Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g043640.3.1
CDS Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

ATGAATAAACTCTTCAAAGTGTCTCTCAGGTTCTTTAATGGCCTAAACCGAACCAATCAT
GGACTCCGTCACCTGTCTCAATTTGCTGCTGACTTTGAAACTAGATTACTGGAGGGTGTT
GTTACTAATTCCGCTAATTATGTTCCATTGACACCAATAAGTTTCTTGGAAAGAGCAGCA
GATGTTTATCGCGATAGGACTTCGGTTGTGTTTGGGTCTAGTGTGAAGTATACATGGGAA
GAGACACATTCTAGGTGTCTAAAACTTGCTTCTGCTTTGGTTCAGCTGGGGATTTCAAGG
GGAGATGTGGTTGCAGCTTTGGCTCCGAATGTACCAGCAATGCAGGAGCTGCATTTTGCA
GTACCAATGGCAGAAGCAGTTCTTTGTACATTAAATACTCGTCTTGATTCATCAATGGTT
GCTAACTTGCTTAAGCATTCAGAAGCGAAGATCATATTCGTTGATCAACAATTGCTCCAA
GTTGCTCAACAAGCACTCACTCTTCTTTCAAAAGACAAAATTAAAACACCAATTCTAGTG
CTAATACCTGAATATGAGAATTCCTCTTCGACATATGACATTCACACATACGAAAATCTT
TTGTCTAGTGGGAGTAGCAATTTTACAATAAGATGGCCAAAAAGTGAATTTGATCCGATC
AGTATCAATTATACTTCTGGCACAATGTCCTCACCCAAAGGGGTCGTGTACAATCACAGA
GGTGCATATCTCAATGCAATTGCTACTTTCCTCAGCCATGGCATGGGCTCGATGCCTACA
TACCTTTGGACAGTTCCAATGTTTCACTGCAACGGATGGTGCATGGTTTGGGGAATGGCT
GCACTTGGTGGCACAAACGTTTGCCTAAGGAATGTCTCTGCAAAAGATATATTTCAAAAT
ATTTCTCTGTACAAGGTCAACCATATGAGTGCAGCACCAACTGTCTTGAATATGATGGCA
AATTGTCCACCAAATGACAGGAAGCCACTCCCCCATAAGGTCGAAATATTTACAGGCGGA
TCACCAGCGCCTCCACAGATCCTTTCCAAAATAGAGGAGCTTGGCTTTGGTGTAACTCAC
GCATATGGACTAACAGAAACTTATAGTGCTGCTACGAGTTGCTTGTGGAAGCCTGAGTGG
GATTCTTTGCCCCTTGAGGAACGAGCTGCGCTTAAATCAAGACAAGGGGTGCAAGTTCTT
TGTGTAGAAAAAGTTGAAGTTAGAGACCCCGAGACCATGGAAAAGGTGCCAGCCGATGGA
AAGAGCATTGGTGAAATTGTGTGCAGAGGAAACACTGTGATGAGTGGATATTTGAAAGAT
GCTAAAGCAACCGAAGAAGCTTTTAAAGGCGGATGGTTTCATAGTGGTGATCTTGCTGTA
AAACATCCAGATGGGTACATAGAAATTAAGGATCGGTTGAAAGACATTATAATTTCTGGA
GGTGAAAATATAAGCACACTTGAAGTGGAAAGAGTTTTGTATAGTCATCCAGCAGTCATT
GAAGCAGCCGTAGTTGCACGGCCAGATGATCGATGGGGACAAACACCTTGTGCATTCATA
ACACTAAAGGAAGGATTTGATGAAATTACTGAGGAACAGATAATCAACTTCTGTAGAGAT
CATTTGCCTCGTTACATGGCACCTCGAACAGTCCTTTTTGAAGATTTACCAAAAACATCA
ACTGGCAAGGTACAAAAATTCATATTGAGGGAGAAAGCAAAAGCTTTGGGCAGTCTGTTT
TCCACTGAAAAAAGAAGTGCTGCAAGTTGTTAA

Peptide Sequence

PEP ID

Solyc07g043640.3.1
PEP Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

MNKLFKVSLRFFNGLNRTNHGLRHLSQFAADFETRLLEGVVTNSANYVPLTPISFLERAA
DVYRDRTSVVFGSSVKYTWEETHSRCLKLASALVQLGISRGDVVAALAPNVPAMQELHFA
VPMAEAVLCTLNTRLDSSMVANLLKHSEAKIIFVDQQLLQVAQQALTLLSKDKIKTPILV
LIPEYENSSSTYDIHTYENLLSSGSSNFTIRWPKSEFDPISINYTSGTMSSPKGVVYNHR
GAYLNAIATFLSHGMGSMPTYLWTVPMFHCNGWCMVWGMAALGGTNVCLRNVSAKDIFQN
ISLYKVNHMSAAPTVLNMMANCPPNDRKPLPHKVEIFTGGSPAPPQILSKIEELGFGVTH
AYGLTETYSAATSCLWKPEWDSLPLEERAALKSRQGVQVLCVEKVEVRDPETMEKVPADG
KSIGEIVCRGNTVMSGYLKDAKATEEAFKGGWFHSGDLAVKHPDGYIEIKDRLKDIIISG
GENISTLEVERVLYSHPAVIEAAVVARPDDRWGQTPCAFITLKEGFDEITEEQIINFCRD
HLPRYMAPRTVLFEDLPKTSTGKVQKFILREKAKALGSLFSTEKRSAASC*

