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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g043240.3.1
CDS Infomation

Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC)
Sequence

ATGAATCCTAAGGCCATATATTTCCCAATTTTAATAGCAATCTTTGCCGTTTTAGCATCA
ACTCAACCACCCCGAACGTACTTCAACTGTTTTCTTGATCGATGCTCTACAGCTTTATCG
TTATTTACTGTTAATCGTCATCACCATCACCATCATGATCATCATCGTCATGACACTGAT
GATGATAAGACAAGACAATCGCCCTGTGACCAATTTGCTCCAAATTTTCCGACTATAGAC
CCTAGTAACACGTCAATTATCTGCGTTGATCATAATGGATGTTGCAATTTCACCACAGTG
CAAGCTGCAGTTGATTCTGTTGGGAACTTTAGTGCCAAAAGAAGCTTAATATGGATAAGC
AATGGCATTTATTTTGAAAAGGTGATTATTCCAAAAACAAAACCTAACATAACATTTCAA
GGGCAGGGGTATACGACAACAGCTATCGTGTGGAATGACACAGCCAATTCTGCAAATGGA
ACATTTTATAGTGGCTCTGTCCAAGTTTTCTCTACTAACTTCATTGCCAAGAATATAAGT
TTCATGAATGTAGCTCCAATGCCGGTACCTGGGGCAGTCGGAGCACAAGCAGTGGCGATT
AGGATAGGCGGAGATGAAGCTGCCTTTTGGGGTTGTGGATTTTTCGGAGCTCAGGATACC
CTTCATGACGATCGCGGTCGTCATTACTTTAAGGATTGTTACATTCAAGGCTCTATCGAC
TTCATTTTTGGAAATGGCAAATCAATCTACGAGAACTGTCAATTAATATCAATAGCAAGC
CCAGTAGCCCCAGGAGTGAAGTCGATAAACGGGGCAGTAACTGCACACGGAAGAGCTACT
AAAGATGAAAATAGTGGCTTCGTTTTCGTGAATTGCACTTTAGGAGGCACCGGTAGAATT
TGGTTGGGGCGGGCCTGGAGGTCTTACTCTACCGTTGTATTTGCTAACACCTTCATGACC
GATATCGTGGCTCCTGAGGGTTGGAACGACTTGAACGACCCTACCAGAGACCAGACAATT
TTTTATGGGGAGTATAATTGCTCCGGAGCAGGATCCAATATGGCGTTGAGGGCACCATAT
GTTCAAAGACTTAATGATACACAAGCTCTTCCATTTCTCAACTCCTCTTTTATTGATGCT
GATTTATGGCTTCAACCTTTCTCATCTTAG

Peptide Sequence

PEP ID

Solyc07g043240.3.1
PEP Infomation

Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC)
Sequence

MNPKAIYFPILIAIFAVLASTQPPRTYFNCFLDRCSTALSLFTVNRHHHHHHDHHRHDTD
DDKTRQSPCDQFAPNFPTIDPSNTSIICVDHNGCCNFTTVQAAVDSVGNFSAKRSLIWIS
NGIYFEKVIIPKTKPNITFQGQGYTTTAIVWNDTANSANGTFYSGSVQVFSTNFIAKNIS
FMNVAPMPVPGAVGAQAVAIRIGGDEAAFWGCGFFGAQDTLHDDRGRHYFKDCYIQGSID
FIFGNGKSIYENCQLISIASPVAPGVKSINGAVTAHGRATKDENSGFVFVNCTLGGTGRI
WLGRAWRSYSTVVFANTFMTDIVAPEGWNDLNDPTRDQTIFYGEYNCSGAGSNMALRAPY
VQRLNDTQALPFLNSSFIDADLWLQPFSS*

Transcript Sequence

Transcript ID

Solyc07g043240.3.1
Transcript Infomation

Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC)
Sequence

ATTATTGTCACCCTATTTATTTATCGTTCCATCAAGAAAAATGAATCCTAAGGCCATATA
TTTCCCAATTTTAATAGCAATCTTTGCCGTTTTAGCATCAACTCAACCACCCCGAACGTA
CTTCAACTGTTTTCTTGATCGATGCTCTACAGCTTTATCGTTATTTACTGTTAATCGTCA
TCACCATCACCATCATGATCATCATCGTCATGACACTGATGATGATAAGACAAGACAATC
GCCCTGTGACCAATTTGCTCCAAATTTTCCGACTATAGACCCTAGTAACACGTCAATTAT
CTGCGTTGATCATAATGGATGTTGCAATTTCACCACAGTGCAAGCTGCAGTTGATTCTGT
TGGGAACTTTAGTGCCAAAAGAAGCTTAATATGGATAAGCAATGGCATTTATTTTGAAAA
GGTGATTATTCCAAAAACAAAACCTAACATAACATTTCAAGGGCAGGGGTATACGACAAC
AGCTATCGTGTGGAATGACACAGCCAATTCTGCAAATGGAACATTTTATAGTGGCTCTGT
CCAAGTTTTCTCTACTAACTTCATTGCCAAGAATATAAGTTTCATGAATGTAGCTCCAAT
GCCGGTACCTGGGGCAGTCGGAGCACAAGCAGTGGCGATTAGGATAGGCGGAGATGAAGC
TGCCTTTTGGGGTTGTGGATTTTTCGGAGCTCAGGATACCCTTCATGACGATCGCGGTCG
TCATTACTTTAAGGATTGTTACATTCAAGGCTCTATCGACTTCATTTTTGGAAATGGCAA
ATCAATCTACGAGAACTGTCAATTAATATCAATAGCAAGCCCAGTAGCCCCAGGAGTGAA
GTCGATAAACGGGGCAGTAACTGCACACGGAAGAGCTACTAAAGATGAAAATAGTGGCTT
CGTTTTCGTGAATTGCACTTTAGGAGGCACCGGTAGAATTTGGTTGGGGCGGGCCTGGAG
GTCTTACTCTACCGTTGTATTTGCTAACACCTTCATGACCGATATCGTGGCTCCTGAGGG
TTGGAACGACTTGAACGACCCTACCAGAGACCAGACAATTTTTTATGGGGAGTATAATTG
CTCCGGAGCAGGATCCAATATGGCGTTGAGGGCACCATATGTTCAAAGACTTAATGATAC
ACAAGCTCTTCCATTTCTCAACTCCTCTTTTATTGATGCTGATTTATGGCTTCAACCTTT
CTCATCTTAGCATTTCTCCTTCTTTGTATTTTTTTTCGATTTAATTATAACGTTATGTGT
GATGCGCTCCATCGTGAAATAATTTTAGAATTGAACGACATTGGTGTAAATTATTCTGGA
TTTCTCTTGTATATATATACATACATATCCATTTGATACTAGTATAGATCATCAAAATCA
TTTTTATTTTATTTTTTTACATAAAACCCCTTCATG