Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g042250.3.1
CDS Infomation

chaperonin 21 precursor
Sequence

ATGGCGTCCACTCAGCTAACAGCATCCTCTATCTCTGGCAATGGTTTTGCATCCTTTGAA
GGGCTCAGGTCCACTTGCATTGTAAAGACCGTATCTTTTGCTCCTTTGAAGCACAACAAC
AGCAGGTCTTTTAGTCGTCTTGTTGTCAAGGCGGCTACCACCGTAGCTCCTAAGTACACT
ACACTTAAGCCTTTGGGCGACAGAGTCTTGGTGAAGATTAAGACTGCAGAGGAGAAGACT
GTTGGTGGTATCCTACTTCCAGTATCAGTTCAGTCGAAACCTAATGGAGGTGAGGTGGTT
GCTGTTGGGGAGGGTCATTCAGCTGGCAAAACCAAAGTGGACATTAGTGTGAAGACTGGT
GCCCAAGTCATCTACTCGAAGTACGCAGGAACTGAGGTGGAGTTTGATGGATCAAAGCAC
CTCATTCTGAAAGAGGATGATATTGTTGGTATTCTTGAGACAGATGATGTCAAGGATCTG
CAGCCATTAAATGACAGAGTCCTAATCAAGGTTGCAGAAGCTGAAGAAAAAACCGCTGGA
GGTTTACTGTTGACTGAGGCAGCCAAGGAGAAGCCTTCAATTGGCACGATTATAGCTGTT
GGGCCTGGTCCTCTTGATGAAGAAGGGAACAGGAAACCACTTTCAGTATCCCCAGGAAAT
ACAGTTCTCTATTCCAAATATGCCGGCAGTGAATTCAAAGGTGCTGATGGATCTGATTAT
ATTACACTCAGGGTGTCTGATGTAATGGCTGTGCTATCTTAG

Peptide Sequence

PEP ID

Solyc07g042250.3.1
PEP Infomation

chaperonin 21 precursor
Sequence

MASTQLTASSISGNGFASFEGLRSTCIVKTVSFAPLKHNNSRSFSRLVVKAATTVAPKYT
TLKPLGDRVLVKIKTAEEKTVGGILLPVSVQSKPNGGEVVAVGEGHSAGKTKVDISVKTG
AQVIYSKYAGTEVEFDGSKHLILKEDDIVGILETDDVKDLQPLNDRVLIKVAEAEEKTAG
GLLLTEAAKEKPSIGTIIAVGPGPLDEEGNRKPLSVSPGNTVLYSKYAGSEFKGADGSDY
ITLRVSDVMAVLS*

Transcript Sequence

Transcript ID

Solyc07g042250.3.1
Transcript Infomation

chaperonin 21 precursor
Sequence

CTAGAAGCATCTTATTTTTTGCAGAAAAGTCCTCCTCTTGAACCTTCTAGGGTTTTGTTA
TCCTCTTCTTACCTACTCTCCTCCATATTTCCAACAATTTACTCCAGTTGAGAAGAAGAA
AAAACTTATCCAAATTCAGAAAAAAAATGGCGTCCACTCAGCTAACAGCATCCTCTATCT
CTGGCAATGGTTTTGCATCCTTTGAAGGGCTCAGGTCCACTTGCATTGTAAAGACCGTAT
CTTTTGCTCCTTTGAAGCACAACAACAGCAGGTCTTTTAGTCGTCTTGTTGTCAAGGCGG
CTACCACCGTAGCTCCTAAGTACACTACACTTAAGCCTTTGGGCGACAGAGTCTTGGTGA
AGATTAAGACTGCAGAGGAGAAGACTGTTGGTGGTATCCTACTTCCAGTATCAGTTCAGT
CGAAACCTAATGGAGGTGAGGTGGTTGCTGTTGGGGAGGGTCATTCAGCTGGCAAAACCA
AAGTGGACATTAGTGTGAAGACTGGTGCCCAAGTCATCTACTCGAAGTACGCAGGAACTG
AGGTGGAGTTTGATGGATCAAAGCACCTCATTCTGAAAGAGGATGATATTGTTGGTATTC
TTGAGACAGATGATGTCAAGGATCTGCAGCCATTAAATGACAGAGTCCTAATCAAGGTTG
CAGAAGCTGAAGAAAAAACCGCTGGAGGTTTACTGTTGACTGAGGCAGCCAAGGAGAAGC
CTTCAATTGGCACGATTATAGCTGTTGGGCCTGGTCCTCTTGATGAAGAAGGGAACAGGA
AACCACTTTCAGTATCCCCAGGAAATACAGTTCTCTATTCCAAATATGCCGGCAGTGAAT
TCAAAGGTGCTGATGGATCTGATTATATTACACTCAGGGTGTCTGATGTAATGGCTGTGC
TATCTTAGTGGGACTATTGAGTTATTCCGTGCCAAAAATTTCAGCAGAGATCTAGGAAGG
AGGAAGAGCTGCATCCAACTTTCGAGTGAGGAGTAATACTCTCTGCAAATTAATGATCAA
TATCTCAGGTGTAGAATCAATTTTCTGAACTCATTTCTGTTCTTGATTTGAGGAATTAGC
CTTTGGGAATTTTGTATGTCAAAAGATTGAAAACTGCAGACTATGAGAGATTAGCAATAA
TATTTGCATAATTCACATATTGGATTGTGTTCAAGCTGATGTTTGTCATTTTTGGGATCA
AGTTGTATATCCCTAGTCGCTAGTGGATCAAAGAGGTAGCTTATTTCGGGATCGCATTTT
TGGAAGCAAGCTTTAAACAATAGAGACAATATATATAGGAGAAAATAAAAAGTTGAAGTT
CAGCAATGTCAGTAGACAAGATTCCCACAACTGTCAAAGCTATACATTTTCTGTTAAATT
TAGTACACAATGGATATTTCTTCCTGTAATTGTCATGCCTGAATTACTAAGCTAATTTAC
ACCTACTTGATCTGAAAAATAATAATTAATAAATTTATAACTGCTTTGGACCTCACAATA
AAGTGGCAATCAAACTAATCTAATATCAACCCTGCC