Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g040990.3.1
CDS Infomation

Protein phosphatase 2C family protein (AHRD V3.3 *** AT5G57050.1)
Sequence

ATGGAAGAGATGTTTCCAACACTTGCTGTATCATATAAACAGGGAAAATTGATATATGAT
GAATCAGTATTACCTACATGTATTGACTTTGCTGGATATGAGCTGATCCCCAATACAACT
AGCTTGCTGTCAGAACCTAACAAGTGCAAACTTCCTTGTTCGGTGTCGAATCATAGAGTG
TCCAGGGACAAAGCTAACCTTTTTATGACAGTTGCTGATTGTCATGAAATCAGGATAGGG
AAGAGTTTTTCTTCGACAGTTGTAGGTAATGGGAATTGTTTGATTGCTAGTGAGGTAGAA
GATGGTAGATCTATGGACAACAATTTGATTTCACCAACTGATGAGCTTTTAGGAAATATG
ACTTGTTCTGATTCTCTAGTTGATGAGCGTGTCAGCATGCCTAACCAAGAATGTACAGGT
TTGGAGGTTAAGGTTGGGAAAATGCCTCCTCGGGATGAGGAAAAGAAGGTTGGTGTATCC
CAGATTCTGAGAAAGTCTTTTTCGTGTAGTTTGGCTAATGAGTTGGTTAATGAGTCACAA
CTTGTAAGTGATATTGTTTCCACCATGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTA
TCACCATCCCATCTTGAGACCTCACAAGAGATAAAGATAAGCAGGCCAAATACCCTTTGT
TTTGATTCTGTACCGCTTTGGGGGCTCATCACAATACAAGGAAAGAGGCCGGAGATGGAA
GATACTGCTATAGCTTTACCAAAGTTTCTGAAAATCCCTTCCCATATTTTGACTGATGCG
CCAGTTTCTCATGCCCTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGA
CATGGAGGCTCTCAGGTAGCTAATTATTGTCATGAGCGTCTCCATATGGTTTTAGCACAG
GAGATAGATATCATGAAAGAGGATCCACATAATGGAAGTGTTAACTGGAAGGAGCAATGG
TCAAAGGCTTTCTTGAATTGTTTCTGTAGAGTCGATGATGAGGTAGGGGGGTTCTGTAGT
GAAACAGACGGGATTGAGCCTGACCTTTCAGTCATTGCTCCTGAAGCAGTTGGATCTACA
GCTATAGTTGCTGTTGTTAGTCCAAGCCATATTATTGTTGCGAATTGTGGTGATTCTAGG
GCAGTCCTTTGTCGGGGAAAACTGCCCATGCCATTAACCATTGACCATAAGCCAAATAGG
GAAGATGAGTGTTCACGAATAGAAGAACTGGGAGGGAAGGTCATTAATTGGGATGGACAT
CGCGTTTCTGGTGTTCTTGCAGTTTCAAGGTCAATTGGTGATCGATATTTAAGGCCTTAT
GTGATTCCAGATCCAGAAATGATGTTTGTACCCCGAGCAAAAGAAGACGACTGTCTAATT
TTAGCAAGTGATGGGCTATGGGATGTCTTGACAAATGAAGAAGCTTGTGATGTAGCACGG
AGACGAATTCTTCTCTGGCACAAAAAAAATGGTGGTACTTTGAGTAGGGAAAGGGGTGAA
AACGTAGATCCTGCTGCTCAAGATGCTGCAGAGTACTTGACTCGAGTTGCTCTCCAAAGG
GGCAGCAGAGATAATATATCTGTGATTGTGGTCGATTTGAAGGCACAGAGGAAATTCAAG
AAGAAAACATAA

Peptide Sequence

PEP ID

Solyc07g040990.3.1
PEP Infomation

Protein phosphatase 2C family protein (AHRD V3.3 *** AT5G57050.1)
Sequence

MEEMFPTLAVSYKQGKLIYDESVLPTCIDFAGYELIPNTTSLLSEPNKCKLPCSVSNHRV
SRDKANLFMTVADCHEIRIGKSFSSTVVGNGNCLIASEVEDGRSMDNNLISPTDELLGNM
TCSDSLVDERVSMPNQECTGLEVKVGKMPPRDEEKKVGVSQILRKSFSCSLANELVNESQ
LVSDIVSTMVVGAEDYKRKLSPSHLETSQEIKISRPNTLCFDSVPLWGLITIQGKRPEME
DTAIALPKFLKIPSHILTDAPVSHALSQTLTAHLYGVYDGHGGSQVANYCHERLHMVLAQ
EIDIMKEDPHNGSVNWKEQWSKAFLNCFCRVDDEVGGFCSETDGIEPDLSVIAPEAVGST
AIVAVVSPSHIIVANCGDSRAVLCRGKLPMPLTIDHKPNREDECSRIEELGGKVINWDGH
RVSGVLAVSRSIGDRYLRPYVIPDPEMMFVPRAKEDDCLILASDGLWDVLTNEEACDVAR
RRILLWHKKNGGTLSRERGENVDPAAQDAAEYLTRVALQRGSRDNISVIVVDLKAQRKFK
KKT*

