Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g032100.3.1
CDS Infomation	Coatomer subunit alpha (AHRD V3.3 *** K4CDF4_SOLLC)
Sequence	ATGCTGACCAAGTTTGAGACCAAGAGTAATAGAGTGAAAGGTTTGAGTTTTCACACACAA AGGCCATGGATCTTAGCCAGTCTTCATAGTGGGGTTATTCAGCTATGGGATTACCGTATG GGAACTCTCATTGATCGATTTGATGAGCACGATGGCCCTGTTCGCGGTGTCCATTTCCAC AAATCTCAGCCTCTGTTTGTTTCTGGAGGAGATGATTACAAAATTAAGGTTTGGAACTAC AAGCTGCATAGGTGCTTGTTTACCCTGCTTGGACATCTTGATTATATCCGAACTGTTCAA TTTCACCACGAATATCCATGGATTGTTAGTGCAAGTGATGACCAGACTATTCGAATATGG AACTGGCAGTCTCGTACTTGTATTTCTGTCTTGACTGGCCACAATCATTATGTAATGTGT GCGTCATTTCATCCCAAAGAGGACTTGGTTGTCTCTGCTTCCTTGGATCAGACTGTTCGT GTCTGGGATATTGGTGCCCTAAGAAAGAAAACCATTTCTCCTGCTGATGATCTCTTGCGG TTGAGTCAGATGAATACTGACTTCTTTGGTGGAGTGGATGCTGTGGTGAAGTATGTCTTG GAGGGTCATGATAGAGGGGTTAACTGGGCATCATTTCATCCTACACTCCCCCTTATAGTT TCTGGTGCAGATGATCGCCAAGTGAAAATTTGGCGGATGAATGATACAAAAGCTTGGGAG GTGGACACGTTGAGAGGACACATGAACAATGTTTCATGCGTTCTATTCCATCCAAGGCAA GATATTATTGTTTCAAATTCAGAGGATAAGAGCATCCGAGTGTGGGATGCAACAAAAAGG ACTGGTCTTCAGACATTCCGCAGGGAGCATGATAGATTTTGGATCCTTGCATCTCATCCA GAGATGAATCTTCTAGCAGCTGGTCATGACAGTGGGATGATAGTATTCAAGTTGGAGAGA GAACGGCCTGCATTTTCTGTGAGCAGTGATTCTTTATTTTATGTAAAGGATCGCTTTCTC CGTGTATATGAGTATTCAACCCAGAAGGACACACAGTTGATACCAATTAGAAGGCCCGGC TCAAACAATGTGAATCAAGGTCCACGAACTCTTTCATATAGTCCAACGGAAAATGCTGTC TTGATATGTTCAGACACAGATGGTGGTTCCTATGAACTTTACATTGTACCCAAAGATAGT CATGGTAGGGGTGATACTGTTCAAGATGCAAAAAGAGGAACCGGAGGATCAGCTGTGTTC GTTGCCCGAAACAGGTTTGCGGTGCTTGAGAAGAGCACTAATCAAGTCCTGGTAAAAAAT CTCAAGAATGAAATTGTCAAGAAAAGCCTTCTTCCTATGGCAACTGATGCAATATTTTAT GCTGGCACTGGAAACTTACTATGTAGGGCAGAGGATAGAGTTGTCATTTTTGATCTCCAG CAGAGAATTATTCTTGGAGATCTTCAGACTTCTTTTATCAGGTATGTTGTTTGGTCACCT GATATGGAAAGTGTCGCTTTGATTAGCAAGCACTCCATAGTTATAGCTGATAAGAAGCTT GTGCACCGTTGCACCCTTCATGAGACAATTCGTGTCAAAAGTGGTGCCTGGGATGACAAT GGGGTATTCATATATACCACACTTACCCACATTAAGTACTGTCTCCCCAACGGGGATTGT GGAATCGTCAAAACTCTAGATGTTCCTGTCTACATTACAAAAATATATGGGAACGCTATC