Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g043420.3.1
CDS Infomation

2-oxoglutarate-dependent dioxygenase 2
Sequence

ATGGCGGATCTTCTCTCGAACTGGTCAAGCACATTAGAAGCAGTTCCTAAAAGTCATTGC
ATCCCAGAGCATGAAAGACCATCAGATCCAGTTGAAATTGGCGACAGTATTCCAGTCATT
GATTTGGGAAAAGCTAATGGTGAAGAACGAAGTGTTGTTGTTAAAGATCTGTTGAAAGCT
TTTGAAGAATATGGGTTTTTTCAGATAATCAATCATGGAGTACCTGTAGATCTAATGGAT
GAAGCAATGAAAGTGTACAAAGAATTTTTCAGTCTTCCAGCTGAAGAAAAAGAAAATTAT
GCAAAAGATGCAGCTAATAATACCAATAGGGGTGCAGCTACACTGTACAGTAGCAGTGCT
AAGCATTATGATTCAGAGGAGCATCGTTACTGGAGAGATGTGTTGGAACATAGCTGCAAT
CTTGATGGAGAAGACAAAAAAACTTGGCCCGATAACCCTCCAAGATATAGGGAGGTTATT
GGTGCCTATGGTGATGAATTGAGAAGGGTGAGCAAAGTTATCTTGGGTATGTTAAGTGAA
GGGCTAGGTTTGGAGGCAGGGTTCTTTGACAAAGAACTTGGGCAGAGAATGCTTGTGAAT
CACTATCCAGCATGTCCAAATCCAAGTTTAACTTTGGGAGTTGGTGGACATTGTGATCCT
AATCTCATAACCATTATCCAACAAGAAGTCTATGGTCTTCAAATATTGAAGGATGACAAA
TGGATTGGTGTGCAGCCTATTCGCAATGCATTTGTGGTTAATTCTGGTTTACCAATTACG
GTATATAGCAATGGAAAGCTAACTAGTGTTGCACATCGTGTGGTGACAAACACAACTGAG
TCACGAACCTCCATTGGTACTTTTATTTGCCCACATGAGATTGTTGAACCTGCAAAAGCA
CTTGTTGGTCCTGAGAATCCTCCACAGTTCAAACCCTTCCATTGGGGAATCGATTTTATG
CCACATTACCTCAGCAAGAAATCAGTGTACCACGCTTCATTGGAGCCCTTCAAAACAGAA
GCTAATTAA

Peptide Sequence

PEP ID

Solyc07g043420.3.1
PEP Infomation

2-oxoglutarate-dependent dioxygenase 2
Sequence

MADLLSNWSSTLEAVPKSHCIPEHERPSDPVEIGDSIPVIDLGKANGEERSVVVKDLLKA
FEEYGFFQIINHGVPVDLMDEAMKVYKEFFSLPAEEKENYAKDAANNTNRGAATLYSSSA
KHYDSEEHRYWRDVLEHSCNLDGEDKKTWPDNPPRYREVIGAYGDELRRVSKVILGMLSE
GLGLEAGFFDKELGQRMLVNHYPACPNPSLTLGVGGHCDPNLITIIQQEVYGLQILKDDK
WIGVQPIRNAFVVNSGLPITVYSNGKLTSVAHRVVTNTTESRTSIGTFICPHEIVEPAKA
LVGPENPPQFKPFHWGIDFMPHYLSKKSVYHASLEPFKTEAN*

Transcript Sequence

Transcript ID

Solyc07g043420.3.1
Transcript Infomation

2-oxoglutarate-dependent dioxygenase 2
Sequence

CTCCATATCTCAAATGAGATATCAAACAATTTGCAGAAGTAGTAGTATTAACATTTAGAA
GATAACTTTGTTTCCCAGATTGATTGTCAATGGCGGATCTTCTCTCGAACTGGTCAAGCA
CATTAGAAGCAGTTCCTAAAAGTCATTGCATCCCAGAGCATGAAAGACCATCAGATCCAG
TTGAAATTGGCGACAGTATTCCAGTCATTGATTTGGGAAAAGCTAATGGTGAAGAACGAA
GTGTTGTTGTTAAAGATCTGTTGAAAGCTTTTGAAGAATATGGGTTTTTTCAGATAATCA
ATCATGGAGTACCTGTAGATCTAATGGATGAAGCAATGAAAGTGTACAAAGAATTTTTCA
GTCTTCCAGCTGAAGAAAAAGAAAATTATGCAAAAGATGCAGCTAATAATACCAATAGGG
GTGCAGCTACACTGTACAGTAGCAGTGCTAAGCATTATGATTCAGAGGAGCATCGTTACT
GGAGAGATGTGTTGGAACATAGCTGCAATCTTGATGGAGAAGACAAAAAAACTTGGCCCG
ATAACCCTCCAAGATATAGGGAGGTTATTGGTGCCTATGGTGATGAATTGAGAAGGGTGA
GCAAAGTTATCTTGGGTATGTTAAGTGAAGGGCTAGGTTTGGAGGCAGGGTTCTTTGACA
AAGAACTTGGGCAGAGAATGCTTGTGAATCACTATCCAGCATGTCCAAATCCAAGTTTAA
CTTTGGGAGTTGGTGGACATTGTGATCCTAATCTCATAACCATTATCCAACAAGAAGTCT
ATGGTCTTCAAATATTGAAGGATGACAAATGGATTGGTGTGCAGCCTATTCGCAATGCAT
TTGTGGTTAATTCTGGTTTACCAATTACGGTATATAGCAATGGAAAGCTAACTAGTGTTG
CACATCGTGTGGTGACAAACACAACTGAGTCACGAACCTCCATTGGTACTTTTATTTGCC
CACATGAGATTGTTGAACCTGCAAAAGCACTTGTTGGTCCTGAGAATCCTCCACAGTTCA
AACCCTTCCATTGGGGAATCGATTTTATGCCACATTACCTCAGCAAGAAATCAGTGTACC
ACGCTTCATTGGAGCCCTTCAAAACAGAAGCTAATTAAGCATTAAGGATATATCAAATCT
ATGCTGCTGCTGCTACTACTTCTTTTAATTTCCACTGAAATAAGAGCTTTAATTCAAAAT
GTCTTTCTAGTTTGTATTCTACTTACTTCATGAATAAGAAACTTCCAATCCTATTCTCTA
CTGGTTTCGATCTACATGAATATTTT