCTTGTGCTTCTGACTATAGAGATCCATTTACCCTACCCATGTTGCCA AATGAGAAGAAGAAAGCTGCAGCTGCAAAAGCTGAGTTAGCCTCATGGTATGGTGGAAGA AGTGATCAATTAGCAGTTGTGGCTGCATTTGAGGGCTGGAAAAGTGCGAAAGAAACTGGT CAAGAATCGAGGTTTTGTTCTAAGTACTTTTTATCTTCAGGCACTATGCATATGCTATCA GGAATGCGTAAACAACTTGCATCTGAACTGTTGAGGAATGGGTTTATTCCCGGAGATGGA TCTTCCTGTAACCTTAACGCACAGGATCCAGGCATACTACATGCTGTTCTTGTTGCTGGT TTGTACCCTATGGTTGGAAGACTGCTCCCGCCTTTGAAAAATAACAAGAAATCTGTCATT GAGACTGCAGGTGGTGATAAAGTTCGATTAAGCCCTCATTCTACTAACTTCAAGCTTTCA TTCCAAAAATTCTATGATCAACCACTAATTGCATATGATGAGATAACTCGTGGTGATGGA GGTCTGCTTATAAGGAATTGTAGTGTCATTGGGCCACTCCCACTGTTATTGCTGGCAACA GAGATTGTAGTGGCTCCTGGAAATGAAGATGATGATGATGACAATGATGATGACGAAAGT GATTACGAAGATGCTGATGAGGACAATGGTGAGGAAGGTAATATTAAAGCAGATCTGTCA GAAGCCCATCAAGGAGAGAAAATTATGTCTTCACCTGATAATACAGTTAAGGTCATTGTT GATAGATGGATCCCTTTTGAGTCAACAGCTCTTGATGTTGCTCAAATTTACTGCTTGAGA GAGAGGTTAGCTGCAGCAATTTTATTTAAGGTCACACATCCTGGAAAAGTTCTTCCTGAG GTTCTTGCAGCCTCTATAAATGCAATGGGTTGCATCTTGTCGTACAATGGGATGTCAGGA ATATCATTGCCGCATGAGCCTGTGGACTCACTTACTACAATGGTTGGTGCTACTGAGATT GGTCAGTCTGATCCTGGGTGGAATAACAGAATGGATATGAATCCTAACATCCGGCATCAA CACCCCAATATGCATCAGCAAAGAGGAGGTGGCATTCATGTATCAAAGGGATCGTCTGCG CATAGAGGAACCATGCAAAGAGGTCATTCTAAGCGGAAACGTGGAAATGGACCTTATTGA

Peptide Sequence

PEP ID	Solyc07g044930.3.1
PEP Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S326_RICCO)
Sequence	MASTAPSSSSSGVGKKRQKKGQKQQEVTNVAESTRIRVAQVLEQFRVSNDEVYTFESNLS NRDRAAVHMLCRKMGMKSKSSGRGDQRRISIFKTKQNTDTMKGKDVLSCFKFSEEAKYAL QDLFTRYPPGDGETNEPVVGKHSKKFDKLRGKKDDMFCKPVISTSEIAKRVESFASRIEK SPNMRQITLQRSKLPIASFKDAITSTIESNQVVLISGETGCGKTTQVPQFILDHMWGKGE TCKIVCTQPRRISAISVSERISAERGESVGDTVGYKIRMESRGGKQSSIMFCTNGILLRV LITNGSASFNKEAPGKMGKDPISDLTHIIVDEIHERDRYSDFMLAILRDLLPSYPNLRLV LMSATLDAERFSKYFGGCPVIRVPGFTYPVKTFYLEDVLSIVKSTKNNHLDSTSSTVMPE ESILTEEYKVALDEAINLAFSDDDLDPLLDLISSEGGPKIFNYQHSLSGVTPLMVLAGKG RVGDICMLLSFGADCHLRANDGKTALDWAEQENQTQVVEIIKEHMEKSSSSCEEQQHLLD KYLSTVDPELIDDVLIEQLLKKICIDSEDGAILVFLPGWEDINRTRERLRASHYFNDQSK FSVIPLHSMVPSVEQKKVFRHPPPGCRKIVLSTNIAETAITIDDVVYVIDSGRMKEKSYD PYNNVSTLQSSWVSKASAKQREGRAGRCQPGICYHLYSKLRAASLPDFQVPEIKRIPIEE LCLQVKLLNPDCKIEEFLQKTLDPPVYETIRNAIIVLQDIGALSFDEKLTELGERLGSLP VHPLTSKMLLISILLNCLDPALTMACASDYRDPFTLPMLPNEKKKAAAAKAELASWYGGR SDQLAVVAAFEGWKSAKETGQESRFCSKYFLSSGTMHMLSGMRKQLASELLRNGFIPGDG SSCNLNAQDPGILHAVLVAGLYPMVGRLLPPLKNNKKSVIETAGGDKVRLSPHSTNFKLS FQKFYDQPLIAYDEITRGDGGLLIRNCSVIGPLPLLLLATEIVVAPGNEDDDDDNDDDES DYEDADEDNGEEGNIKADLSEAHQGEKIMSSPDNTVKVIVDRWIPFESTALDVAQIYCLR ERLAAAILFKVTHPGKVLPEVLAASINAMGCILSYNGMSGISLPHEPVDSLTTMVGATEI GQSDPGWNNRMDMNPNIRHQHPNMHQQRGGGIHVSKGSSAHRGTMQRGHSKRKRGNGPY*

