Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g019650.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103S9G9_CYNCS)
Sequence	ATGGCCTCCATCCCCTTCAAACCAACAACTCAGTTCCAACTCCAACTCTATTCTTCAACG ATTTTACTAAACCCCTTCAAGTTTCATACTAGTCTACCAAGAATTTCATCTTCCGTTCAT GTCACTCACGTGGAGACACAGACAACAGAGCAAGAAATTTCACACACCAGAAGAGATGGT AAAACTAATAGTAACGAAAATGGTTCTGGGTTTTCATCCTTTACTCCCAAATATAAGAAA TCTTATTCTGGTCAGGAAAATGGTGCCAACAGAGTTGTTCTAAAAGATAGAAATGCAAAA TTGAAACCTAAAAGAAGGAGCTCTACTACTACTACTTCTAATAATAAGGCGGTGGAGTCA AAGAAGAGTAAAATTGATTCTACATTGAGGATTGGATTAGATATGTGCTCAAAAAGAGGG GATGTACTTAGTGCAATTAAGCTATATGATTTGGCACTGCTACAAGGAATAGTAATGGGA CAGTATCATTATGCTGTACTTCTCTATCTTTGTGCTTCTGCAGCTACTGGTCTCATTCAC CCAGCAAAAAGTGGAAGTGTTAATAGGACTTTGAATGCTCCCAATGAACAGGAGTTTAGC CTTAATGACAAAGTAATTGAGCATGATTCACATTTGTTGAGCTCTTCCACTGTAGATGAA TTTGTTCAATTTATGAAGAGCAGTGCAAAAAGTGTGAGACATGATGACAATGGAATTAAA GTGAGTGAAGATGTAAGACATTATGCACTTACAAGGGGTTTTGAAATATATGAGAAAATG CTCTCAGACAAGGTACAAATTAATGAAGCAACCCTTACATCTGTTGCAAGAATGGCAATG GCATTAGGGAATGGTGATATGGCATTTGATGTTGTAAAGAAAATGAAAGAAGATGGAATA AACCCCAAACTACGATCGTATGCTCCTGCATTATCTGTTTTCTGCAATAACGGGGATGTC GACAAGGCATTTATAGTTGAACAACACATGTTAGAGAATGGTATCTACCCGGAGGAACTT GAGCTGGAGGCACTTCTAAAAGTAAGTATAGAAGCTGAAAGGAGTGAAAAAGTGTACTAT TTGTTACATAAGCTTAGAGAAGGAGTTCGACAAGTCTCACCTTCTACTGCAGATTTGATT GACAAGTGGTTCAACAGCAAGGTAGCTTCAAGGGTGGGAAAAAGAAAATGGGATGTAAGA TCCATACACAAAGCTATTAAAAATGGAGGTGGTGGCTGGCATGGACAAGGCTGGTTGGGT AATGGAAAGTGGACTGTATCACATGGAATCGTTGGCTCTGATGGCTGCTGCAAATGCTGT GCCGAGAAGCTCGTGACCATTGATCTTGATCCAGAAGAAACTGAAAAGTTTGCTAAGTCA GTTGCTTCTATAGCTGCGCAGAGAGAGAGAAATTCGAGCTTCCAGAAATTTCAAAGATGG CTTGATTACTATGGACCATTTGAAGCTGTTATTGATGGTGCAAATGTTGGTCTTTACAGC CAAAGAAAGTTTAGGCCATCTAAGGTCAATGCTGTCGTCAATGGAATTCGTCAGATGCTT CCTTCAAAAAAGTGGCCGCTAATAGTTCTGCACAATAGACGTATTACTGGAGATAAGATG GATGAACCATTCAATCGATCGTTAGTAGAGAAGTGGAAAAATGCGGATGCGATCTATGCA ACACCTACTGGGTCAAATGATGATTGGTACTGGTTGTATGCAGCTATAAAATTTCGGTGC TTGCTTGTGACCAATGATGAGATGAGGGACCATTTATTTCAACTTCTGGGAAATGACTTT TTCCCAAAATGGAAGGAAAGGCATCAGGTGCGTTTCAGTTTCTCTGAAACAGGTCCAGTA TTTCACATGCCGCCTCCATGTTCTATTGTAATTCAGGAGTCGGAAGAAGGAAACTGGCAT GTACCAATTGCCTCAGAACTTGAATCAGAAGAGGAAAGGACGTGGCTGTGCATTAGGCGT GCCAATTCACCTATGGCACATCAAGATTCTTCCAGAGTAAACATATCCAAAAATGTTGGT GGTCCCACTCACAAATGCCCTCCTACGTCATCAGACTCTCCTCACAACAAGGGAGATGCA AAGTCAAGCACAAGAAGGAAAAATCAAGTTAAGGTGACAGGAAAAACGCGCGGCAGCCAC TGTCGGGGTAAGGATGCACCTGAAGAGATGTATAGAAGTCTTAAAAACATATTACAACCG TCAATAACCTCAGATCATTGTTCCATTCTTCCAGAACTGAAGGCCGCAGAGGAGTTAGGG AGATGCGTAGTCGATTTCCAAATATAA

