Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g043660.3.1
CDS Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

ATGACTACATTGTTAACAAGCTCAAATGTTGCATTGAGGTCCTTTAATGACCTCAACCGA
TTAGTCCAATTACACCCTCGCACTCAAAGGGTCCAGCTGAGGTGCAAACTTGCTGGTGAC
ATCGAAACAGATGAGTCCCGAATATTACTGGAGGGTGTTGTTACAAGTTCCGCTAATTAT
GTCCCATTGACACCAATAAGTTTCTTGGAGAGAGCAGCAGATGTTTTTGGCGATAGAACT
TCGGTTGTGTTTGGGTCTAGTGTGAAGTATACATGGGAAGAGACACATTCTAGGTGTCTA
AAACTTGCTTCTGCTTTGGTTCAGCTGGGGATTTCAAGGGGAGATGTGGTTGCAGCTTTG
GCTCCGAATGTACCAGCAATGCAGGAGCTGCATTTTGCAGTACCAATGGCGGAAGCAGTT
CTCTGCACATTAAATACTCGTCTTGATTCATCAATGGTTGCTCATTTGCTGAAACATTCA
GAAGCCAAGATAATATTTGTTGATCAACAATTGCTCCAAGTTGCTCAACAAGCACTCACT
CTTCTTTCAAAACACAAAATTATTCTTGTGCTAATACCTGAATATGAGAATTCCTCTTTG
ACATATGACATTCACGAATACGAAAAACTTCTGTCAAGTGGGAGTAGCAATTTTACAATA
AGATGGCCAAAAAGTGAATTTGATCCTATCAGTATCAATTATACTTCCGGTACAACATCC
TCGCCCAAAGGGGTCGTGTACAATCACAGAGGCGCATATCTCAATTCAATTTCTACTTTC
CTATGTCATGGCATGGCTCCGATGCCAACGTACCTTTGGACACTTCCAATGTTTCACTGC
AATGGATGGTGCATGAATTGGGGAGTGGCTGCACTTGGTGGCACAAATGTTTGCCTTAGA
CATGTCTCAGCGAAAGATATATTTGAAAGTATTTCTGTCAACAAGGTCACACATATGAGT
GCAGCACCAATTGTCTTGAGTATGATGGCAAATGCTTCACCAAATGACAGGAAACCACTT
CCCCATAAGGTCGATATACGGGTAGGCGGTTCACCACCGCCTCCACAAATTATTTCCAAA
ATGGAACAACTCGGATTTGGAGTATCCCATGGATATGGACTAACAGAAACTTATAGTGCT
GCTACGAGTTGCTTGTGGAAGCCTGAGTGGGATTCTTTGCCCCTTGAGGAACGAGCTGCG
CTTAAATCAAGACAAGGGGTACAAGTTCTTTGTATGGAAAAAGTTGACGTTAGAGACCCG
GAGACCATGGAAAATGTGCCAGCTGATGGAAAGAGCATTGGTGAGATTGTGTGCAGAGGA
AATACTGTGATGAGTGGATATTTGAAAGATGTTAAAGCAACTGAAGAAGCTTTTAAAGGC
GGATGGTTTCATACTGGTGATGTTGCAGTGAAACATCCAGATGGATATATAGAAATTAAG
GATCGGCTGAAAGATATTATAATATCTGGAGGTGAAAACATAAGCACACTCGAAGTGGAA
GGAGTATTACATAGTCATCCTGCAGTTGTTGAGGCAGCAGTAGTCGCACGACCAGATGAT
CATTGGGGACAAACACCTTGTGCATTTGTAAAGCTGAAAGAAGGATCTGAAGAAATAACT
TCAGATGAAATAATTAAATATTGTAGAGATCATTTACCACATTACATGGCACCTCGAACA
GTCTTATTTGAAGATTTACCAAGAACTTCAACTGGCAAAGTACAAAAAATCATCTTGAGA
GAGAAAGCAAAAGCTTTGGGCAGTCTTTTCAGCACTGAAAGAAATGTGTAA

Peptide Sequence

PEP ID

Solyc07g043660.3.1
PEP Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

MTTLLTSSNVALRSFNDLNRLVQLHPRTQRVQLRCKLAGDIETDESRILLEGVVTSSANY
VPLTPISFLERAADVFGDRTSVVFGSSVKYTWEETHSRCLKLASALVQLGISRGDVVAAL
APNVPAMQELHFAVPMAEAVLCTLNTRLDSSMVAHLLKHSEAKIIFVDQQLLQVAQQALT
LLSKHKIILVLIPEYENSSLTYDIHEYEKLLSSGSSNFTIRWPKSEFDPISINYTSGTTS
SPKGVVYNHRGAYLNSISTFLCHGMAPMPTYLWTLPMFHCNGWCMNWGVAALGGTNVCLR
HVSAKDIFESISVNKVTHMSAAPIVLSMMANASPNDRKPLPHKVDIRVGGSPPPPQIISK
MEQLGFGVSHGYGLTETYSAATSCLWKPEWDSLPLEERAALKSRQGVQVLCMEKVDVRDP
ETMENVPADGKSIGEIVCRGNTVMSGYLKDVKATEEAFKGGWFHTGDVAVKHPDGYIEIK
DRLKDIIISGGENISTLEVEGVLHSHPAVVEAAVVARPDDHWGQTPCAFVKLKEGSEEIT
SDEIIKYCRDHLPHYMAPRTVLFEDLPRTSTGKVQKIILREKAKALGSLFSTERNV*