Transcript Sequence

Transcript ID

Solyc07g040990.3.1
Transcript Infomation

Protein phosphatase 2C family protein (AHRD V3.3 *** AT5G57050.1)
Sequence

TTTTTAATGAGAGGAACTGAAGTTCCTTTTTTTTTTTTTCTTTTTCCTTCTTTCTTTTTT
ATTATTTAGTGTGTCATTAATGCAAGATTGTTTTGAAACGGTAACCAAGAAGAAGTTGGG
TTGCTTTGAATTTGGAAAAAAGTTTCATGTATGGTCTGCTTTGTGCTTGTAAGTCCTTTT
TTTTTTCCATAAAGATTGAATCTTTATATGTTGTGTCTCTGTCTTGTTAAGCAGTGACCA
CTAGATTTGTTGTTTCCTATATATTATAAGTTGATGAAAAGTGATTCTCTGTTTAGGGGG
TTTGTTGGTAATGTGTTGTTGAATGGATAGAATTGGAATAGAAGAGTACAAGATGCTGAA
TAGGGTTATATGGATAGTGATTCCACAAGTTTGGACTTTGGATCCATATTCTCTTATGTC
ATAGATTTATTCTGTTTTTTGTTTTTGTCAAACCTTTTGTTGGCTTAAAAATTAAGTAAA
TTTTAGGGATTTGAATAATTTTGGTTGGTTAGAAGAAAGGTACTGATGGAAGAGATGTTT
CCAACACTTGCTGTATCATATAAACAGGGAAAATTGATATATGATGAATCAGTATTACCT
ACATGTATTGACTTTGCTGGATATGAGCTGATCCCCAATACAACTAGCTTGCTGTCAGAA
CCTAACAAGTGCAAACTTCCTTGTTCGGTGTCGAATCATAGAGTGTCCAGGGACAAAGCT
AACCTTTTTATGACAGTTGCTGATTGTCATGAAATCAGGATAGGGAAGAGTTTTTCTTCG
ACAGTTGTAGGTAATGGGAATTGTTTGATTGCTAGTGAGGTAGAAGATGGTAGATCTATG
GACAACAATTTGATTTCACCAACTGATGAGCTTTTAGGAAATATGACTTGTTCTGATTCT
CTAGTTGATGAGCGTGTCAGCATGCCTAACCAAGAATGTACAGGTTTGGAGGTTAAGGTT
GGGAAAATGCCTCCTCGGGATGAGGAAAAGAAGGTTGGTGTATCCCAGATTCTGAGAAAG
TCTTTTTCGTGTAGTTTGGCTAATGAGTTGGTTAATGAGTCACAACTTGTAAGTGATATT
GTTTCCACCATGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTATCACCATCCCATCTT
GAGACCTCACAAGAGATAAAGATAAGCAGGCCAAATACCCTTTGTTTTGATTCTGTACCG
CTTTGGGGGCTCATCACAATACAAGGAAAGAGGCCGGAGATGGAAGATACTGCTATAGCT
TTACCAAAGTTTCTGAAAATCCCTTCCCATATTTTGACTGATGCGCCAGTTTCTCATGCC
CTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGACATGGAGGCTCTCAG
GTAGCTAATTATTGTCATGAGCGTCTCCATATGGTTTTAGCACAGGAGATAGATATCATG
AAAGAGGATCCACATAATGGAAGTGTTAACTGGAAGGAGCAATGGTCAAAGGCTTTCTTG
AATTGTTTCTGTAGAGTCGATGATGAGGTAGGGGGGTTCTGTAGTGAAACAGACGGGATT
GAGCCTGACCTTTCAGTCATTGCTCCTGAAGCAGTTGGATCTACAGCTATAGTTGCTGTT
GTTAGTCCAAGCCATATTATTGTTGCGAATTGTGGTGATTCTAGGGCAGTCCTTTGTCGG
GGAAAACTGCCCATGCCATTAACCATTGACCATAAGCCAAATAGGGAAGATGAGTGTTCA
CGAATAGAAGAACTGGGAGGGAAGGTCATTAATTGGGATGGACATCGCGTTTCTGGTGTT
CTTGCAGTTTCAAGGTCAATTGGTGATCGATATTTAAGGCCTTATGTGATTCCAGATCCA
GAAATGATGTTTGTACCCCGAGCAAAAGAAGACGACTGTCTAATTTTAGCAAGTGATGGG
CTATGGGATGTCTTGACAAATGAAGAAGCTTGTGATGTAGCACGGAGACGAATTCTTCTC
TGGCACAAAAAAAATGGTGGTACTTTGAGTAGGGAAAGGGGTGAAAACGTAGATCCTGCT
GCTCAAGATGCTGCAGAGTACTTGACTCGAGTTGCTCTCCAAAGGGGCAGCAGAGATAAT
ATATCTGTGATTGTGGTCGATTTGAAGGCACAGAGGAAATTCAAGAAGAAAACATAA