Peptide Sequence

PEP ID	Solyc07g019650.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103S9G9_CYNCS)
Sequence	MASIPFKPTTQFQLQLYSSTILLNPFKFHTSLPRISSSVHVTHVETQTTEQEISHTRRDG KTNSNENGSGFSSFTPKYKKSYSGQENGANRVVLKDRNAKLKPKRRSSTTTTSNNKAVES KKSKIDSTLRIGLDMCSKRGDVLSAIKLYDLALLQGIVMGQYHYAVLLYLCASAATGLIH PAKSGSVNRTLNAPNEQEFSLNDKVIEHDSHLLSSSTVDEFVQFMKSSAKSVRHDDNGIK VSEDVRHYALTRGFEIYEKMLSDKVQINEATLTSVARMAMALGNGDMAFDVVKKMKEDGI NPKLRSYAPALSVFCNNGDVDKAFIVEQHMLENGIYPEELELEALLKVSIEAERSEKVYY LLHKLREGVRQVSPSTADLIDKWFNSKVASRVGKRKWDVRSIHKAIKNGGGGWHGQGWLG NGKWTVSHGIVGSDGCCKCCAEKLVTIDLDPEETEKFAKSVASIAAQRERNSSFQKFQRW LDYYGPFEAVIDGANVGLYSQRKFRPSKVNAVVNGIRQMLPSKKWPLIVLHNRRITGDKM DEPFNRSLVEKWKNADAIYATPTGSNDDWYWLYAAIKFRCLLVTNDEMRDHLFQLLGNDF FPKWKERHQVRFSFSETGPVFHMPPPCSIVIQESEEGNWHVPIASELESEEERTWLCIRR ANSPMAHQDSSRVNISKNVGGPTHKCPPTSSDSPHNKGDAKSSTRRKNQVKVTGKTRGSH CRGKDAPEEMYRSLKNILQPSITSDHCSILPELKAAEELGRCVVDFQI*

Transcript Sequence

Transcript ID	Solyc07g019650.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103S9G9_CYNCS)
Sequence	TAGCTACTCATGATGCTAATAAAAAATATGAAGATAATTGTTGTCATCCAAATCAATGAC TAAGAAAAATTAGAGAAACAAAAACGTAAGGTAAGTTCTATTCCTTTGCTCTTACACTTC AAAAAAAAATTTTAAAACCCTACAAAAGAGGCATAACTTTCTATTTGTAGGGTTGAAGGA AATAATTTTTGGATTTGAAGTCGCAAAAAAAGTTTGGGATTTTCATGGTGGCATCAGTGG AGCAGCGCAACACCATAGTATCGAACATAAGCACTTAAGAATTTATCAATTATTTTAGAC CACAAGATTTAAAAACTTTATTACAAATCAAATCAACTCATATAAAATAAGACGGTGAGA GCATTATATTATATTTAGTGGTGTTTTGATTAAGTAGATTTCCGTTAATTATTTTCTTGT CGTCTCTTTGTTATTTTGGGAGAAAGAGCAACTCAATGTAAAAAGAGTGTAGACACTCTT ATCCTGTTGTGAAGATAGTCATGTGTCCTAATCCTAATGTAATATAGAGCTTCAGTAACG GCCACACATGGCCTCCATCCCCTTCAAACCAACAACTCAGTTCCAACTCCAACTCTATTC TTCAACGATTTTACTAAACCCCTTCAAGTTTCATACTAGTCTACCAAGAATTTCATCTTC CGTTCATGTCACTCACGTGGAGACACAGACAACAGAGCAAGAAATTTCACACACCAGAAG AGATGGTAAAACTAATAGTAACGAAAATGGTTCTGGGTTTTCATCCTTTACTCCCAAATA TAAGAAATCTTATTCTGGTCAGGAAAATGGTGCCAACAGAGTTGTTCTAAAAGATAGAAA TGCAAAATTGAAACCTAAAAGAAGGAGCTCTACTACTACTACTTCTAATAATAAGGCGGT GGAGTCAAAGAAGAGTAAAATTGATTCTACATTGAGGATTGGATTAGATATGTGCTCAAA AAGAGGGGATGTACTTAGTGCAATTAAGCTATATGATTTGGCACTGCTACAAGGAATAGT AATGGGACAGTATCATTATGCTGTACTTCTCTATCTTTGTGCTTCTGCAGCTACTGGTCT