Transcript Sequence

Transcript ID	Solyc07g044930.3.1
Transcript Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S326_RICCO)
Sequence	CACTTGTCCTAGTTATACTTATTAACTTTAGGGGGGATTTTCATCTTTTGTATAAAAATT GTTTAGCGAGAGGTGAAGAAGGGCAGAGAGGAGCTTATGAGCAGCGGCGCGAAGAGGAAG AGAAATCAAGAATACAAAGAAAGGGACATTACAGAATATCCCCTTTTTGATTTTAGTACA GAAAAGAAGTAATCAAGATTGAGTGAAATGGCGTCAACAGCTCCATCATCATCATCATCT GGGGTTGGGAAGAAGAGGCAGAAGAAAGGCCAAAAACAACAAGAAGTTACCAATGTTGCA GAATCCACTCGGATTCGGGTTGCCCAAGTTCTTGAACAGTTTCGTGTCTCTAATGATGAA GTATACACATTTGAATCAAACCTTTCAAACCGCGATAGAGCTGCAGTTCATATGTTATGC CGGAAAATGGGAATGAAGTCAAAAAGTTCTGGGCGTGGGGATCAACGTCGTATATCAATT TTCAAGACTAAACAGAACACGGACACAATGAAAGGAAAGGATGTGCTAAGTTGTTTTAAA TTTTCGGAGGAGGCAAAATATGCTCTACAGGATTTATTTACGCGATATCCACCTGGTGAT GGGGAGACAAATGAACCAGTAGTCGGGAAACACAGTAAGAAATTTGATAAATTGCGAGGA AAGAAGGATGATATGTTCTGTAAACCTGTGATAAGCACGTCTGAAATTGCAAAAAGGGTC GAGTCATTTGCGTCAAGAATAGAAAAAAGCCCAAACATGAGACAGATTACATTACAAAGG TCTAAGCTACCAATTGCTTCCTTCAAGGATGCTATTACGTCAACTATAGAATCTAATCAG GTGGTCTTGATCTCTGGTGAAACTGGATGCGGGAAAACTACACAGGTCCCTCAGTTTATT TTAGATCATATGTGGGGTAAAGGTGAGACATGTAAAATTGTATGTACTCAGCCACGACGA ATTTCTGCCATATCAGTTTCTGAGAGAATTTCTGCTGAAAGAGGCGAAAGTGTTGGAGAT ACTGTTGGTTACAAGATACGGATGGAAAGCAGAGGTGGAAAGCAGTCATCAATCATGTTT TGTACCAATGGGATTCTACTTAGGGTCCTGATTACCAATGGAAGTGCCAGCTTCAACAAG GAGGCTCCGGGGAAAATGGGCAAGGATCCCATTTCTGATTTAACCCACATCATTGTGGAT GAAATTCATGAGAGGGATCGCTACTCCGATTTCATGCTCGCTATTCTCAGGGACTTGCTT CCTTCATATCCAAATTTGCGTTTGGTTCTGATGAGTGCTACACTGGATGCTGAACGTTTT TCAAAATACTTTGGTGGCTGCCCAGTTATCCGAGTCCCTGGATTTACTTATCCTGTAAAA ACATTCTATCTTGAGGATGTACTTTCTATTGTAAAGTCAACTAAAAATAATCACCTTGAC TCCACCTCATCCACTGTCATGCCTGAGGAATCAATATTAACAGAGGAGTACAAAGTTGCC TTAGATGAAGCAATTAATCTGGCTTTTTCAGATGATGATCTGGATCCCCTTTTGGATCTA ATATCTTCTGAAGGGGGACCAAAGATTTTCAATTATCAGCATTCTTTGAGTGGAGTGACG CCATTGATGGTGTTAGCTGGAAAAGGCCGCGTTGGTGACATTTGCATGCTCCTTTCTTTT GGTGCTGACTGCCATTTACGTGCTAATGATGGGAAAACTGCTCTAGATTGGGCTGAGCAG GAGAATCAGACACAAGTTGTTGAAATAATTAAGGAACACATGGAGAAATCATCTTCCAGT TGTGAGGAGCAGCAACATTTACTTGACAAATACCTATCAACAGTTGACCCTGAACTGATT