Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g039500.3.1
CDS Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9QS67_9ROSA)
Sequence	ATGGCCGCTATGGCGTCTACGCCGTTATCATTTGATTACATTTCTTCGAAGCAGCTTCAA TTTTCAATACCCATACCCAAAATTCAAGATTGGCACAGCTGTAGAGCTAAAAATGTAGTT AGAGTTTATTGTTCTTCTCCCCAAACAATCCATTCGAACAGAGAAAAGCAAATCAATGAG ATAAAGAAGCAGAGGAAACCCAGACCAAGCTTTGTTAAACAAGTTCAAGATAAATGGTCT GTAAAACCCACTTCATTGAGGGAGAAATTCCCTTGGCAAGAAGGGAATTCAGTATCAGTA GAAGAAGTTGTAGAAGCACAAGTGCAGATTTCTAAGTTGGAAAATCCAGTAGTGAATGAT TCAGTAAGTTCTGGTTCAAGAGTTAAGGTTAATTTAGCTCCCTGGGTTCATGGAAAACAA CCCAAAATATCTCAGCTTGGTGAAAGCAGCAGTCTTGATAAATCTCTTGAGAATTGTGAA GATATTGGGTCAAGTAGGGAGCAAAAATCTTTAAACAAACAAGTAAACGTTGATGGGACT GATTTTGAGAAAGATATCAAATTGGAATCAAAAGTTGAAGCCCATGTTGACAAGGGGATT ACTTATGCTAACGAGTCAGTAAGATTGCCATGGGAAGGTGACAAGTTGAGAAAAAGTAAT GCAGAATTGGCAGAGAAATTGATACCTGAGGCTCAACTGAAGAGGCTTAGGAATGCAGCA TTGAGGATGGTGGAGAGAATAAAGGTTGGGTCAGGTGGTGTAACACAGGAACTTGTTGAC TCCATTCAGAAAAAGTGGAAAGTGGATGAGATTGTTAAATTGAGATTTGAAGGTGCTCCT TCTCATAATATGAAGAGGACACATGATATTCTAGAGGTACATACATTTCTCTTCATTCTT GTAAAACCTTTCGTCACCGAGATTGTTAAAAACTTCTCTTCTCAGAATATGTCAACTTTG AATTCCATAGTGTTATACAGAGGAATATCATACAAGCTTCCTTGTGTACAATCATTTACT TCAAAAAACCATGATGTTAATGAATCAGAGTATCCAAATAATGATAGTTGTCAAAGCCTT GGAGTCAAATGCTTAAATGAAGCTGTTGAAAGGCCAAGAAATGGTTCCACTGATCTGTCT GGTGAAGAAATAGTGGATTTAAGCGAGCTCAACATGATTTTGGATGAAGTTGGTCCACGA TTTAAAGATTGGTCGGGTCGTGGGCCAATGCCTGTTGATGCTGATCTGTTGCCTGCTGTT GTTCCTGGATATAGACCTCCTTTTCGCCGTCTTCCTTATGGAGCTAAACTTAACCTAAAA AATAAAGAAATGACATACCTACGCAGAACTGCAAGAATTATGCCCCCTCATTTTGCTTTA GGAAGGAACAGACAATTGCAAGGTTTAGCTGCAGCCATGGTTAAACTCTGGAGAAGAAGC GCTATTGCCAAGATAGCCATAAAACGTGGTGTGCTTAACACAAGCAATGAAAGAATGGCA GAAGAACTTAAGGTATTGACCGGAGGAACACTACTCTCCAGGAATAAGGATTATATTGTC TTTTACAGGGGCAATGATTTCCTGTCACCTCGTGTCACAGAAGCGCTTGAAGAAGCAGAG AGAAAAAGTGATTTCTTGCAGGATCAAGAAGAACAAGCACGGCAAAGAGCAGCAACCTCT ATTGATTCTGATACTAGAGCTCCTAAAAGACCATTGGTTGCTGGAACACTTTCTGAAACT ATGGCAGCCACTTCACGCTGGGGAAACCAACCTAGTATTGAAGAGAGGGAGAAAATGTTG AGAGATGCAGCTGTAGCAAGGCATGCTTCGCTGGTGAAGTATCTTGACGAGAAGCTAGCC CTTGCAAAAGGCAAGGTAAAAAAGGCAGAAAATATGTTACGAAAATTGCAGGAAAATCGG