CATTCACCCAGCAAAAAGTGGAAGTGTTAATAGGACTTTGAATGCTCCCAATGAACAGGA GTTTAGCCTTAATGACAAAGTAATTGAGCATGATTCACATTTGTTGAGCTCTTCCACTGT AGATGAATTTGTTCAATTTATGAAGAGCAGTGCAAAAAGTGTGAGACATGATGACAATGG AATTAAAGTGAGTGAAGATGTAAGACATTATGCACTTACAAGGGGTTTTGAAATATATGA GAAAATGCTCTCAGACAAGGTACAAATTAATGAAGCAACCCTTACATCTGTTGCAAGAAT GGCAATGGCATTAGGGAATGGTGATATGGCATTTGATGTTGTAAAGAAAATGAAAGAAGA TGGAATAAACCCCAAACTACGATCGTATGCTCCTGCATTATCTGTTTTCTGCAATAACGG GGATGTCGACAAGGCATTTATAGTTGAACAACACATGTTAGAGAATGGTATCTACCCGGA GGAACTTGAGCTGGAGGCACTTCTAAAAGTAAGTATAGAAGCTGAAAGGAGTGAAAAAGT GTACTATTTGTTACATAAGCTTAGAGAAGGAGTTCGACAAGTCTCACCTTCTACTGCAGA TTTGATTGACAAGTGGTTCAACAGCAAGGTAGCTTCAAGGGTGGGAAAAAGAAAATGGGA TGTAAGATCCATACACAAAGCTATTAAAAATGGAGGTGGTGGCTGGCATGGACAAGGCTG GTTGGGTAATGGAAAGTGGACTGTATCACATGGAATCGTTGGCTCTGATGGCTGCTGCAA ATGCTGTGCCGAGAAGCTCGTGACCATTGATCTTGATCCAGAAGAAACTGAAAAGTTTGC TAAGTCAGTTGCTTCTATAGCTGCGCAGAGAGAGAGAAATTCGAGCTTCCAGAAATTTCA AAGATGGCTTGATTACTATGGACCATTTGAAGCTGTTATTGATGGTGCAAATGTTGGTCT TTACAGCCAAAGAAAGTTTAGGCCATCTAAGGTCAATGCTGTCGTCAATGGAATTCGTCA GATGCTTCCTTCAAAAAAGTGGCCGCTAATAGTTCTGCACAATAGACGTATTACTGGAGA TAAGATGGATGAACCATTCAATCGATCGTTAGTAGAGAAGTGGAAAAATGCGGATGCGAT CTATGCAACACCTACTGGGTCAAATGATGATTGGTACTGGTTGTATGCAGCTATAAAATT TCGGTGCTTGCTTGTGACCAATGATGAGATGAGGGACCATTTATTTCAACTTCTGGGAAA TGACTTTTTCCCAAAATGGAAGGAAAGGCATCAGGTGCGTTTCAGTTTCTCTGAAACAGG TCCAGTATTTCACATGCCGCCTCCATGTTCTATTGTAATTCAGGAGTCGGAAGAAGGAAA CTGGCATGTACCAATTGCCTCAGAACTTGAATCAGAAGAGGAAAGGACGTGGCTGTGCAT TAGGCGTGCCAATTCACCTATGGCACATCAAGATTCTTCCAGAGTAAACATATCCAAAAA TGTTGGTGGTCCCACTCACAAATGCCCTCCTACGTCATCAGACTCTCCTCACAACAAGGG AGATGCAAAGTCAAGCACAAGAAGGAAAAATCAAGTTAAGGTGACAGGAAAAACGCGCGG CAGCCACTGTCGGGGTAAGGATGCACCTGAAGAGATGTATAGAAGTCTTAAAAACATATT ACAACCGTCAATAACCTCAGATCATTGTTCCATTCTTCCAGAACTGAAGGCCGCAGAGGA GTTAGGGAGATGCGTAGTCGATTTCCAAATATAAACTCTTCAGTGTGGACTTTGGACCTT TTTGACACAAAAGATGGTGCAAGCAGCCTCTATTCCAGTAGGTATACCACATACTTGAAC AAGAGTTTAACTTAGATCTTTCTGCCATGTAGATTAGATAGGAGTTTTCTGTTATTAGGG AGGAAAAGAAATGGGATGGCAAGGCTTGTCTTGGGGTTCTTATTATAACAGCACTTTGTA TGATTTTTGCCAGCATTAAAAGTAGTTTTATTAGTCTTTATGGTGAATAATTTTCTTCAA CTTTTTTTTTTCTTTCTAAATATGTATGTCAGGTGCAACAAATAATTGGAATCAACATAA ACTGATTTTGGACTCGACCTGTAATGGAAGCCACTTCTTTAAAGAGGTAGCATTTGGGCT GGCCCTTGGATAAGAATTGAATTAGTTGAAACAAAAATACGAAATAATGTCGTTGCAAGT TTTTACAACTCTATTCACATGCGAGTAGTGGTTTAGGATTAGGAATGAGAATATCAGGGA TGAAGTCGGAGTAGCCTC