TTTTGCTTGGATAGAGATGGCAAAAACCGTCCTATTATTATTGATTCAACTGAATATGTA TTCAAGTTGTGTCTGCTTAGAAAGAGATATGACCAAGTTATGAGTATGATCAGAAACTCA GAGCTCTGTGGTCAGGCGATGATTTCATATTTGCAGCAGAAGGGTTTTCCAGAAGTTGCC CTTCATTTTGTGAAGGACGAGCGCACTCGTTTCAACTTAGCACTTGAAAGTGGGAATATT GAGATAGCTCTTGAATCTGCTAAGAAGATTGACGAAAAAGATCATTGGTATAGGCTTGGC GTGGAAGCCCTTAGGCAGGGCAATGCAGGTATTGTTGAATATGCCTACCAAAAGACAAAG AATTTTGAGAGGCTCTCTTTCCTATATCTAATAACAGGAAATGTGGAGAAGTTATCTAAA ATGATGAAAATTGCTGAGGTCAAAAATGAAGTAATGGGTCAGTTCCATGATGCCTTGTAC CTCGGTGATGTCCGCGAGCGTGTTAAAATTTTGGAAAATGCTGGTCATCTGCCCCTTGCG TACATCACAGCTACTGTCCATGGGCTCAATGATACCGCTGAGCGTCTTGCGGAGGAAGTG GGGGATAATGTTCCATCATTGCCAAAGGGGAAGAAATCTTCAATGTTGCTTCCCCCAACT CCCATCTTGGGTGGTGGAGACTGGCCTTTGCTGATGGTAACGAAAGGGATATTTGAAGGT GGTCTGGATATTGCAGGCAAGGGAGGACAAGACGAATATGAAGAGGCTACGGATGCAGAC TGGGGTGAGTCATTGGACATCGGTGAGGTGGAAAATCTACAGAATGGGGACATCAGTATG GTGCTTGGTGATGAGGAAGGACAAGAAGGAAATGATGAGGAGGAGGGAGGATGGGATCTT GAGGATCTGGATCTGCCTTCTGATGCAGACACACCTAAGACTACTTCCAATGCTCGTTCT TCTGTGTTTGTCACCCCAACACCTGGCATGCCTGTCAGCCAGATTTGGGTCCAAAAATCA TCTCTAGCTGCTGAACATGCAGCTGCTGGAAATTTTGATACTGCTATGCGGTTGTTGAGT AGACAACTAGGGATTAGGAACTTCTCTCCTTTAAAATCACTGTTTATTGATCTTCATGTG GGTAGCCACACTCATCTGCTTGCCTTTTCCTCGGCGCCGGTCATCTCCGTGGCAATTGAG AGAGGTTGGAGTGAGTCAGCTAGTCCTAATGTTCGAGGTCCACCTGCTCTTATATTCAGT TTTGCTCAGTTGGAGGAAAAACTTAAAGCTTCTTATAAAGCGACTACTGGTGGAAAATTT TCTGATGCACTTAGACTATTCCTGAGCATCCTTCACACCATTCCTCTGATTGTGATTGAG TCGAGACGAGAAGTGGATGAAGTAAAGGAATTGATTGTCATAGTGAAAGAGTATGTTTTG GGTTTGCAGATGGAGCTTAAGAGGAAGGAATTGAAAGACAATCCTATTCGCCAGCAGGAA CTGGCAGCCTATTTCACTCACTGTAATCTGCAGCTTCCTCACTTGAGACTGGCGTTACAG AATGCTATGTCTATCTGCTACAAGGCCGGAAATCTTAGCTCAGCAGCGAACTTTGCTAGA AGACTCTTGGAGACCAATCCCACCAATGAAAGCCAAGCCAGAACAGCCCGCCAGGTTCTG CAAGCAGCTGAGAAAAATATGCGAGATGTTACACAGTTGAATTATGATTTCAGAAATCCT TTTACAGTGTGTGGGGCAACATATGTCCCGATATACCGGGGTCAGAAGGATGTCACTTGT CCTTACTGTGGTACTCATTTTGTACTGTCTCAGCAAGGGGGGCTTTGTACTGTTTGTGAT CTTGCAGTTGTTGGAGCTGATGCCTCTGGTTTGCTTTGCTCGGCATCACAGATCAGGTGA