GATGATGTCCTTATTGAGCAACTATTAAAAAAAATATGCATAGACTCGGAGGACGGGGCC ATCCTTGTTTTCCTTCCTGGTTGGGAGGACATTAACAGAACACGAGAGAGATTGAGAGCA AGCCACTATTTCAATGATCAGTCTAAGTTTTCAGTGATCCCTCTCCATTCTATGGTTCCT TCTGTGGAGCAAAAGAAGGTTTTTAGACACCCTCCTCCAGGCTGCCGCAAAATCGTTCTT TCAACTAATATTGCTGAAACTGCCATTACCATTGATGATGTTGTTTATGTAATCGACAGT GGACGAATGAAAGAAAAAAGTTATGACCCTTATAATAATGTATCAACTCTTCAATCTTCA TGGGTCTCAAAAGCAAGTGCAAAGCAAAGAGAAGGGCGTGCTGGGCGGTGCCAGCCAGGG ATTTGTTATCATCTTTATTCAAAACTTCGAGCAGCTTCATTGCCTGATTTCCAGGTTCCT GAGATTAAGAGGATTCCTATAGAGGAACTATGTCTTCAGGTCAAGCTTCTTAACCCTGAT TGCAAGATAGAAGAATTCCTGCAGAAGACACTTGACCCTCCGGTTTATGAGACCATACGT AATGCAATCATTGTTCTTCAAGATATTGGGGCGTTGTCATTTGATGAGAAACTTACAGAG CTTGGAGAAAGGCTAGGATCTTTACCAGTTCATCCGCTTACAAGCAAGATGCTTTTAATT TCCATCTTATTGAACTGCCTTGACCCAGCATTGACTATGGCTTGTGCTTCTGACTATAGA GATCCATTTACCCTACCCATGTTGCCAAATGAGAAGAAGAAAGCTGCAGCTGCAAAAGCT GAGTTAGCCTCATGGTATGGTGGAAGAAGTGATCAATTAGCAGTTGTGGCTGCATTTGAG GGCTGGAAAAGTGCGAAAGAAACTGGTCAAGAATCGAGGTTTTGTTCTAAGTACTTTTTA TCTTCAGGCACTATGCATATGCTATCAGGAATGCGTAAACAACTTGCATCTGAACTGTTG AGGAATGGGTTTATTCCCGGAGATGGATCTTCCTGTAACCTTAACGCACAGGATCCAGGC ATACTACATGCTGTTCTTGTTGCTGGTTTGTACCCTATGGTTGGAAGACTGCTCCCGCCT TTGAAAAATAACAAGAAATCTGTCATTGAGACTGCAGGTGGTGATAAAGTTCGATTAAGC CCTCATTCTACTAACTTCAAGCTTTCATTCCAAAAATTCTATGATCAACCACTAATTGCA TATGATGAGATAACTCGTGGTGATGGAGGTCTGCTTATAAGGAATTGTAGTGTCATTGGG CCACTCCCACTGTTATTGCTGGCAACAGAGATTGTAGTGGCTCCTGGAAATGAAGATGAT GATGATGACAATGATGATGACGAAAGTGATTACGAAGATGCTGATGAGGACAATGGTGAG GAAGGTAATATTAAAGCAGATCTGTCAGAAGCCCATCAAGGAGAGAAAATTATGTCTTCA CCTGATAATACAGTTAAGGTCATTGTTGATAGATGGATCCCTTTTGAGTCAACAGCTCTT GATGTTGCTCAAATTTACTGCTTGAGAGAGAGGTTAGCTGCAGCAATTTTATTTAAGGTC ACACATCCTGGAAAAGTTCTTCCTGAGGTTCTTGCAGCCTCTATAAATGCAATGGGTTGC ATCTTGTCGTACAATGGGATGTCAGGAATATCATTGCCGCATGAGCCTGTGGACTCACTT ACTACAATGGTTGGTGCTACTGAGATTGGTCAGTCTGATCCTGGGTGGAATAACAGAATG GATATGAATCCTAACATCCGGCATCAACACCCCAATATGCATCAGCAAAGAGGAGGTGGC ATTCATGTATCAAAGGGATCGTCTGCGCATAGAGGAACCATGCAAAGAGGTCATTCTAAG CGGAAACGTGGAAATGGACCTTATTGAATCAGAGGCTTAAGACAGATTTTTCCACACAAT CAACAGAGGTTTTTTTTTTCTTTTCACAGAAGCAACAGCAAGAATCTTCCCATTTTTGTT ACACTCCAAGAAGGTAAAGTAAGTAAACATATAGGGTGTTGTATGTATGCTGTAGGGAAT CAAAATGGGATTTTGCTACATCAAAGGGAAGATAGATGAATGCTGTATTTTTTTTGTTGT ACGATACGAAATCTGAATGTCTCGAAGGCTCTCGACTATAGTCTGAGCATTTGACTGTTC ATAAATAGAACAAAGAAATGCATGTTTTGAAAGAAAAAGTTGTCAAAATATGCCCTTCTC ATC