Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g043310.3.1
CDS Infomation

Gamma aminobutyrate transaminase isoform 1
Sequence

ATGGCCAAGATTTCTCGTCTTTTTGGATCCACCGTGAAAGCAGCTATCACCGCCCAGGCT
GGTTTCCATGGAAAACGTATTCCAGCAGTTAGCAGTTTACAGGAGCATATTGTTAAATCA
ACACCGGCAAGATATAACAGTACACAGGCATGTTTGGAAAATGATATTTCTGGAACTGAT
AATAAAGGGTTCAAGGGTCATGATATGTTGGCACCCTTCACTGCTGGGTGGCAAAGTACT
GATGTTGATCCTTTGATTATAGAGAAGTCTGAGGGATCCCATGTCTATGACATGCAAGGG
AGGAAGTATATTGATACTCTAGCTGGTTTGTGGTGCACAGCACTAGGGGGGAACGAGCCT
CGCCTGGTTGATGCTGCCACTAAGCAATTAAACACATTGCCGTTTTACCATTCATTTTGG
AACCGTACAACAAAACCTTCTTTGGATCTTGCGAAGGAGCTTCTAGATATGTTCACTGCA
AAGAAAATGGCAAAAGCTTTTTTCACCAATAGTGGATCAGAAGCCAATGATACCCAGGTG
AAGCTGGTCTGGTATTATAACAATGCTCTTGGAAGGCCAAACAAAAAGAAATTTATAGCT
CGAGCAAAAGCATATCATGGTTCAACTCTTATTTCTGCCAGTCTCACTGGCCTTCCTGCA
TTACATCAAAATTTTGATCTTCCTGCTCCATTTGTTCTTCACACCGACTGTCCTCATTAT
TGGCGTTATCATCTGCCAGGTGAGACAGAGGAGGAGTTCTCCACCAGGTTGGCTAAAAAT
TTAGAAGATCTTATCCTCAAAGAGGGGCCTGAAACAATAGCTGCTTTTATTGCTGAACCA
GTCATGGGGGCAGGAGGTGTCATACCTCCTCCAGCTACCTATTTTGATAAGATCCAAGCT
GTAGTGAAGAAATATGACATTCTTTTCATTGCGGATGAGGTCATCTGTGCCTTTGGGAGG
CTTGGAACAATGTTTGGCTCTGACATGTATAACATCAAACCTGATCTTGTCACCTTAGCA
AAGGCTCTTTCTTCTGCATATATGCCTATTGGAGCTGTCCTTGTAAGCCCCGAAGTTTCT
GATGTAATTCATTCTCAAAGCAATAAACTTGGTTCCTTTTCCCATGGATTCACTTATTCT
GGGCATCCTGTTGCATGCGCAGTGGCATTGGAAGCTATTAAAATCTACAAGGAGCGAAAT
ATGGTTGAGAGAGTAAATAGAATATCCCCAAAGTTTCAAGAAGGTCTGAAGGCATTTTCT
GACAGTCCCATTATCGGAGAGATTAGGGGACTTGGTTTGATCCTTGCCACAGAGTTTGCG
AACAACAAATCTCCTAATGATCCTTTCCCTCCCGAATGGGGTGTTGGTGCATATTTTGGA
GCGCAATGTCAGAAGAATGGCATGTTGGTACGAGTTGCTGGTGATACCATCATGATGTCT
CCTCCATTTGTAGTTACTCCAGAAGAACTTGACGAGTTGATTAGAATCTATGGGAAAGCA
TTGAGGGAAACTGAAAAGAGAGTAGAAGAACTCAAGTCTCAGAAGTAA

Peptide Sequence

PEP ID

Solyc07g043310.3.1
PEP Infomation

Gamma aminobutyrate transaminase isoform 1
Sequence

MAKISRLFGSTVKAAITAQAGFHGKRIPAVSSLQEHIVKSTPARYNSTQACLENDISGTD
NKGFKGHDMLAPFTAGWQSTDVDPLIIEKSEGSHVYDMQGRKYIDTLAGLWCTALGGNEP
RLVDAATKQLNTLPFYHSFWNRTTKPSLDLAKELLDMFTAKKMAKAFFTNSGSEANDTQV
KLVWYYNNALGRPNKKKFIARAKAYHGSTLISASLTGLPALHQNFDLPAPFVLHTDCPHY
WRYHLPGETEEEFSTRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQA
VVKKYDILFIADEVICAFGRLGTMFGSDMYNIKPDLVTLAKALSSAYMPIGAVLVSPEVS
DVIHSQSNKLGSFSHGFTYSGHPVACAVALEAIKIYKERNMVERVNRISPKFQEGLKAFS
DSPIIGEIRGLGLILATEFANNKSPNDPFPPEWGVGAYFGAQCQKNGMLVRVAGDTIMMS
PPFVVTPEELDELIRIYGKALRETEKRVEELKSQK*

