Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g041190.3.1
CDS Infomation	PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR)
Sequence	ATGGAAGGAGGTGCACAGTACAATCCTCGCACCGTGGAAGAAGTTTTTAAGGATTTTACC GGCCGTCGAACCGGCATGATCAAAGCCCTCACCACTGATGTGGAGGATTTTTATCATCAA TGTGACCCTGAAAAGGAAAATCTCTGCCTCTATGGATATCCAAGTGAGCAGTGGGAAGTC AATTTGCCAGCTGAGGAGGTGCCTCCAGAGCTTCCAGAGCCAGCACTAGGTATAAACTTC GCTAGAGATGGGATGCAAGAAAAGGAATGGTTAGCTCTAGTTGCTGTACATAGTGATGCA TGGCTACTCTCTGTTTCCTTCTATTTTGGTGCCAGATTCGGCTTTGATAGAGCTGACAGG AAACGTCTTTTCAACATGATGAATGATCTGCCAACAATATATGAAGTTGTTACTGGAGTG GCCAAGAAGAGAGTAAAGGATAAATCAACAGTTTCAAATCACAGCAGCAACAAGTCAAAA TCAAATTCTAAAGCGGGTAAATACTCAAAGCCTCAAGTAAAAGATGAGGATGATGGATTT GATGAGGAAGAAGAAGATGAACATGGCGACACTCTGTGTGGTGCATGTGGTGAGAACTAT GCTTCAGATGAATTCTGGATTTTCTGTGACATGTGCGAGAGGTGGTTCCATGGAAACTGT GTGAAGATCACCCCTGCCAAGGCCGAGCATATAAAGCAGTACAAATGCCCTTCATGCAGC AACAAGAGGATACGCCCATGA

Peptide Sequence

PEP ID	Solyc07g041190.3.1
PEP Infomation	PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR)
Sequence	MEGGAQYNPRTVEEVFKDFTGRRTGMIKALTTDVEDFYHQCDPEKENLCLYGYPSEQWEV NLPAEEVPPELPEPALGINFARDGMQEKEWLALVAVHSDAWLLSVSFYFGARFGFDRADR KRLFNMMNDLPTIYEVVTGVAKKRVKDKSTVSNHSSNKSKSNSKAGKYSKPQVKDEDDGF DEEEEDEHGDTLCGACGENYASDEFWIFCDMCERWFHGNCVKITPAKAEHIKQYKCPSCS NKRIRP*

