Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g040960.1.1
CDS Infomation

LOW QUALITY:Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A103Y2W0_CYNCS)
Sequence

ATGGAAATTTCTTCTTTCCTATTTCCCAATCAGGAAGATTATCCTTCTCCTAATTTCTTC
AGTTTTTTTCAAGATTTTGACTTCCCTACTACTGATACTCTTGCTCCGATAGTTGCTGAA
CCGCTTCCTAAAAAGCAAAGAGTTGATGATTTTGATTTTGATTTGGAACAAGTTGTTGAA
CAGCAGGGCTCTTTGAAGAGTGTTGAGGATATATTAAACAAATTTTTGGGATTTGATAAG
GAAGAAGACAAAACGAACCTTAAGCAATTCACAAATCAAAATCAATCTGTTTTTGACTTT
TCGAATCAACAACCTACCGGGTTAATAATGATAAATGAGAAAGTGAAGCCAATGGCGAGT
ACGAATAACAAAAGGTCTCGTCAGGGTTCTGCTGAATTCATTTCAACTTCGGAGGAGGAA
TCTCAGCCTCAACAGCAAAGGAGGTTATGGGTGAAAGACAGGTCTAAAGCATGGTGGGAA
CAGTGTAATAGCCCTGATTTTCCAGAAGAGGAGTTTAAAAAGGCGTTTAGGGTGAGCAGA
GCAACTTTTGATATGATCTGTGAAGAATTGGAATCTGTAGTCACTAAAAAGGACACAATG
CTTCGTCAAGCAATTCCAGTTCGCCAACGTGTTGCTGTCTGCATTTGGAGATTGGCTACA
GGAGAGCCACTTCGTGAAGTTTCCAAGCGTTTTGGCCTAGGCATATCTACATGTCATAAG
CTTGTTCTAGAGGTTTGCACTGCAATTAAAGGCGTACTCATGCCAAAATTCGTGCAATGG
CCTAATGAGGATTACAAGATGAACGAGATCAAAAGTGAATTCCAGATGTTATCCGGGATG
CCAAATGTAGGTGGATCTATTTACACAACACATGTTCCAATAATCGCCCCAAAAGTAAGT
GTAGCTGCTTATTTCAACAAAAGGCATACAGAAAGGAATCAGAAAACTTCATACTCCGTT
ACAGTTCAAGGTGTTGTGGATCCAAAAGGGGTTTTCACAGATGTTTGCATCGGTTGGCCT
GGTTCGATGTCTGATGACAAAGTATTGGAAAAATCAGCTCTGTATCAGAGAGCAAACAGG
GGACAGTTGAAGGATACTTGGGTTGTAGGAAATTCAGGGTATCCATTAATGGATTGGGTA
TTAGCTCCTTACACACGCCAAAATCTTACTTGGACTCAACATGCTTTTAATGAAAAAGTA
GGGGAAGTCCAAAAGGTTGCTAAAGAGGCGTTTATGCGAATGAAAGCTAGGTGGAGCTGC
TTACGCAAGAGAACAGAAGTGAAGCTTCAAGATTTGCCTGTGGTATTGGGGGCTTGCTGT
GTATTGCATAATATTTGCGAGATGAGAGGTGAACAACTGAATCCAGGGCTGAGATTTGAT
CTTTTCGATGATGAAATGGTTCCAGAAAATATTGTGAGGTCAATGAATGCTGTACAAGCT
AGGGATCAGATTGCTCACCAACTCTTGCATCAAAATCATGCAGGCACTAATTTCCTTTAA

Peptide Sequence

PEP ID

Solyc07g040960.1.1
PEP Infomation

LOW QUALITY:Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A103Y2W0_CYNCS)
Sequence

