Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g040720.3.1
CDS Infomation

Casein kinase family protein (AHRD V3.3 *** B9N5F1_POPTR)
Sequence

ATGGAGCCTCGTGTGGGTAACAAGTTTCGACTTGGTCGCAAAATTGGTAGTGGATCGTTT
GGTGAGATCTATCTTGGTACTAATATTCAGACTAATGAAGAAGTGGCAATTAAGCTGGAA
AATAATAAGACAAAGCATCCACAGTTGCTATATGAATCAAAGTTGTATAGGATTCTTCAG
GGAGGAACTGGAATTCCAAACGTGAGGTGGTTTGGCGTGGAGGGAGATTACAATGTTCTG
GTCATGGATTTACTAGGACCCAGTCTTGAAGATCTATTTAATTTTTGCAGCAGGAAGCTT
TCCCTGAAGACAGTTTTAATGCTTGCTGATCAAATGATAAATCGTGTTGAATTTGTTCAT
TCTAAATCATTTTTGCATCGAGATATCAAGCCAGACAATTTTCTTATGGGCTTGGGAAGG
CGTGCAAATCAGGTGTATGCAATTGACTTCGGTCTAGCCAAGAAGTATCGAGATACTTCA
TCTCACCAACACATTCCTTACCGTGAGAACAAAAACTTGACGGGCACTGCAAGATATGCA
AGCATGAACACTCACCTCGGTATCGAGCAAAGCAGGAGGGATGATTTGGAGTCTCTTGGA
TTTGTTCTTATGTACTTCCTCCGAGGAAGTCTTCCTTGGCAAGGGCTGAAAGCAGGAAAT
AAGAAGCAGAAGTATGAGAAAATTAGTGAAAAGAAGGTTTCAACATCTATCGAGGCTTTA
TGTCGAGGTTATCCTACTGAATTTGCTTCATATTTCCATTACTGCCGTTCTCTGCGCTTC
GAGGATAAACCAGATTATGCTTATCTGAAGAGAATATTTCGTGACCTCTTTATCCGCGAA
GGTTTTCAGTTTGATTATGTTTTTGATTGGACTATATTAAAGTATCAGCAATCGCAAATT
GCAGCTCCTCCTTCCCGACCTCTTGGTGCTGGTGCTGGAACCAGCTCAGGCATGCCTCCA
GTTATTCCCAAGGCAGAAAGACAGGCAGGTGAAGATGAAGGAAGACAATCAGCAGATCCC
TCTCGGAGGAGAAGTCCTGTGCCACCACTGATTACTTCTGGAAGTTTATCCAGGCAGAAA
AGTCCTATTGGAAATGATTCCACGAGCAAAGAGGCTATGTTGTCAAGCTCCAGTTTTCTG
GGAAGACCTAGTGGGTCTCTGAGGCAAGGTCTAGTCTCTGGCAGCCGTGAGACTTTCACC
ATGGGAAATGACTCTGACCCTACACATTCTCGCACGCCTGAGGCAAGTCCAGCAACTATG
CACAAAATATCAGGTGGACATAGAAGCTCTCTACTTGGTGGATCATCTGATCCTAGGTAT
GCCTCATCTAGCAAGAATACTTCTGGGATAAAGAACTATGAATCGGCGCTCAAAGGAATT
GAGACTCTACATTTTGATGATGAAGAGAGGGCTCATTGA

Peptide Sequence

PEP ID

Solyc07g040720.3.1
PEP Infomation

Casein kinase family protein (AHRD V3.3 *** B9N5F1_POPTR)
Sequence

MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENNKTKHPQLLYESKLYRILQ
GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH
SKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSSHQHIPYRENKNLTGTARYA
SMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIEAL
CRGYPTEFASYFHYCRSLRFEDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQI
AAPPSRPLGAGAGTSSGMPPVIPKAERQAGEDEGRQSADPSRRRSPVPPLITSGSLSRQK
SPIGNDSTSKEAMLSSSSFLGRPSGSLRQGLVSGSRETFTMGNDSDPTHSRTPEASPATM
HKISGGHRSSLLGGSSDPRYASSSKNTSGIKNYESALKGIETLHFDDEERAH*