Transcript Sequence

Transcript ID

Solyc07g043640.3.1
Transcript Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

TCAACGATAATCTTCTCGACTTCGAGTATAAGTATTTATTGCATTTGTTTTTCTTCAGAA
TGTTTATAGCGTGATCAATTTTCAAATAATTAACTGGTTTCTACGGTGATGTTATGCTGC
CCCACTAACCAAGCATTTCCTCACGATCACTTCATTACTTCATCTATACATAGAGTTTCA
GTAAATTAAAGGTTCACCTTATTTTTCAAGCCTTCTCTCTGTTAACATCTTGTCCTCTGC
ATTATTCTACCATGAATAAACTCTTCAAAGTGTCTCTCAGGTTCTTTAATGGCCTAAACC
GAACCAATCATGGACTCCGTCACCTGTCTCAATTTGCTGCTGACTTTGAAACTAGATTAC
TGGAGGGTGTTGTTACTAATTCCGCTAATTATGTTCCATTGACACCAATAAGTTTCTTGG
AAAGAGCAGCAGATGTTTATCGCGATAGGACTTCGGTTGTGTTTGGGTCTAGTGTGAAGT
ATACATGGGAAGAGACACATTCTAGGTGTCTAAAACTTGCTTCTGCTTTGGTTCAGCTGG
GGATTTCAAGGGGAGATGTGGTTGCAGCTTTGGCTCCGAATGTACCAGCAATGCAGGAGC
TGCATTTTGCAGTACCAATGGCAGAAGCAGTTCTTTGTACATTAAATACTCGTCTTGATT
CATCAATGGTTGCTAACTTGCTTAAGCATTCAGAAGCGAAGATCATATTCGTTGATCAAC
AATTGCTCCAAGTTGCTCAACAAGCACTCACTCTTCTTTCAAAAGACAAAATTAAAACAC
CAATTCTAGTGCTAATACCTGAATATGAGAATTCCTCTTCGACATATGACATTCACACAT
ACGAAAATCTTTTGTCTAGTGGGAGTAGCAATTTTACAATAAGATGGCCAAAAAGTGAAT
TTGATCCGATCAGTATCAATTATACTTCTGGCACAATGTCCTCACCCAAAGGGGTCGTGT
ACAATCACAGAGGTGCATATCTCAATGCAATTGCTACTTTCCTCAGCCATGGCATGGGCT
CGATGCCTACATACCTTTGGACAGTTCCAATGTTTCACTGCAACGGATGGTGCATGGTTT
GGGGAATGGCTGCACTTGGTGGCACAAACGTTTGCCTAAGGAATGTCTCTGCAAAAGATA
TATTTCAAAATATTTCTCTGTACAAGGTCAACCATATGAGTGCAGCACCAACTGTCTTGA
ATATGATGGCAAATTGTCCACCAAATGACAGGAAGCCACTCCCCCATAAGGTCGAAATAT
TTACAGGCGGATCACCAGCGCCTCCACAGATCCTTTCCAAAATAGAGGAGCTTGGCTTTG
GTGTAACTCACGCATATGGACTAACAGAAACTTATAGTGCTGCTACGAGTTGCTTGTGGA
AGCCTGAGTGGGATTCTTTGCCCCTTGAGGAACGAGCTGCGCTTAAATCAAGACAAGGGG
TGCAAGTTCTTTGTGTAGAAAAAGTTGAAGTTAGAGACCCCGAGACCATGGAAAAGGTGC
CAGCCGATGGAAAGAGCATTGGTGAAATTGTGTGCAGAGGAAACACTGTGATGAGTGGAT
ATTTGAAAGATGCTAAAGCAACCGAAGAAGCTTTTAAAGGCGGATGGTTTCATAGTGGTG
ATCTTGCTGTAAAACATCCAGATGGGTACATAGAAATTAAGGATCGGTTGAAAGACATTA
TAATTTCTGGAGGTGAAAATATAAGCACACTTGAAGTGGAAAGAGTTTTGTATAGTCATC
CAGCAGTCATTGAAGCAGCCGTAGTTGCACGGCCAGATGATCGATGGGGACAAACACCTT
GTGCATTCATAACACTAAAGGAAGGATTTGATGAAATTACTGAGGAACAGATAATCAACT
TCTGTAGAGATCATTTGCCTCGTTACATGGCACCTCGAACAGTCCTTTTTGAAGATTTAC
CAAAAACATCAACTGGCAAGGTACAAAAATTCATATTGAGGGAGAAAGCAAAAGCTTTGG
GCAGTCTGTTTTCCACTGAAAAAAGAAGTGCTGCAAGTTGTTAACCTATATAATTAAATG
TGTGTGTATTTACTTTGGCTCTTCATTGTTTACTATTTCAACATTGCATACATGTTTGAA
GCATTAAATTGTTTATTTTTCATGGAGCACTGAATAGTTCACTTTGGAATATCTGGATTA
ATTTTCTATGGAAATTGTTCTGTTGTTTCAA