Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g017230.3.1
CDS Infomation

pollen receptor-like protein kinase 2
Sequence

ATGTCATCACAAAAAAACTACAAAAACAAACATGTCCTCTTCCTTGTTATGATCATGTGT
TCATTAGCATTTGTGACAGAGGCAAACTTATCAGAGCCTGAGGTTCTTCTCAAGTTTCGT
GAATCATTAAAGTACGATGGAGATCCCTTCTCGACGTGGGATGCTAATGTACCACCTTGC
GTCAAAGATAACAATAAGCCTAAATGGAACAATCTATTTTGTGAAAGCGGAAAGGTTTAT
GGTTTGAATCTTGAAAATCTTGGGTTAAGTGGTACCATTGATTTGGACATACTTAAAGAG
TTGCCAAATTTGAGAACCATAAGTGTTTTCAAAAATAAATTTGAAGGTCCATTACCAATA
TTAAATAAATTGCCTACATTAAAAAGTGCTTATTTCTCAAATAACAAGTTTTCTGGTCCA
ATTGATCAAAATATTTTTGAAGGCATGAATTCATTAAAGAAACTTCACCTAGCAAATAAT
GAATTTACAGGACCACTCCCTCCTATTTTTGGTGATATGCCAAATCTTAGGGAGTTGAAT
ATTCAAAACAATAAGTTTGAGGGTCCAATTCCTCCTTCGTATTCACATCTTTATCTTCCT
GCTTATGATGGTAATGATGGTCTTTGTGGTCCTCCTTTAGCAAAGTCATGCAATAAGGAA
GATGAAAAAAAGAAGGAAGAATCATCATCATCATCATCATCAGGTTGGAAGATTGCCCTT
ATTGTGGTTATAGTAGTTGTAGTGATAGGCATTATTGTGTTTGTTCTAATCAATCGTCGC
AACAAGAATCATCAACAAGAAGTAGTACTTGGAGGATCATCATTAACTTCTTCCTCACCA
ACAAGTCAAGACCAAAAACTAATCCCTCAATCTCATGATCATCTAAACAAAATGGAACAA
GGCCAATCATCAGCTGCATCTACTCCTGATCGCGCTTGTAATGATGGCGGTAAAAGAGCT
GAAGTTGCTGGACAAAAACTTCTATTCTTGAAAGATGACATTGAGAAATTTGACTTGCCT
GATTTGTTGAAAGCCTCTGCTGAAGTATTAGGAAGTGGAGTGTTTGGTTCAACATACAAA
GCTGCACTTAGTACTGGCCCTGTCATGGTTGTTAAGAGGTTTAGACATATGAATAAAGTT
GGTAAAGAAGATTTCCATGAACATATGAGAAGGCTTGGAAGATTGAGTCATAAGAACTTG
CTTCCTGTTATTGCTTTCTATTATAGGAAAGAGGAGAAACTTCTTGTCTTTGAGTATGTC
AACAATGTCAGCCTTGCTGTTTATCTTCATGGTAATAGCAAATCACGTGGTAACCAAAGT
CTTGATTGGCCAACTCGTTTGAAAATTGTGAAAGGAGTAAGCAAAGGAATATTATATCTT
TACAATGAGCTACCAAGCTTAACATCACCTCATGGTCACCTCAAGTCTTCAAATGTTCTT
CTAACTGAAAACTTTGAGGCAGTTCTCACAGACTATGCTTTACTACCAGTAGTAAATGCT
GAACATGCACATGAACACATGATCTCATACAAAGCACCAGAGTTGAAACAATCAGGCAAA
GTTAATAGAAAAACTGATGTTTGGACACTTGGTATGTTAATCCTTGAGATCTTGACTGGA
AAATTCCCTTCAAATCTTTTAGGCAAAGGGACACAAGATAGCGATGATTTAGCAACATGG
GTGAATACTACTCTTGGGGGTGAATCATCAGAGAAAGAAGTGTTTGATAAAGAAATGAAA
GGAACAAAAGATTGTGAGAGTGAAATGATGAAGTTGTTGAAGATTGGACTAAGTTGTTGT
GAGGCTGATGTGGAGAAGAGATGTGATATTAAAGAGGCAGTTGAAAGGATTGATGAAGTC
AAAGGGAAAGGTGATTTCAGCTCTAATGTTGCAAGTAATGAAGTTGACAATATGCATACT
TCAAGATAA