Transcript Sequence

Transcript ID

Solyc07g040720.3.1
Transcript Infomation

Casein kinase family protein (AHRD V3.3 *** B9N5F1_POPTR)
Sequence

AATCTCTGCTTTAAACCTAACCCTAGCTTTGTACTGTAGATAGAGAAAAGGGATTTTTTT
TTTCATATTTTCGCAGGCGGAAGAAAACCCTTCAGATCGATGATCTCAGTATAGAAATCA
CAGTTGTAATCTTTTCTTCTTTGGTTTTGCAAAAACCTTTCGTTAGGGTTTTCGTTCATT
TGTAATGGAGCCTCGTGTGGGTAACAAGTTTCGACTTGGTCGCAAAATTGGTAGTGGATC
GTTTGGTGAGATCTATCTTGGTACTAATATTCAGACTAATGAAGAAGTGGCAATTAAGCT
GGAAAATAATAAGACAAAGCATCCACAGTTGCTATATGAATCAAAGTTGTATAGGATTCT
TCAGGGAGGAACTGGAATTCCAAACGTGAGGTGGTTTGGCGTGGAGGGAGATTACAATGT
TCTGGTCATGGATTTACTAGGACCCAGTCTTGAAGATCTATTTAATTTTTGCAGCAGGAA
GCTTTCCCTGAAGACAGTTTTAATGCTTGCTGATCAAATGATAAATCGTGTTGAATTTGT
TCATTCTAAATCATTTTTGCATCGAGATATCAAGCCAGACAATTTTCTTATGGGCTTGGG
AAGGCGTGCAAATCAGGTGTATGCAATTGACTTCGGTCTAGCCAAGAAGTATCGAGATAC
TTCATCTCACCAACACATTCCTTACCGTGAGAACAAAAACTTGACGGGCACTGCAAGATA
TGCAAGCATGAACACTCACCTCGGTATCGAGCAAAGCAGGAGGGATGATTTGGAGTCTCT
TGGATTTGTTCTTATGTACTTCCTCCGAGGAAGTCTTCCTTGGCAAGGGCTGAAAGCAGG
AAATAAGAAGCAGAAGTATGAGAAAATTAGTGAAAAGAAGGTTTCAACATCTATCGAGGC
TTTATGTCGAGGTTATCCTACTGAATTTGCTTCATATTTCCATTACTGCCGTTCTCTGCG
CTTCGAGGATAAACCAGATTATGCTTATCTGAAGAGAATATTTCGTGACCTCTTTATCCG
CGAAGGTTTTCAGTTTGATTATGTTTTTGATTGGACTATATTAAAGTATCAGCAATCGCA
AATTGCAGCTCCTCCTTCCCGACCTCTTGGTGCTGGTGCTGGAACCAGCTCAGGCATGCC
TCCAGTTATTCCCAAGGCAGAAAGACAGGCAGGTGAAGATGAAGGAAGACAATCAGCAGA
TCCCTCTCGGAGGAGAAGTCCTGTGCCACCACTGATTACTTCTGGAAGTTTATCCAGGCA
GAAAAGTCCTATTGGAAATGATTCCACGAGCAAAGAGGCTATGTTGTCAAGCTCCAGTTT
TCTGGGAAGACCTAGTGGGTCTCTGAGGCAAGGTCTAGTCTCTGGCAGCCGTGAGACTTT
CACCATGGGAAATGACTCTGACCCTACACATTCTCGCACGCCTGAGGCAAGTCCAGCAAC
TATGCACAAAATATCAGGTGGACATAGAAGCTCTCTACTTGGTGGATCATCTGATCCTAG
GTATGCCTCATCTAGCAAGAATACTTCTGGGATAAAGAACTATGAATCGGCGCTCAAAGG
AATTGAGACTCTACATTTTGATGATGAAGAGAGGGCTCATTGATTGCAAATCCTTTCACA
TGTAAATTTTTACTTGTTTGGTAGACTTCAGATATAGATTGAGGCCCTGAAAGCTTATTT
TTGTTTGAATTCGTGGGTTGGAAACTAGTGAATGAGCAGTTGTTATTCACTCTGCCAAAA
GATCTACAGCAAATAAAAAAATCCAGATGGTGCAAATGCAGGAGGTGTGAGGTTCTGTCA
ATACTAACTCCAACATGGTGCATGACTCTCTATAGATGTAGGCAATGCATGCAGCATTGT
CTATAATCATTTAGTTCTGTCCAACTCTAGGGGATCAGTTAAACTGTATATTAAATTTCC
CCATACTTTTAATACTTTTCAGGTTAGTAGATGTGGTTCATTTAAATACAGTTCTCAAAT
ATTAGTGTTCTGGTAATTCATGTGTAGCTTGTTGTGCAAGGATCATGCTGTGCTCATTTC
TCTCTAGTATATCAATCGTAACAGAATAGGAGGTGTTAGAAAGGATGGTCATATTTTGTA
CTTTTGGCAGCAATTTTTAATCGTTTGTTTTCTGTTTCTTGCATTGCATAGTTGTGTAGT
GAAAGTACAATATAGAGAGGTATGTAGGTACCTTCACTTGGTAACTTATTTGCTATCACA
ACCTTGAGAAGTGTTGAAGATAAATATGAAATACAACTGTGAGTTATACTCGTTAGATTT
CTACTTTACAAGTATTTTTTTTTTCTACTAAGTGAGGATCTGAATGGCCCATATTCTCCC
GATTTTCTTGTTATGCTTTGTTTATAACAAACAAGTTTGCAGAAGTTTGACATGGATGCC
TTTGCTGATGTGTGATCCTTGTCGTAACTTGTTTGTGTTGTACATTTCGTATTGTTGGCG
TGCATGGCCCATGAAATCAAACTAATTATTTTGATGATAAAACACATTTCTGTTCCCTCT
TTGCCTTGTCTATTAAACTCTTCATTTCTGGTTCGTTGCTCCTATTCTTGTGTCTTCTCT
TTAACCCCAACACTGTAAGGTCACTCTTCTCCTCCTTTGGGTGTTTGTCCACATACAAGT
CTTCCGGAGCGAATTCCGATTTGTTCGGTGTCCTTGCGTGAACATTGGACACGAGATCAT
TTTCTTTTGAGGTCTAACTTATGAGTAGGTATGTCTGTTAATACAACATTAACGCATACC
CATCAGCCCAACTCAAAGAAGATACAACCTAAAAAAGTAATAACTACTTTTAGATCCCTT
TATTTTTT