Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g025250.2.1
CDS Infomation

Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061F1G5_THECC)
Sequence

ATGAAATATAGAGTTGCAATTTCCTTGTTCCTTGGTGGTCATCTCCCTCCCAATTTGCCA
TCTTTTCTTCTTCGATCCAGCAGTGGTGTTTCCGTTCCCCATGCTAGTCTCCTACCTGGT
GCTCTCTCAAGGTCTACTTGTGGAATCAGGTTCTCTACTTTTACTTCCTTCACCAATTCA
CATGATTATAAAGAAGTATATTCTGATTTTTCCAAAGAAGATGTTGAAACAATTGAAGCC
ATTTTTAAACAACCCGGAACCCATGTGCATAATAAACTCGAGCAATGTGGTGTAAGGCCC
ACACACAATCTAGTTACTCTTATTCTTTCTCGTGCACGGAATAATTGGGAAGTTGCATTC
ACTTTCTTCATATGGGCCACCAAACAAACAGGTTATGTTCATTCTGTGCGTCAATACCAT
TCTATGATATCTATACTTGGAAAAATGAGAAAGTTTGACACTGCATGGTCACTCATTGAG
GAAATGAGAGGTGGTAAAGATAGACCATCGCTTGTCAATCCTCAGACGCTCTTGATTATG
ATTAGGAAATACTGTGCTGTGCATGAAGTTGGAAAAGCTATCAGTACTTTTTATGCATTT
AAGCGGTTTAATTTAGATATTGAAATAGAAGAATTTCAAGACCTTTTGTCTGCCCTTGTT
CGCTACAAAAATGTAAAAGATGCCGAGCACTTGCTTTTTTGCAATACGAATGTTTTCCCG
TTGAATACCAAGAGTTTGAATATCATTCTGAATGGATGGTGTCTTGCCCGTGATGATTTA
AGTGAGGGAAAGAGGATTTGGAGGTTGATGAAGGAAAAAAGGATTCCTCGTGATGTTTTT
TCATATTGTAGTATCATGTCTTGCTATTCGAGGGCTGGTAGACTCAATGTTGTGCTTAAG
CTTTTCGATGAGATGAAATTGTGTGGGGTTGCACCTGATGTTAAGGTTTATAATGCTGTC
ATTCATGCTCTTGCAAAAGGCAGGTTGGTTAAACAAGCTAGGAGTGTGATGAAGATGATG
GAAGAGAATGATCTTGCTCCAAACGCTGTTACTTATAACTCATTAATCATGCCTCTCTGC
AAAGCTCGATTACCAGATGAAGCTCAAGAGATCTTCAATGAGATGATTCAACGAGGCATA
CATCCTACTGTCCGAACTTACCATGCATTGCTTCGTAGCCTGAGGACAGGGGAAGAAGTG
TTCGAGCACTTGCAGAAGATGAACACGATGGGATGTATTCCAACTCATGACACTTATATA
ATGTTAATCCGGAAGTTTTGCCGATGGTGCCAACTTGATAATGTTTTCATGTTGTGGGAT
AAGATGAGCAAGATTGGCTTGGACCATGATCGAAGTTCATATATAGTGCTGATACATGGA
CTCTTTTTGAATGGGAAGCTGGAGGAGTCGTACAAATACTATCACGAAATGAAGCAAAAA
GGTTTACTGCCGGAGCCCAAGATAGATGAAATGCTTCAAGCTTGGGTAGCTGGCAGGAGA
GATTCTCAAGAGAATAAAGTAACATGTCATCAGGAGAACAAAAAGGTGGTCAAATTTGAA
AAAGCTGATAAAGAAAGGGATTTCCATAAAAAACCTGAAATGAGAAAAGTTATGAGAGAG
CGTGGCTTTTCTTTCTGGGGTCAGTAG

Peptide Sequence

PEP ID

Solyc07g025250.2.1
PEP Infomation

Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061F1G5_THECC)
Sequence

MKYRVAISLFLGGHLPPNLPSFLLRSSSGVSVPHASLLPGALSRSTCGIRFSTFTSFTNS
HDYKEVYSDFSKEDVETIEAIFKQPGTHVHNKLEQCGVRPTHNLVTLILSRARNNWEVAF
TFFIWATKQTGYVHSVRQYHSMISILGKMRKFDTAWSLIEEMRGGKDRPSLVNPQTLLIM
IRKYCAVHEVGKAISTFYAFKRFNLDIEIEEFQDLLSALVRYKNVKDAEHLLFCNTNVFP
LNTKSLNIILNGWCLARDDLSEGKRIWRLMKEKRIPRDVFSYCSIMSCYSRAGRLNVVLK
LFDEMKLCGVAPDVKVYNAVIHALAKGRLVKQARSVMKMMEENDLAPNAVTYNSLIMPLC
KARLPDEAQEIFNEMIQRGIHPTVRTYHALLRSLRTGEEVFEHLQKMNTMGCIPTHDTYI
MLIRKFCRWCQLDNVFMLWDKMSKIGLDHDRSSYIVLIHGLFLNGKLEESYKYYHEMKQK
GLLPEPKIDEMLQAWVAGRRDSQENKVTCHQENKKVVKFEKADKERDFHKKPEMRKVMRE
RGFSFWGQ*