Transcript Sequence

Transcript ID

Solyc07g043310.3.1
Transcript Infomation

Gamma aminobutyrate transaminase isoform 1
Sequence

AAGAAGAATCCAAATCGAAATATGACACTTGAATGGATGGGTACCGAAGGAAGTTAGTAG
TGCTTTCTTTTTATACGACTTATTCATGATTATTAAAAACTCATATGTGGTGTCATCACT
GAGTTGGAGTCCCTTTTAATCAATTTTTTTTTTCTCTCTCTTTTGGCTGGGTCTTTTATT
TTTTTTTTCTCTATATATATTGCACCTTCATTTTTTTCTATGCATGTTTTATTTTTACAA
TATTTGATTTGTAATTAAACAACAAATTGATTCGAAGGATTTTATCAAATGGCCAAGATT
TCTCGTCTTTTTGGATCCACCGTGAAAGCAGCTATCACCGCCCAGGCTGGTTTCCATGGA
AAACGTATTCCAGCAGTTAGCAGTTTACAGGAGCATATTGTTAAATCAACACCGGCAAGA
TATAACAGTACACAGGCATGTTTGGAAAATGATATTTCTGGAACTGATAATAAAGGGTTC
AAGGGTCATGATATGTTGGCACCCTTCACTGCTGGGTGGCAAAGTACTGATGTTGATCCT
TTGATTATAGAGAAGTCTGAGGGATCCCATGTCTATGACATGCAAGGGAGGAAGTATATT
GATACTCTAGCTGGTTTGTGGTGCACAGCACTAGGGGGGAACGAGCCTCGCCTGGTTGAT
GCTGCCACTAAGCAATTAAACACATTGCCGTTTTACCATTCATTTTGGAACCGTACAACA
AAACCTTCTTTGGATCTTGCGAAGGAGCTTCTAGATATGTTCACTGCAAAGAAAATGGCA
AAAGCTTTTTTCACCAATAGTGGATCAGAAGCCAATGATACCCAGGTGAAGCTGGTCTGG
TATTATAACAATGCTCTTGGAAGGCCAAACAAAAAGAAATTTATAGCTCGAGCAAAAGCA
TATCATGGTTCAACTCTTATTTCTGCCAGTCTCACTGGCCTTCCTGCATTACATCAAAAT
TTTGATCTTCCTGCTCCATTTGTTCTTCACACCGACTGTCCTCATTATTGGCGTTATCAT
CTGCCAGGTGAGACAGAGGAGGAGTTCTCCACCAGGTTGGCTAAAAATTTAGAAGATCTT
ATCCTCAAAGAGGGGCCTGAAACAATAGCTGCTTTTATTGCTGAACCAGTCATGGGGGCA
GGAGGTGTCATACCTCCTCCAGCTACCTATTTTGATAAGATCCAAGCTGTAGTGAAGAAA
TATGACATTCTTTTCATTGCGGATGAGGTCATCTGTGCCTTTGGGAGGCTTGGAACAATG
TTTGGCTCTGACATGTATAACATCAAACCTGATCTTGTCACCTTAGCAAAGGCTCTTTCT
TCTGCATATATGCCTATTGGAGCTGTCCTTGTAAGCCCCGAAGTTTCTGATGTAATTCAT
TCTCAAAGCAATAAACTTGGTTCCTTTTCCCATGGATTCACTTATTCTGGGCATCCTGTT
GCATGCGCAGTGGCATTGGAAGCTATTAAAATCTACAAGGAGCGAAATATGGTTGAGAGA
GTAAATAGAATATCCCCAAAGTTTCAAGAAGGTCTGAAGGCATTTTCTGACAGTCCCATT
ATCGGAGAGATTAGGGGACTTGGTTTGATCCTTGCCACAGAGTTTGCGAACAACAAATCT
CCTAATGATCCTTTCCCTCCCGAATGGGGTGTTGGTGCATATTTTGGAGCGCAATGTCAG
AAGAATGGCATGTTGGTACGAGTTGCTGGTGATACCATCATGATGTCTCCTCCATTTGTA
GTTACTCCAGAAGAACTTGACGAGTTGATTAGAATCTATGGGAAAGCATTGAGGGAAACT
GAAAAGAGAGTAGAAGAACTCAAGTCTCAGAAGTAATATTAGTTGACAGCACAAGCTTGA
CGATGGCGAAAAATAAAATCAAATGTGTTTGGATATTCTGTAAATGTCCAGAATGAAGTA
AAGAAAGTAATATAATTTTTAGTCCAAGTTGTTTTCTCTTTCATTTTACATGCAGTATAG
TTGCACCAGTTGACTTGTTGATGAATATATGTATCCCCTTAACCAGTAATCACCAAATTG
CATTTCACAAAAAAATCGAATTATCAATCTATATTCTTGTAATTAATTGGGTTTTTATAT
GTTTGAGTTGGTATGGTAGTGCACATTTCTCCTGAAGTCTTTTCTGTCAAAGAAAGAATA
TTTTCTTAGAAGTTACATGTTTTATCATGATCTACCATTT