GAACCATCTGAGCTGCCTACTGATTTGGAAATTTTATCTGCTGAGGAAAGATTTCTTTTC CGCAAAATGGGTCTTAGCATGAAACCCTTTCTGCTTCTAGGGAGGCGAGATGTTTTTGAT GGAACTATAGAGAATATACATTTACATTGGAAATATCGGGAGCTTGTGAAGATCATTGCG GAGAGGAGGAATGCAGCACAAATAAAACACATTGCAATTACTCTTGAGGCTGAAAGTGGT GGCCTTTTGGTATCTATAGATAAGACTACCCAAGGCTATGCAATTATACTCTATCGTGGG AAAAATTACCAGCGTCCTAATGAATTCAGGCCCAAAAATCTTCTGACTAAGAGACAAGCA TTGGCCCGTTCAATTGAACTCCAAAGACGTGAGGCACTAAAGCATCACATAACAGAGTTG CAGGATAAGATTCAAAACTTGAAGTCTGAGCTAGAAGATACGGAGATGGTTGAGGAGATT GATGAGGAAACCTTATTCTCGAGATTAGATGCATCTGATGATGAGGATGATGTGGAAAAG CAATTTGATGCGGAGGATCACAACTAG

Peptide Sequence

PEP ID	Solyc07g039500.3.1
PEP Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9QS67_9ROSA)
Sequence	MAAMASTPLSFDYISSKQLQFSIPIPKIQDWHSCRAKNVVRVYCSSPQTIHSNREKQINE IKKQRKPRPSFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEEVVEAQVQISKLENPVVND SVSSGSRVKVNLAPWVHGKQPKISQLGESSSLDKSLENCEDIGSSREQKSLNKQVNVDGT DFEKDIKLESKVEAHVDKGITYANESVRLPWEGDKLRKSNAELAEKLIPEAQLKRLRNAA LRMVERIKVGSGGVTQELVDSIQKKWKVDEIVKLRFEGAPSHNMKRTHDILEVHTFLFIL VKPFVTEIVKNFSSQNMSTLNSIVLYRGISYKLPCVQSFTSKNHDVNESEYPNNDSCQSL GVKCLNEAVERPRNGSTDLSGEEIVDLSELNMILDEVGPRFKDWSGRGPMPVDADLLPAV VPGYRPPFRRLPYGAKLNLKNKEMTYLRRTARIMPPHFALGRNRQLQGLAAAMVKLWRRS AIAKIAIKRGVLNTSNERMAEELKVLTGGTLLSRNKDYIVFYRGNDFLSPRVTEALEEAE RKSDFLQDQEEQARQRAATSIDSDTRAPKRPLVAGTLSETMAATSRWGNQPSIEEREKML RDAAVARHASLVKYLDEKLALAKGKVKKAENMLRKLQENREPSELPTDLEILSAEERFLF RKMGLSMKPFLLLGRRDVFDGTIENIHLHWKYRELVKIIAERRNAAQIKHIAITLEAESG GLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITEL QDKIQNLKSELEDTEMVEEIDEETLFSRLDASDDEDDVEKQFDAEDHN*

Transcript Sequence

Transcript ID	Solyc07g039500.3.1
Transcript Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9QS67_9ROSA)
Sequence	ATGGCCGCTATGGCGTCTACGCCGTTATCATTTGATTACATTTCTTCGAAGCAGCTTCAA TTTTCAATACCCATACCCAAAATTCAAGATTGGCACAGCTGTAGAGCTAAAAATGTAGTT AGAGTTTATTGTTCTTCTCCCCAAACAATCCATTCGAACAGAGAAAAGCAAATCAATGAG ATAAAGAAGCAGAGGAAACCCAGACCAAGCTTTGTTAAACAAGTTCAAGATAAATGGTCT GTAAAACCCACTTCATTGAGGGAGAAATTCCCTTGGCAAGAAGGGAATTCAGTATCAGTA GAAGAAGTTGTAGAAGCACAAGTGCAGATTTCTAAGTTGGAAAATCCAGTAGTGAATGAT TCAGTAAGTTCTGGTTCAAGAGTTAAGGTTAATTTAGCTCCCTGGGTTCATGGAAAACAA