Transcript Sequence

Transcript ID

Solyc07g025250.2.1
Transcript Infomation

Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061F1G5_THECC)
Sequence

TTAGGGCAACGAAAGAAATTGTTTGATAATGAAATATAGAGTTGCAATTTCCTTGTTCCT
TGGTGGTCATCTCCCTCCCAATTTGCCATCTTTTCTTCTTCGATCCAGCAGTGGTGTTTC
CGTTCCCCATGCTAGTCTCCTACCTGGTGCTCTCTCAAGGTCTACTTGTGGAATCAGGTT
CTCTACTTTTACTTCCTTCACCAATTCACATGATTATAAAGAAGTATATTCTGATTTTTC
CAAAGAAGATGTTGAAACAATTGAAGCCATTTTTAAACAACCCGGAACCCATGTGCATAA
TAAACTCGAGCAATGTGGTGTAAGGCCCACACACAATCTAGTTACTCTTATTCTTTCTCG
TGCACGGAATAATTGGGAAGTTGCATTCACTTTCTTCATATGGGCCACCAAACAAACAGG
TTATGTTCATTCTGTGCGTCAATACCATTCTATGATATCTATACTTGGAAAAATGAGAAA
GTTTGACACTGCATGGTCACTCATTGAGGAAATGAGAGGTGGTAAAGATAGACCATCGCT
TGTCAATCCTCAGACGCTCTTGATTATGATTAGGAAATACTGTGCTGTGCATGAAGTTGG
AAAAGCTATCAGTACTTTTTATGCATTTAAGCGGTTTAATTTAGATATTGAAATAGAAGA
ATTTCAAGACCTTTTGTCTGCCCTTGTTCGCTACAAAAATGTAAAAGATGCCGAGCACTT
GCTTTTTTGCAATACGAATGTTTTCCCGTTGAATACCAAGAGTTTGAATATCATTCTGAA
TGGATGGTGTCTTGCCCGTGATGATTTAAGTGAGGGAAAGAGGATTTGGAGGTTGATGAA
GGAAAAAAGGATTCCTCGTGATGTTTTTTCATATTGTAGTATCATGTCTTGCTATTCGAG
GGCTGGTAGACTCAATGTTGTGCTTAAGCTTTTCGATGAGATGAAATTGTGTGGGGTTGC
ACCTGATGTTAAGGTTTATAATGCTGTCATTCATGCTCTTGCAAAAGGCAGGTTGGTTAA
ACAAGCTAGGAGTGTGATGAAGATGATGGAAGAGAATGATCTTGCTCCAAACGCTGTTAC
TTATAACTCATTAATCATGCCTCTCTGCAAAGCTCGATTACCAGATGAAGCTCAAGAGAT
CTTCAATGAGATGATTCAACGAGGCATACATCCTACTGTCCGAACTTACCATGCATTGCT
TCGTAGCCTGAGGACAGGGGAAGAAGTGTTCGAGCACTTGCAGAAGATGAACACGATGGG
ATGTATTCCAACTCATGACACTTATATAATGTTAATCCGGAAGTTTTGCCGATGGTGCCA
ACTTGATAATGTTTTCATGTTGTGGGATAAGATGAGCAAGATTGGCTTGGACCATGATCG
AAGTTCATATATAGTGCTGATACATGGACTCTTTTTGAATGGGAAGCTGGAGGAGTCGTA
CAAATACTATCACGAAATGAAGCAAAAAGGTTTACTGCCGGAGCCCAAGATAGATGAAAT
GCTTCAAGCTTGGGTAGCTGGCAGGAGAGATTCTCAAGAGAATAAAGTAACATGTCATCA
GGAGAACAAAAAGGTGGTCAAATTTGAAAAAGCTGATAAAGAAAGGGATTTCCATAAAAA
ACCTGAAATGAGAAAAGTTATGAGAGAGCGTGGCTTTTCTTTCTGGGGTCAGTAGAGTCA
ATGTTGATTATAAAATTACTGTTGGGAATCTGGCT