Transcript Sequence

Transcript ID	Solyc07g041190.3.1
Transcript Infomation	PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR)
Sequence	CTCAAAAAGTTGTTTCAAATTACCAGAAAAATTGTTTAGAGTGATCCATTGTTAAGATGG AAGGAGGTGCACAGTACAATCCTCGCACCGTGGAAGAAGTTTTTAAGGATTTTACCGGCC GTCGAACCGGCATGATCAAAGCCCTCACCACTGATGTGGAGGATTTTTATCATCAATGTG ACCCTGAAAAGGAAAATCTCTGCCTCTATGGATATCCAAGTGAGCAGTGGGAAGTCAATT TGCCAGCTGAGGAGGTGCCTCCAGAGCTTCCAGAGCCAGCACTAGGTATAAACTTCGCTA GAGATGGGATGCAAGAAAAGGAATGGTTAGCTCTAGTTGCTGTACATAGTGATGCATGGC TACTCTCTGTTTCCTTCTATTTTGGTGCCAGATTCGGCTTTGATAGAGCTGACAGGAAAC GTCTTTTCAACATGATGAATGATCTGCCAACAATATATGAAGTTGTTACTGGAGTGGCCA AGAAGAGAGTAAAGGATAAATCAACAGTTTCAAATCACAGCAGCAACAAGTCAAAATCAA ATTCTAAAGCGGGTAAATACTCAAAGCCTCAAGTAAAAGATGAGGATGATGGATTTGATG AGGAAGAAGAAGATGAACATGGCGACACTCTGTGTGGTGCATGTGGTGAGAACTATGCTT CAGATGAATTCTGGATTTTCTGTGACATGTGCGAGAGGTGGTTCCATGGAAACTGTGTGA AGATCACCCCTGCCAAGGCCGAGCATATAAAGCAGTACAAATGCCCTTCATGCAGCAACA AGAGGATACGCCCATGACATCCCCTATCAGATATGTGCTGAGTTCCACAACTTGTAATTG TTCATGTTGAGCTCAGCTCACTGCCATCTTACAAATATCAGTAAGGCATGTGTAGTCAGA GTCCTAGTCTCTTATGTTTATCAGGGTGCTTAACTAGTTTAGTTCCCTCAAGACACCCTT TTATTCAACTCTAAACAATTGGATATTAGATGCATAAACTTTCAGTATCAAATGCTAACT AAACGCAGTTCGTCTGAAGCATATGTTGCAGCTGTAGTTTTTGGGTGCTCCTTGTTTGAT CATAAAACGTGTTCTCAATGATTTCAAACGCTAGTATATGATGTGATTTGGAAGGAACTG CTGAGCATTTATTTGCCTCATCGTGGTTACAGCTTGCGAGCTAGTTGAGTGGTTAGAGAT TAGTCAGAATAAAACATGTCAATGAAGATTGAATTATGTACTTGATGGGCGATGTAAGAT ATAATCGTGCTGGTCTTGCAGTAGCTTCATTTGCTGTAACGATACCCGTACTGCTGTATC TGCAAGCTGCTCTCCCCATGGTTCAATGTGAAATCCTTTATTGCCATGGTCGAATCTCCT ATATCTTCTATCTTCACAAAATATCCATTAAAGAAGTTACTTATTATGATACCGTAATCT ATTACTTCCATTTTTCCTTTCAACTATGCCTTTTCTCTGAGACATACATCACTGGATCTC AATTTTCAAGGTAGGGGTCATTGCCAAATACATTAGAATTTGTTATTGGTCTTTTTCTAG TTGTGTCCTGTATTCAACATTGGTAAGCCTAATAATTTAGCTTACATTGTGATATGAAAT CATGATTTCTTCAAGAAAAAGTAAGTACTATAAATGATGTTCTACGTACAATGCTACCTC AATCTAATCTTTTCATTAGGGAAAATAACATTTGGATTTCTGATGTGTGGATTTAATGCA GCTAATTCCTCCCATTTAGCCCCTGTACCATGCACCCGTGATGATATACTCCATAACGTC TCACCAGGCTGCACTGTTGTAGTTGCTAGAGAAGAAGCAGCTGCTATTGATGATTTATTT ATACCCTTTGACTTCATTAATGGATGCTTATTCTTCTTTCCCATTCCATTCGCCAGCAAC CAACGCGATCCTGATTGCTGTTGACTTGACGAACCCCATAATTTCTTTTTACCTTGTTCT GTCTTTAAACCTGCAACATGTACTCCAGTGATTTTGTATTGAGGGATTTCTTCATCCTCA CGAATCTGTTCTTCTTTCACATCCACACCACCAGCTTCCTTTTGGGGGGACTTGAGTTCA TTATCATCATCATCTTCATTGCTCTTTCTAACTTGAGAAACTGTGCTGTATATCTTAGCT TTAGGTGTTACAAACACTCTCTCCACTTGAACAAGAGCAAGCATAGGTGTACCAACTGGC TCATAATTCCTTAAAGGATCACGAAGTTGCACCATTAGGGCCACTGTAAAGCTGTTTCCC AACAACCCGCAGTTCTTACCCTTGCCACGTTTCTTCGACCTACCACGAAACAAATCAGTG CAGGTACCATGATGAGCTGCAAGCAGTTTGGACGTCCGCTCGCTGATTTCATCAATTTCT CCGGCGTCCAACTTCATCCATTCATCAAGAGTGAGAGATAAGCCCATTAGTCCATCAACC TCACCACCACCATCATTGTCTTTAACGTCCAGTAACTGCAATCCACCAGTTCCTTCTAGA CCTACAGCTCCTCCAAAGTTGACCTTCTTTCCCTCGATGGCTGAAAACTCACCAATGGGT TTTGAGCTTACATTAGAAGGTGTGTCCTCATCTGACATGCCTGACTGTATTCTCAAACCT TCAATTGAAAGGGCTTCAATTTTATCCATCGCCAAAGGAGCAAGGTCCTCTAGTGATACG TATTCTGAGTCCTTGTCAAGCCCGGCAGAATTTGACTCCAACTTGCTGCTGGACTTTGGT CTGTGCAATTTCCCCTTATTACTT