Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g041300.2.1
CDS Infomation	Spermidine synthase (AHRD V3.3 *** F8WLB6_CITUN)
Sequence	ATGGAGCAAACAATTGAGAATGAAATTGCTGACTCAAATGCAAAGAATGTAGAGTGGTTT GAAGAGTCTCTTGGAGTAGATCTCAAATGGTCTTTAGCCATAAACAGTGTCTTGTACAAA GCAACCACCAAGTTTCAAGATGTGACACTTTTAGACACAAAGCACTTTGGAAAGGTTTTG GTGATAGATGGAAAAATGCAGAGTGCTGAAAAAGATGAGTTTATATACCATGAAAGCTTG ATTCATCCTGCTCTCTTGCTTCACGACAATCCAAGAAGAGTGTTTATCATGGGGGGAGGA GAAGGGTCAGCTGCGAGAGAGGCTCTTAAACATGACAACATTCTCAAAGTTGTCATCTCT GATATTGATCAAGAAGTTGTGAATATTTGCCGCAAACACCTTGTGGCAAATCAAGAAGCT TTTGCTGATAGTAGGCTTCATGTCATCATCAATGATGCCAAGGTGGAGCTGGAGAAGAGT GATGAGTATAATAAGTATGATGTGATAGTTGGAGACTTATCTGATCCAAAGGAAGGAGGG CCTTGCAATCATCTTTACCTTAAATCTTTTTACCAACATATTATTAAGCCCAAACTTAAT CACAATGGAATCTTTGTCACTCAGGCTGGTTTTGCTGGAGTTCTCTCACATCAAGACTTT TTCTCATCAGTTTACAATACTGCTAAACAAGTCTTCAACCATGTTATAGCTTACACCGCT CATGTTCCATCTTTGGCTGATACACGTGGATGGGTTTTGGCTTCAGATCAACCATTGAAA CTAGATGCTGAGGTAATTAACAACAGGATTAAAGAGAGGATTAAAGGATCAGAGTTGCAA TTTATTGATGCTGCTTTCATGCTTGCTTTTACCATTATGAACAAGACTCTTCATATAACG CTCATGAATGAGACTAATGTTTTAACAGAAGAGAATGACAAGTCCCTCCATGGCAATTGA

Peptide Sequence

PEP ID	Solyc07g041300.2.1
PEP Infomation	Spermidine synthase (AHRD V3.3 *** F8WLB6_CITUN)
Sequence	MEQTIENEIADSNAKNVEWFEESLGVDLKWSLAINSVLYKATTKFQDVTLLDTKHFGKVL VIDGKMQSAEKDEFIYHESLIHPALLLHDNPRRVFIMGGGEGSAAREALKHDNILKVVIS DIDQEVVNICRKHLVANQEAFADSRLHVIINDAKVELEKSDEYNKYDVIVGDLSDPKEGG PCNHLYLKSFYQHIIKPKLNHNGIFVTQAGFAGVLSHQDFFSSVYNTAKQVFNHVIAYTA HVPSLADTRGWVLASDQPLKLDAEVINNRIKERIKGSELQFIDAAFMLAFTIMNKTLHIT LMNETNVLTEENDKSLHGN*

Transcript Sequence

Transcript ID	Solyc07g041300.2.1
Transcript Infomation	Spermidine synthase (AHRD V3.3 *** F8WLB6_CITUN)
Sequence	GAGAATATTGCTTGAAGAAGAAGCAAAACAAAGTTGAAGAAGAAGCAAAAAAGAAAATGT AACTACACACAATTAGTAAATATAAATCCCTAAATTGAGACTATGAAATTATGGAGAGAA GTTTGGGACTCCAAATATTGTGTGAGATAATTACATTTTTGATTGACATATACGTTCAAA ATTAAAGTAAGAAAGTTATCTTGATAACTGTAAAATTCGAAATTAAAGTTCGAAACTTTT TATTTTCTCTCATCTACGAAAATTAAAAAAAGATTTAATAGAATATGTTATCACTCGTAA GCATATATAGAGTAATTTTTTAGGATAATTTCTTAAAACTATTTACCAAATAATAGGTGT ATCTTTTTGTCTTTATCCAAATTCAAAATAAGGTTGGACACATTCAATTTATTCTTTGCT CATGCCCTCAAAATTTATAGTTAAATTATAGACATCAATATTTTTCAAGGATTAATTGAA GTGTGGAATGAATTGAATAAAGTAATTAATTCATAAAGAAAATATTTGACTTGACTTTCA AAATTCAAAAAGGAATTAAATTTTATATAATCTTCCTATTCATTCATTTAAATACAAAGA CAAACTTGAAATACAATACAAACTTTGACATCTATCTCAAAATATATATTAAGTAGAGCT TATAGCATATTGCTCCAAATAATAAAGAGGACTTCCATTTTTATTTTTTTTAATTGAAAA ATGGAGCAAACAATTGAGAATGAAATTGCTGACTCAAATGCAAAGAATGTAGAGTGGTTT GAAGAGTCTCTTGGAGTAGATCTCAAATGGTCTTTAGCCATAAACAGTGTCTTGTACAAA GCAACCACCAAGTTTCAAGATGTGACACTTTTAGACACAAAGCACTTTGGAAAGGTTTTG GTGATAGATGGAAAAATGCAGAGTGCTGAAAAAGATGAGTTTATATACCATGAAAGCTTG ATTCATCCTGCTCTCTTGCTTCACGACAATCCAAGAAGAGTGTTTATCATGGGGGGAGGA GAAGGGTCAGCTGCGAGAGAGGCTCTTAAACATGACAACATTCTCAAAGTTGTCATCTCT GATATTGATCAAGAAGTTGTGAATATTTGCCGCAAACACCTTGTGGCAAATCAAGAAGCT TTTGCTGATAGTAGGCTTCATGTCATCATCAATGATGCCAAGGTGGAGCTGGAGAAGAGT GATGAGTATAATAAGTATGATGTGATAGTTGGAGACTTATCTGATCCAAAGGAAGGAGGG CCTTGCAATCATCTTTACCTTAAATCTTTTTACCAACATATTATTAAGCCCAAACTTAAT CACAATGGAATCTTTGTCACTCAGGCTGGTTTTGCTGGAGTTCTCTCACATCAAGACTTT TTCTCATCAGTTTACAATACTGCTAAACAAGTCTTCAACCATGTTATAGCTTACACCGCT CATGTTCCATCTTTGGCTGATACACGTGGATGGGTTTTGGCTTCAGATCAACCATTGAAA CTAGATGCTGAGGTAATTAACAACAGGATTAAAGAGAGGATTAAAGGATCAGAGTTGCAA TTTATTGATGCTGCTTTCATGCTTGCTTTTACCATTATGAACAAGACTCTTCATATAACG CTCATGAATGAGACTAATGTTTTAACAGAAGAGAATGACAAGTCCCTCCATGGCAATTGA TTGCTTGCTGCTGACATCTACCAATAAAGTCTAAAAATTTAGTTAGTTTCTATGAACTCT CTCTCTCTATATATATATATTATGCGCTAACAGATGATAAATTTT