Transcript Sequence

Transcript ID

Solyc07g043660.3.1
Transcript Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

GTTGGCTATGCTACCGGCGAAATTGATTGTCCAATTAATGTAACAGTAAATTGAATGGTC
GTCTTAGTATAAAAAAGAGCGATGAATTTAACTTTGTTGATACAAAACATATTTGCATAG
CTTCTCCATGACTACATTGTTAACAAGCTCAAATGTTGCATTGAGGTCCTTTAATGACCT
CAACCGATTAGTCCAATTACACCCTCGCACTCAAAGGGTCCAGCTGAGGTGCAAACTTGC
TGGTGACATCGAAACAGATGAGTCCCGAATATTACTGGAGGGTGTTGTTACAAGTTCCGC
TAATTATGTCCCATTGACACCAATAAGTTTCTTGGAGAGAGCAGCAGATGTTTTTGGCGA
TAGAACTTCGGTTGTGTTTGGGTCTAGTGTGAAGTATACATGGGAAGAGACACATTCTAG
GTGTCTAAAACTTGCTTCTGCTTTGGTTCAGCTGGGGATTTCAAGGGGAGATGTGGTTGC
AGCTTTGGCTCCGAATGTACCAGCAATGCAGGAGCTGCATTTTGCAGTACCAATGGCGGA
AGCAGTTCTCTGCACATTAAATACTCGTCTTGATTCATCAATGGTTGCTCATTTGCTGAA
ACATTCAGAAGCCAAGATAATATTTGTTGATCAACAATTGCTCCAAGTTGCTCAACAAGC
ACTCACTCTTCTTTCAAAACACAAAATTATTCTTGTGCTAATACCTGAATATGAGAATTC
CTCTTTGACATATGACATTCACGAATACGAAAAACTTCTGTCAAGTGGGAGTAGCAATTT
TACAATAAGATGGCCAAAAAGTGAATTTGATCCTATCAGTATCAATTATACTTCCGGTAC
AACATCCTCGCCCAAAGGGGTCGTGTACAATCACAGAGGCGCATATCTCAATTCAATTTC
TACTTTCCTATGTCATGGCATGGCTCCGATGCCAACGTACCTTTGGACACTTCCAATGTT
TCACTGCAATGGATGGTGCATGAATTGGGGAGTGGCTGCACTTGGTGGCACAAATGTTTG
CCTTAGACATGTCTCAGCGAAAGATATATTTGAAAGTATTTCTGTCAACAAGGTCACACA
TATGAGTGCAGCACCAATTGTCTTGAGTATGATGGCAAATGCTTCACCAAATGACAGGAA
ACCACTTCCCCATAAGGTCGATATACGGGTAGGCGGTTCACCACCGCCTCCACAAATTAT
TTCCAAAATGGAACAACTCGGATTTGGAGTATCCCATGGATATGGACTAACAGAAACTTA
TAGTGCTGCTACGAGTTGCTTGTGGAAGCCTGAGTGGGATTCTTTGCCCCTTGAGGAACG
AGCTGCGCTTAAATCAAGACAAGGGGTACAAGTTCTTTGTATGGAAAAAGTTGACGTTAG
AGACCCGGAGACCATGGAAAATGTGCCAGCTGATGGAAAGAGCATTGGTGAGATTGTGTG
CAGAGGAAATACTGTGATGAGTGGATATTTGAAAGATGTTAAAGCAACTGAAGAAGCTTT
TAAAGGCGGATGGTTTCATACTGGTGATGTTGCAGTGAAACATCCAGATGGATATATAGA
AATTAAGGATCGGCTGAAAGATATTATAATATCTGGAGGTGAAAACATAAGCACACTCGA
AGTGGAAGGAGTATTACATAGTCATCCTGCAGTTGTTGAGGCAGCAGTAGTCGCACGACC
AGATGATCATTGGGGACAAACACCTTGTGCATTTGTAAAGCTGAAAGAAGGATCTGAAGA
AATAACTTCAGATGAAATAATTAAATATTGTAGAGATCATTTACCACATTACATGGCACC
TCGAACAGTCTTATTTGAAGATTTACCAAGAACTTCAACTGGCAAAGTACAAAAAATCAT
CTTGAGAGAGAAAGCAAAAGCTTTGGGCAGTCTTTTCAGCACTGAAAGAAATGTGTAATA
AGTACTACTTTTTTGTTCATTCAGTACTGGTATAGCTGTTTCAACCATAAAAAGAAAATA
TAATATCATT