Peptide Sequence

PEP ID

Solyc07g017230.3.1
PEP Infomation

pollen receptor-like protein kinase 2
Sequence

MSSQKNYKNKHVLFLVMIMCSLAFVTEANLSEPEVLLKFRESLKYDGDPFSTWDANVPPC
VKDNNKPKWNNLFCESGKVYGLNLENLGLSGTIDLDILKELPNLRTISVFKNKFEGPLPI
LNKLPTLKSAYFSNNKFSGPIDQNIFEGMNSLKKLHLANNEFTGPLPPIFGDMPNLRELN
IQNNKFEGPIPPSYSHLYLPAYDGNDGLCGPPLAKSCNKEDEKKKEESSSSSSSGWKIAL
IVVIVVVVIGIIVFVLINRRNKNHQQEVVLGGSSLTSSSPTSQDQKLIPQSHDHLNKMEQ
GQSSAASTPDRACNDGGKRAEVAGQKLLFLKDDIEKFDLPDLLKASAEVLGSGVFGSTYK
AALSTGPVMVVKRFRHMNKVGKEDFHEHMRRLGRLSHKNLLPVIAFYYRKEEKLLVFEYV
NNVSLAVYLHGNSKSRGNQSLDWPTRLKIVKGVSKGILYLYNELPSLTSPHGHLKSSNVL
LTENFEAVLTDYALLPVVNAEHAHEHMISYKAPELKQSGKVNRKTDVWTLGMLILEILTG
KFPSNLLGKGTQDSDDLATWVNTTLGGESSEKEVFDKEMKGTKDCESEMMKLLKIGLSCC
EADVEKRCDIKEAVERIDEVKGKGDFSSNVASNEVDNMHTSR*