Peptide Sequence

PEP ID	Solyc07g032100.3.1
PEP Infomation	Coatomer subunit alpha (AHRD V3.3 *** K4CDF4_SOLLC)
Sequence	MLTKFETKSNRVKGLSFHTQRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTISPADDLLR LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE VDTLRGHMNNVSCVLFHPRQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILASHP EMNLLAAGHDSGMIVFKLERERPAFSVSSDSLFYVKDRFLRVYEYSTQKDTQLIPIRRPG SNNVNQGPRTLSYSPTENAVLICSDTDGGSYELYIVPKDSHGRGDTVQDAKRGTGGSAVF VARNRFAVLEKSTNQVLVKNLKNEIVKKSLLPMATDAIFYAGTGNLLCRAEDRVVIFDLQ QRIILGDLQTSFIRYVVWSPDMESVALISKHSIVIADKKLVHRCTLHETIRVKSGAWDDN GVFIYTTLTHIKYCLPNGDCGIVKTLDVPVYITKIYGNAIFCLDRDGKNRPIIIDSTEYV FKLCLLRKRYDQVMSMIRNSELCGQAMISYLQQKGFPEVALHFVKDERTRFNLALESGNI EIALESAKKIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNVEKLSK MMKIAEVKNEVMGQFHDALYLGDVRERVKILENAGHLPLAYITATVHGLNDTAERLAEEV GDNVPSLPKGKKSSMLLPPTPILGGGDWPLLMVTKGIFEGGLDIAGKGGQDEYEEATDAD WGESLDIGEVENLQNGDISMVLGDEEGQEGNDEEEGGWDLEDLDLPSDADTPKTTSNARS SVFVTPTPGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLSRQLGIRNFSPLKSLFIDLHV GSHTHLLAFSSAPVISVAIERGWSESASPNVRGPPALIFSFAQLEEKLKASYKATTGGKF SDALRLFLSILHTIPLIVIESRREVDEVKELIVIVKEYVLGLQMELKRKELKDNPIRQQE LAAYFTHCNLQLPHLRLALQNAMSICYKAGNLSSAANFARRLLETNPTNESQARTARQVL QAAEKNMRDVTQLNYDFRNPFTVCGATYVPIYRGQKDVTCPYCGTHFVLSQQGGLCTVCD LAVVGADASGLLCSASQIR*

Transcript Sequence

Transcript ID	Solyc07g032100.3.1
Transcript Infomation	Coatomer subunit alpha (AHRD V3.3 *** K4CDF4_SOLLC)
Sequence	AAGTTTTTATGATCACACGAAACACGGATATTATACTGCGGAAATATATTAGCAAATAAA AGAGTCTTCCTTTTTTCTAAAAAAGGGTCTTAATATTAAAACTCATCAATTACTACGTAT GAACAAGTAGATCCACCAGCGGCAGCTCTTGCATTGCACCTTGCTAAAATCTTCAAGGAA AAATGCACATTTCATCTCAGATCTGATTCCAATTCCAATTTCATCTCTCAATCATTTAGG GTTTCGGATTTCAATCAAATTCTAAGTCTTTACACTCTACTCTCTCTCTCTCTCTCTCTC TCACTGTTGTGTGTTCATAGATAGATACGGAATTGTTAAGATGCTGACCAAGTTTGAGAC CAAGAGTAATAGAGTGAAAGGTTTGAGTTTTCACACACAAAGGCCATGGATCTTAGCCAG TCTTCATAGTGGGGTTATTCAGCTATGGGATTACCGTATGGGAACTCTCATTGATCGATT