Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g042020.3.1
CDS Infomation

TRICHOME BIREFRINGENCE-LIKE 16 (AHRD V3.3 *** AT5G20680.5)
Sequence

ATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCC
AGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAA
GACCGTGTCTTCCAGATTTCTCCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAA
AGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCT
TCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGAAGTGTA
GGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAAT
AGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATA
GAAAATATGACATCTGATTCAAAAGATCATGGTTGTAATTATGCTAAAGGTAGATGGGTC
ACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATG
TGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCA
AGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGATGGAGAACAAA
ACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATG
ATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTA
AAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACA
ACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAAC
CCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTA
CCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAAC
GCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGAT
ATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTG
CCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAAT
GGAGATTGGAACACTGGAGGCACCTGTGATAACACCACTCCGCTTTCTGGTGGAAAGGAG
GTTGTACAAGACGAATCTAGTGATGCTGGTGCAGCAGCGGCTGTAAAAGGAACAGCTGTG
AAGCTTTTGGACATCACAGCTTTGTCTCAGCTGAGAGATGAAGGTCATATATCTCGATAC
AGCATCAGATCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCA
GATACATGGAATGAAGTTCTTTTTGCTCAACTTTAA

Peptide Sequence

PEP ID

Solyc07g042020.3.1
PEP Infomation

TRICHOME BIREFRINGENCE-LIKE 16 (AHRD V3.3 *** AT5G20680.5)
Sequence

MKGGLKVPLISLILIGFVCASIIILAYVKSPFLSYWTSSQDRVFQISPDYKVKDEEVLKE
RNRSGQSEENVNFESAISHSSMKDKVTEEPITNTEIEGSVGIPLNFTQKGGDLKALGEKN
SSREQENEVAAPLDSAGVAIENMTSDSKDHGCNYAKGRWVTDDSRPLYSGFRCKRWLSAM
WACRLTQRTDFEYEKLRWRPRDCEIEEFTGVKFLKRMENKTLAFIGDSLGRQQFQSLMCM
ITGGEDRPDVLDVGREYGLVKARHAVRPDGWAYRFPRTQTTILYYWSASLCNLTPINASN
PLTDYAMHLDRPPAFLSRFLPRFDVLVLNTGHHWNRGKLNANRWVMYVDGVPNTNRKIAD
INGAKNLTIHSIIKWVDSQLPKYPGLKAFYRSISPRHFFNGDWNTGGTCDNTTPLSGGKE
VVQDESSDAGAAAAVKGTAVKLLDITALSQLRDEGHISRYSIRSTPGMQDCLHWCLPGVP
DTWNEVLFAQL*

Transcript Sequence

Transcript ID

Solyc07g042020.3.1
Transcript Infomation

TRICHOME BIREFRINGENCE-LIKE 16 (AHRD V3.3 *** AT5G20680.5)
Sequence

TATATACTCATAAAATTTCTACACGAAATCGTTTGCAATTTAAAAAAATTACATAATTAT
AATTCATGGTAATTATATAATTTTTTTGGCATTTCTAACAAGTGCGTAATTGTAGCCCAG
CTGATTTCTAAGTTAAAAGTCAAAGTGTTATATAAATAATTTCCTTCATTTTCCTCTATC
CGCGATCTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACC
TTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTG
CATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTC
TGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGCTATTTCAGATTCTA
AACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATG
CATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTG
TCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACAT
CATCTCAAGACCGTGTCTTCCAGATTTCTCCAGATTATAAAGTGAAAGATGAAGAAGTTT
TAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTT
CACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG
GAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAG
AAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCG
TCGCTATAGAAAATATGACATCTGATTCAAAAGATCATGGTTGTAATTATGCTAAAGGTA
GATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGT
CAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTT
GGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGATGG
AGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTA
TGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATG
GTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGA
CCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATG
CCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTC
GTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCA
AGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAA
TAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATT
CACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATT
TTTTTAATGGAGATTGGAACACTGGAGGCACCTGTGATAACACCACTCCGCTTTCTGGTG
GAAAGGAGGTTGTACAAGACGAATCTAGTGATGCTGGTGCAGCAGCGGCTGTAAAAGGAA
CAGCTGTGAAGCTTTTGGACATCACAGCTTTGTCTCAGCTGAGAGATGAAGGTCATATAT
CTCGATACAGCATCAGATCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTG
GTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCA
AGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAAT
AATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATG
GGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTA
TTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGG
GTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAG
TGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTA
ATTCATTTTTATCCTTTTATTTATAAAAATCACGACCACCTAAATTTTT