MEISSFLFPNQEDYPSPNFFSFFQDFDFPTTDTLAPIVAEPLPKKQRVDDFDFDLEQVVE
QQGSLKSVEDILNKFLGFDKEEDKTNLKQFTNQNQSVFDFSNQQPTGLIMINEKVKPMAS
TNNKRSRQGSAEFISTSEEESQPQQQRRLWVKDRSKAWWEQCNSPDFPEEEFKKAFRVSR
ATFDMICEELESVVTKKDTMLRQAIPVRQRVAVCIWRLATGEPLREVSKRFGLGISTCHK
LVLEVCTAIKGVLMPKFVQWPNEDYKMNEIKSEFQMLSGMPNVGGSIYTTHVPIIAPKVS
VAAYFNKRHTERNQKTSYSVTVQGVVDPKGVFTDVCIGWPGSMSDDKVLEKSALYQRANR
GQLKDTWVVGNSGYPLMDWVLAPYTRQNLTWTQHAFNEKVGEVQKVAKEAFMRMKARWSC
LRKRTEVKLQDLPVVLGACCVLHNICEMRGEQLNPGLRFDLFDDEMVPENIVRSMNAVQA
RDQIAHQLLHQNHAGTNFL*

Transcript Sequence

Transcript ID

Solyc07g040960.1.1
Transcript Infomation

LOW QUALITY:Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A103Y2W0_CYNCS)
Sequence

ATGGAAATTTCTTCTTTCCTATTTCCCAATCAGGAAGATTATCCTTCTCCTAATTTCTTC
AGTTTTTTTCAAGATTTTGACTTCCCTACTACTGATACTCTTGCTCCGATAGTTGCTGAA
CCGCTTCCTAAAAAGCAAAGAGTTGATGATTTTGATTTTGATTTGGAACAAGTTGTTGAA
CAGCAGGGCTCTTTGAAGAGTGTTGAGGATATATTAAACAAATTTTTGGGATTTGATAAG
GAAGAAGACAAAACGAACCTTAAGCAATTCACAAATCAAAATCAATCTGTTTTTGACTTT
TCGAATCAACAACCTACCGGGTTAATAATGATAAATGAGAAAGTGAAGCCAATGGCGAGT
ACGAATAACAAAAGGTCTCGTCAGGGTTCTGCTGAATTCATTTCAACTTCGGAGGAGGAA
TCTCAGCCTCAACAGCAAAGGAGGTTATGGGTGAAAGACAGGTCTAAAGCATGGTGGGAA
CAGTGTAATAGCCCTGATTTTCCAGAAGAGGAGTTTAAAAAGGCGTTTAGGGTGAGCAGA
GCAACTTTTGATATGATCTGTGAAGAATTGGAATCTGTAGTCACTAAAAAGGACACAATG
CTTCGTCAAGCAATTCCAGTTCGCCAACGTGTTGCTGTCTGCATTTGGAGATTGGCTACA
GGAGAGCCACTTCGTGAAGTTTCCAAGCGTTTTGGCCTAGGCATATCTACATGTCATAAG
CTTGTTCTAGAGGTTTGCACTGCAATTAAAGGCGTACTCATGCCAAAATTCGTGCAATGG
CCTAATGAGGATTACAAGATGAACGAGATCAAAAGTGAATTCCAGATGTTATCCGGGATG
CCAAATGTAGGTGGATCTATTTACACAACACATGTTCCAATAATCGCCCCAAAAGTAAGT
GTAGCTGCTTATTTCAACAAAAGGCATACAGAAAGGAATCAGAAAACTTCATACTCCGTT
ACAGTTCAAGGTGTTGTGGATCCAAAAGGGGTTTTCACAGATGTTTGCATCGGTTGGCCT
GGTTCGATGTCTGATGACAAAGTATTGGAAAAATCAGCTCTGTATCAGAGAGCAAACAGG
GGACAGTTGAAGGATACTTGGGTTGTAGGAAATTCAGGGTATCCATTAATGGATTGGGTA
TTAGCTCCTTACACACGCCAAAATCTTACTTGGACTCAACATGCTTTTAATGAAAAAGTA
GGGGAAGTCCAAAAGGTTGCTAAAGAGGCGTTTATGCGAATGAAAGCTAGGTGGAGCTGC
TTACGCAAGAGAACAGAAGTGAAGCTTCAAGATTTGCCTGTGGTATTGGGGGCTTGCTGT
GTATTGCATAATATTTGCGAGATGAGAGGTGAACAACTGAATCCAGGGCTGAGATTTGAT
CTTTTCGATGATGAAATGGTTCCAGAAAATATTGTGAGGTCAATGAATGCTGTACAAGCT
AGGGATCAGATTGCTCACCAACTCTTGCATCAAAATCATGCAGGCACTAATTTCCTTTAA