Transcript Sequence

Transcript ID

Solyc07g017230.3.1
Transcript Infomation

pollen receptor-like protein kinase 2
Sequence

AACTAACTCTCAAAACTTGTTGTCTTGTCTTTGTCCTGTATGCAAAAAAAAATAATATTC
TTTCTCCCACCTTTCTTTTGGCTTCAAAACTACATAAAAAGGTATCATTCTTTCATTTGT
AGGAGCCCTTTGAGAGGGCGCGCACCTGCAAGTGCGCGCACCAAGAAAAAAGAAAGAAAA
AAACAAAAAAAAGTTTTTAAGAAATAAAGAAGACTGACTCTCTTCTCTATGCAATCATGT
CATCACAAAAAAACTACAAAAACAAACATGTCCTCTTCCTTGTTATGATCATGTGTTCAT
TAGCATTTGTGACAGAGGCAAACTTATCAGAGCCTGAGGTTCTTCTCAAGTTTCGTGAAT
CATTAAAGTACGATGGAGATCCCTTCTCGACGTGGGATGCTAATGTACCACCTTGCGTCA
AAGATAACAATAAGCCTAAATGGAACAATCTATTTTGTGAAAGCGGAAAGGTTTATGGTT
TGAATCTTGAAAATCTTGGGTTAAGTGGTACCATTGATTTGGACATACTTAAAGAGTTGC
CAAATTTGAGAACCATAAGTGTTTTCAAAAATAAATTTGAAGGTCCATTACCAATATTAA
ATAAATTGCCTACATTAAAAAGTGCTTATTTCTCAAATAACAAGTTTTCTGGTCCAATTG
ATCAAAATATTTTTGAAGGCATGAATTCATTAAAGAAACTTCACCTAGCAAATAATGAAT
TTACAGGACCACTCCCTCCTATTTTTGGTGATATGCCAAATCTTAGGGAGTTGAATATTC
AAAACAATAAGTTTGAGGGTCCAATTCCTCCTTCGTATTCACATCTTTATCTTCCTGCTT
ATGATGGTAATGATGGTCTTTGTGGTCCTCCTTTAGCAAAGTCATGCAATAAGGAAGATG
AAAAAAAGAAGGAAGAATCATCATCATCATCATCATCAGGTTGGAAGATTGCCCTTATTG
TGGTTATAGTAGTTGTAGTGATAGGCATTATTGTGTTTGTTCTAATCAATCGTCGCAACA
AGAATCATCAACAAGAAGTAGTACTTGGAGGATCATCATTAACTTCTTCCTCACCAACAA
GTCAAGACCAAAAACTAATCCCTCAATCTCATGATCATCTAAACAAAATGGAACAAGGCC
AATCATCAGCTGCATCTACTCCTGATCGCGCTTGTAATGATGGCGGTAAAAGAGCTGAAG
TTGCTGGACAAAAACTTCTATTCTTGAAAGATGACATTGAGAAATTTGACTTGCCTGATT
TGTTGAAAGCCTCTGCTGAAGTATTAGGAAGTGGAGTGTTTGGTTCAACATACAAAGCTG
CACTTAGTACTGGCCCTGTCATGGTTGTTAAGAGGTTTAGACATATGAATAAAGTTGGTA
AAGAAGATTTCCATGAACATATGAGAAGGCTTGGAAGATTGAGTCATAAGAACTTGCTTC
CTGTTATTGCTTTCTATTATAGGAAAGAGGAGAAACTTCTTGTCTTTGAGTATGTCAACA
ATGTCAGCCTTGCTGTTTATCTTCATGGTAATAGCAAATCACGTGGTAACCAAAGTCTTG
ATTGGCCAACTCGTTTGAAAATTGTGAAAGGAGTAAGCAAAGGAATATTATATCTTTACA
ATGAGCTACCAAGCTTAACATCACCTCATGGTCACCTCAAGTCTTCAAATGTTCTTCTAA
CTGAAAACTTTGAGGCAGTTCTCACAGACTATGCTTTACTACCAGTAGTAAATGCTGAAC
ATGCACATGAACACATGATCTCATACAAAGCACCAGAGTTGAAACAATCAGGCAAAGTTA
ATAGAAAAACTGATGTTTGGACACTTGGTATGTTAATCCTTGAGATCTTGACTGGAAAAT
TCCCTTCAAATCTTTTAGGCAAAGGGACACAAGATAGCGATGATTTAGCAACATGGGTGA
ATACTACTCTTGGGGGTGAATCATCAGAGAAAGAAGTGTTTGATAAAGAAATGAAAGGAA
CAAAAGATTGTGAGAGTGAAATGATGAAGTTGTTGAAGATTGGACTAAGTTGTTGTGAGG
CTGATGTGGAGAAGAGATGTGATATTAAAGAGGCAGTTGAAAGGATTGATGAAGTCAAAG
GGAAAGGTGATTTCAGCTCTAATGTTGCAAGTAATGAAGTTGACAATATGCATACTTCAA
GATAAAAAATATATTTTTGATTGATAAGCTCATGATCATAATATGGAAGTTTTGATTATA
TTGGATGCATATTGCATGACTATATATACTTTGGGTATATGATTTTTTTTTTGTCATGGT
GGAGGATAAATTGAACCATGATGTGGGGTTACTACAAAACAAAAAATGAAAAAAAAAGAA
AAATAAGTGATAGAAAAATGAAGTTACTTAATTTTTGTTTGCATATTGTAAATTTGTCCT
TTATGAATCTATAGTCTAGGTGTGTTTTTTTTATTTTTTATTATTATTCATTCATCAAAC
TTATTTGGGACTATTGCTTTGCATAATTGACATCTATAAATAAATAAAAACTATATTATG
TTTGTACCTAAGAAATTGGGATGACTTCTCATTCATCTTTTTATTCATTTAGGCAACCTA
ATTAAGCACTTCAAATTATTAACATTAGGTTGCCTCATTGAAGATTTTTCTATCTCCTTT
GCTTTTATTTGTCGAACCAACATACGAATCATTATATAAATCTATTGAAATTATACCAAA
CTTTTAGGTATGAGAAAATAAATGAGTTATTCCATTTGGAGTTTACTTGATCACTCCCAA
CTATGTTCTACTAAACAAAGTGATAGCTACAAACACTACTTATTGTCATAGACATGAGGT
GCTATAATATCGCCCTTTATGGTCATTCCTCGTGAACTGAATAGTAAACTCAATTTACTT
CTTGAAATGAACTTCTTTTGAGATAAAAACCGTTAGAAGGAAAACAAAGGTATAGACATT
ATGAGGGAAATAATACACTCAAATAGAAGCATTAGTGCTGAATTTAAAACGAGAGAAG