CCCAAAATATCTCAGCTTGGTGAAAGCAGCAGTCTTGATAAATCTCTTGAGAATTGTGAA GATATTGGGTCAAGTAGGGAGCAAAAATCTTTAAACAAACAAGTAAACGTTGATGGGACT GATTTTGAGAAAGATATCAAATTGGAATCAAAAGTTGAAGCCCATGTTGACAAGGGGATT ACTTATGCTAACGAGTCAGTAAGATTGCCATGGGAAGGTGACAAGTTGAGAAAAAGTAAT GCAGAATTGGCAGAGAAATTGATACCTGAGGCTCAACTGAAGAGGCTTAGGAATGCAGCA TTGAGGATGGTGGAGAGAATAAAGGTTGGGTCAGGTGGTGTAACACAGGAACTTGTTGAC TCCATTCAGAAAAAGTGGAAAGTGGATGAGATTGTTAAATTGAGATTTGAAGGTGCTCCT TCTCATAATATGAAGAGGACACATGATATTCTAGAGGTACATACATTTCTCTTCATTCTT GTAAAACCTTTCGTCACCGAGATTGTTAAAAACTTCTCTTCTCAGAATATGTCAACTTTG AATTCCATAGTGTTATACAGAGGAATATCATACAAGCTTCCTTGTGTACAATCATTTACT TCAAAAAACCATGATGTTAATGAATCAGAGTATCCAAATAATGATAGTTGTCAAAGCCTT GGAGTCAAATGCTTAAATGAAGCTGTTGAAAGGCCAAGAAATGGTTCCACTGATCTGTCT GGTGAAGAAATAGTGGATTTAAGCGAGCTCAACATGATTTTGGATGAAGTTGGTCCACGA TTTAAAGATTGGTCGGGTCGTGGGCCAATGCCTGTTGATGCTGATCTGTTGCCTGCTGTT GTTCCTGGATATAGACCTCCTTTTCGCCGTCTTCCTTATGGAGCTAAACTTAACCTAAAA AATAAAGAAATGACATACCTACGCAGAACTGCAAGAATTATGCCCCCTCATTTTGCTTTA GGAAGGAACAGACAATTGCAAGGTTTAGCTGCAGCCATGGTTAAACTCTGGAGAAGAAGC GCTATTGCCAAGATAGCCATAAAACGTGGTGTGCTTAACACAAGCAATGAAAGAATGGCA GAAGAACTTAAGGTATTGACCGGAGGAACACTACTCTCCAGGAATAAGGATTATATTGTC TTTTACAGGGGCAATGATTTCCTGTCACCTCGTGTCACAGAAGCGCTTGAAGAAGCAGAG AGAAAAAGTGATTTCTTGCAGGATCAAGAAGAACAAGCACGGCAAAGAGCAGCAACCTCT ATTGATTCTGATACTAGAGCTCCTAAAAGACCATTGGTTGCTGGAACACTTTCTGAAACT ATGGCAGCCACTTCACGCTGGGGAAACCAACCTAGTATTGAAGAGAGGGAGAAAATGTTG AGAGATGCAGCTGTAGCAAGGCATGCTTCGCTGGTGAAGTATCTTGACGAGAAGCTAGCC CTTGCAAAAGGCAAGGTAAAAAAGGCAGAAAATATGTTACGAAAATTGCAGGAAAATCGG GAACCATCTGAGCTGCCTACTGATTTGGAAATTTTATCTGCTGAGGAAAGATTTCTTTTC CGCAAAATGGGTCTTAGCATGAAACCCTTTCTGCTTCTAGGGAGGCGAGATGTTTTTGAT GGAACTATAGAGAATATACATTTACATTGGAAATATCGGGAGCTTGTGAAGATCATTGCG GAGAGGAGGAATGCAGCACAAATAAAACACATTGCAATTACTCTTGAGGCTGAAAGTGGT GGCCTTTTGGTATCTATAGATAAGACTACCCAAGGCTATGCAATTATACTCTATCGTGGG AAAAATTACCAGCGTCCTAATGAATTCAGGCCCAAAAATCTTCTGACTAAGAGACAAGCA TTGGCCCGTTCAATTGAACTCCAAAGACGTGAGGCACTAAAGCATCACATAACAGAGTTG CAGGATAAGATTCAAAACTTGAAGTCTGAGCTAGAAGATACGGAGATGGTTGAGGAGATT GATGAGGAAACCTTATTCTCGAGATTAGATGCATCTGATGATGAGGATGATGTGGAAAAG CAATTTGATGCGGAGGATCACAACTAG