TGATGAGCACGATGGCCCTGTTCGCGGTGTCCATTTCCACAAATCTCAGCCTCTGTTTGT TTCTGGAGGAGATGATTACAAAATTAAGGTTTGGAACTACAAGCTGCATAGGTGCTTGTT TACCCTGCTTGGACATCTTGATTATATCCGAACTGTTCAATTTCACCACGAATATCCATG GATTGTTAGTGCAAGTGATGACCAGACTATTCGAATATGGAACTGGCAGTCTCGTACTTG TATTTCTGTCTTGACTGGCCACAATCATTATGTAATGTGTGCGTCATTTCATCCCAAAGA GGACTTGGTTGTCTCTGCTTCCTTGGATCAGACTGTTCGTGTCTGGGATATTGGTGCCCT AAGAAAGAAAACCATTTCTCCTGCTGATGATCTCTTGCGGTTGAGTCAGATGAATACTGA CTTCTTTGGTGGAGTGGATGCTGTGGTGAAGTATGTCTTGGAGGGTCATGATAGAGGGGT TAACTGGGCATCATTTCATCCTACACTCCCCCTTATAGTTTCTGGTGCAGATGATCGCCA AGTGAAAATTTGGCGGATGAATGATACAAAAGCTTGGGAGGTGGACACGTTGAGAGGACA CATGAACAATGTTTCATGCGTTCTATTCCATCCAAGGCAAGATATTATTGTTTCAAATTC AGAGGATAAGAGCATCCGAGTGTGGGATGCAACAAAAAGGACTGGTCTTCAGACATTCCG CAGGGAGCATGATAGATTTTGGATCCTTGCATCTCATCCAGAGATGAATCTTCTAGCAGC TGGTCATGACAGTGGGATGATAGTATTCAAGTTGGAGAGAGAACGGCCTGCATTTTCTGT GAGCAGTGATTCTTTATTTTATGTAAAGGATCGCTTTCTCCGTGTATATGAGTATTCAAC CCAGAAGGACACACAGTTGATACCAATTAGAAGGCCCGGCTCAAACAATGTGAATCAAGG TCCACGAACTCTTTCATATAGTCCAACGGAAAATGCTGTCTTGATATGTTCAGACACAGA TGGTGGTTCCTATGAACTTTACATTGTACCCAAAGATAGTCATGGTAGGGGTGATACTGT TCAAGATGCAAAAAGAGGAACCGGAGGATCAGCTGTGTTCGTTGCCCGAAACAGGTTTGC GGTGCTTGAGAAGAGCACTAATCAAGTCCTGGTAAAAAATCTCAAGAATGAAATTGTCAA GAAAAGCCTTCTTCCTATGGCAACTGATGCAATATTTTATGCTGGCACTGGAAACTTACT ATGTAGGGCAGAGGATAGAGTTGTCATTTTTGATCTCCAGCAGAGAATTATTCTTGGAGA TCTTCAGACTTCTTTTATCAGGTATGTTGTTTGGTCACCTGATATGGAAAGTGTCGCTTT GATTAGCAAGCACTCCATAGTTATAGCTGATAAGAAGCTTGTGCACCGTTGCACCCTTCA TGAGACAATTCGTGTCAAAAGTGGTGCCTGGGATGACAATGGGGTATTCATATATACCAC ACTTACCCACATTAAGTACTGTCTCCCCAACGGGGATTGTGGAATCGTCAAAACTCTAGA TGTTCCTGTCTACATTACAAAAATATATGGGAACGCTATCTTTTGCTTGGATAGAGATGG CAAAAACCGTCCTATTATTATTGATTCAACTGAATATGTATTCAAGTTGTGTCTGCTTAG AAAGAGATATGACCAAGTTATGAGTATGATCAGAAACTCAGAGCTCTGTGGTCAGGCGAT GATTTCATATTTGCAGCAGAAGGGTTTTCCAGAAGTTGCCCTTCATTTTGTGAAGGACGA GCGCACTCGTTTCAACTTAGCACTTGAAAGTGGGAATATTGAGATAGCTCTTGAATCTGC TAAGAAGATTGACGAAAAAGATCATTGGTATAGGCTTGGCGTGGAAGCCCTTAGGCAGGG CAATGCAGGTATTGTTGAATATGCCTACCAAAAGACAAAGAATTTTGAGAGGCTCTCTTT CCTATATCTAATAACAGGAAATGTGGAGAAGTTATCTAAAATGATGAAAATTGCTGAGGT CAAAAATGAAGTAATGGGTCAGTTCCATGATGCCTTGTACCTCGGTGATGTCCGCGAGCG TGTTAAAATTTTGGAAAATGCTGGTCATCTGCCCCTTGCGTACATCACAGCTACTGTCCA TGGGCTCAATGATACCGCTGAGCGTCTTGCGGAGGAAGTGGGGGATAATGTTCCATCATT GCCAAAGGGGAAGAAATCTTCAATGTTGCTTCCCCCAACTCCCATCTTGGGTGGTGGAGA CTGGCCTTTGCTGATGGTAACGAAAGGGATATTTGAAGGTGGTCTGGATATTGCAGGCAA GGGAGGACAAGACGAATATGAAGAGGCTACGGATGCAGACTGGGGTGAGTCATTGGACAT CGGTGAGGTGGAAAATCTACAGAATGGGGACATCAGTATGGTGCTTGGTGATGAGGAAGG ACAAGAAGGAAATGATGAGGAGGAGGGAGGATGGGATCTTGAGGATCTGGATCTGCCTTC TGATGCAGACACACCTAAGACTACTTCCAATGCTCGTTCTTCTGTGTTTGTCACCCCAAC ACCTGGCATGCCTGTCAGCCAGATTTGGGTCCAAAAATCATCTCTAGCTGCTGAACATGC AGCTGCTGGAAATTTTGATACTGCTATGCGGTTGTTGAGTAGACAACTAGGGATTAGGAA CTTCTCTCCTTTAAAATCACTGTTTATTGATCTTCATGTGGGTAGCCACACTCATCTGCT TGCCTTTTCCTCGGCGCCGGTCATCTCCGTGGCAATTGAGAGAGGTTGGAGTGAGTCAGC TAGTCCTAATGTTCGAGGTCCACCTGCTCTTATATTCAGTTTTGCTCAGTTGGAGGAAAA ACTTAAAGCTTCTTATAAAGCGACTACTGGTGGAAAATTTTCTGATGCACTTAGACTATT CCTGAGCATCCTTCACACCATTCCTCTGATTGTGATTGAGTCGAGACGAGAAGTGGATGA AGTAAAGGAATTGATTGTCATAGTGAAAGAGTATGTTTTGGGTTTGCAGATGGAGCTTAA GAGGAAGGAATTGAAAGACAATCCTATTCGCCAGCAGGAACTGGCAGCCTATTTCACTCA CTGTAATCTGCAGCTTCCTCACTTGAGACTGGCGTTACAGAATGCTATGTCTATCTGCTA CAAGGCCGGAAATCTTAGCTCAGCAGCGAACTTTGCTAGAAGACTCTTGGAGACCAATCC CACCAATGAAAGCCAAGCCAGAACAGCCCGCCAGGTTCTGCAAGCAGCTGAGAAAAATAT GCGAGATGTTACACAGTTGAATTATGATTTCAGAAATCCTTTTACAGTGTGTGGGGCAAC ATATGTCCCGATATACCGGGGTCAGAAGGATGTCACTTGTCCTTACTGTGGTACTCATTT TGTACTGTCTCAGCAAGGGGGGCTTTGTACTGTTTGTGATCTTGCAGTTGTTGGAGCTGA TGCCTCTGGTTTGCTTTGCTCGGCATCACAGATCAGGTGATTTCAGCTTCTCATGCAGTT GTATTCGGCCATGTCATTCAGCAGATGATTCTAGTCTTACGTCTTAGAAGAAGTCTAGGC ATGGGTAATTATGAACATGTTTTTTTATGGGATTGTATCAGCGGTTTATATTTTTGTTTC TATAATTTTGCAATCAGTTTTTACAGACCGACCTTTTGCCTTGGTTATCTAAATTTTTTA TTGTAATAAAACATGTAAGATTTTTAGTTCAACC