Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g008540.3.1
CDS Infomation

chloroplast import apparatus 2 (AHRD V3.3 *** AT5G57180.2)
Sequence

ATGTCATCCTGTTTAGCTGGTGGTAGAGCAGCTTATAAATTAGATTTAGAGATTATAAAG
TCTCCATCTACTTCGTGGATCTCCCAATCATCTTCGCCATCTTCAACATTATCTGAATCG
AGCAATTCTCCCATTGCAATCTCTACTAGAAAACCTCGAACACCTCGAAAAAGACCTAAT
CAAACCTACAATGAAGCTGCTGCTCTGTTATCAACAGTTTATCCCAAAATTTTCTCAAAA
AAACACCTCACTAAGCCTTGCAAATTCACTAAACCACATTACCCCTTTTCATATGACTCC
TCAGACCTTGTTGTCCCTTACCAAATTGTCGAAAATTCGGGGTTTTTGCTTCATCCTCCA
TTGATTGAAAAACCTGATTGTGTCGTAATTGAGCATAAATCTGTTAGTTCTTGTGAAAAA
CCATGCCTGAGTCCTGGAGAAATCGACTCTAAAGGGAGTGGTTCGATAGATGTGTGTGAA
GAATTTCATGAAGATTTCGATGCTGAATCGATTTTAGATGAGGAAATTGAAGAAGGTGTT
ATTGATAATATCATGGGAAAGATAAGAGATGAGAATGAACTCAAGAATGAGTCGATATTT
AGTTATAGTTATAGTCATAGCAAGCGCCACCAGAATAATTCTGGTGGCACTTGCTATGGT
TTTCCAATAGGATTAGGATTCGAAAATGGGTACCAATATTATGATTTTGGTACAATGAGA
GGTGGGGTGAGACCATTGAGAAATGTTGATGATGGTGATAATTGGTGGAGGTATACTTCT
AGTGTAAACGTTACCGACATTACTCCGAAATTTAATAAACCTCCTATCGAAAAGAAGAAA
AAGAAAGTTGAGAGACTCGTGGAGATGAGAGTGGGCGCGGAGACATCATCAGCTAAAGAT
AATTCGATTACAAGGAAGAAGAATAAGGAGAATTCAAATCATTCGATTAAGGAAGAGGTA
ATCGATGTTCCTAAACCAAAATCAGGGTTGTTACTAAAATTGAACTTTGATGATGTTTTG
AACGCGTGGTCCGATAAGGAATCACCGTTCTCCGATGATATTCAGGGTTCAGATGCTGCA
GGAAATGATGTACAAGCCAGATTAGCACAAATAGACTTATTCTCAGAAAATGGAGGAATT
AGAGAGGCTAGTGTGTTACGTTACAAAGAAAAACGACGTACTCGATTATTTTCTAAAAAA
ATTAGATACCAAGTTAGAAAAGTCAACGCGGATCGACGACCCAGAATGAAGGGTAGGTTT
GTCAAAAGCCCAAATTCACCAGAGGATGAGCTAGGATGA

Peptide Sequence

PEP ID

Solyc07g008540.3.1
PEP Infomation

chloroplast import apparatus 2 (AHRD V3.3 *** AT5G57180.2)
Sequence

MSSCLAGGRAAYKLDLEIIKSPSTSWISQSSSPSSTLSESSNSPIAISTRKPRTPRKRPN
QTYNEAAALLSTVYPKIFSKKHLTKPCKFTKPHYPFSYDSSDLVVPYQIVENSGFLLHPP
LIEKPDCVVIEHKSVSSCEKPCLSPGEIDSKGSGSIDVCEEFHEDFDAESILDEEIEEGV
IDNIMGKIRDENELKNESIFSYSYSHSKRHQNNSGGTCYGFPIGLGFENGYQYYDFGTMR
GGVRPLRNVDDGDNWWRYTSSVNVTDITPKFNKPPIEKKKKKVERLVEMRVGAETSSAKD
NSITRKKNKENSNHSIKEEVIDVPKPKSGLLLKLNFDDVLNAWSDKESPFSDDIQGSDAA
GNDVQARLAQIDLFSENGGIREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRF
VKSPNSPEDELG*

Transcript Sequence

Transcript ID

Solyc07g008540.3.1
Transcript Infomation

chloroplast import apparatus 2 (AHRD V3.3 *** AT5G57180.2)
Sequence

TTTTTGTTATATTTATATATATATATGCCAAACCCCAAAACCCTTGTGAATTCCTTTATT
TAAATACCCCTTTTCCCATTCTTAGATATTTCTTGAATTCAGTGCTTTCATCTTCTTGCC
CAACTATAATTCTCCCTTCTTCTTGTTTAAGGTTAGATTCTCTTGGGATTAGTTACTTCA
TTTGTCTAATTTGTCAAAATTCTTTCTTATGTTTTTGGTAGGTTATTGCTACTAGGAAAG
TTGCTTGACTCATTTATTTGATAAATCTTAACTGTATAACAGTATTTCGAAAAAGTTTGG
TTTATAGTGTGAAAATGAGTAATTTTATTTTTCACTCTTTTTTTTAGGGTTTTAGTACCA
AATGATTGGGTTTTGAAATTTTTCTTCTCTGTTTTGTTTCTCTGTTTATTTGATATTTGA
AAGTAGAAAAAGAAAAATGTCATCCTGTTTAGCTGGTGGTAGAGCAGCTTATAAATTAGA
TTTAGAGATTATAAAGTCTCCATCTACTTCGTGGATCTCCCAATCATCTTCGCCATCTTC
AACATTATCTGAATCGAGCAATTCTCCCATTGCAATCTCTACTAGAAAACCTCGAACACC
TCGAAAAAGACCTAATCAAACCTACAATGAAGCTGCTGCTCTGTTATCAACAGTTTATCC
CAAAATTTTCTCAAAAAAACACCTCACTAAGCCTTGCAAATTCACTAAACCACATTACCC
CTTTTCATATGACTCCTCAGACCTTGTTGTCCCTTACCAAATTGTCGAAAATTCGGGGTT
TTTGCTTCATCCTCCATTGATTGAAAAACCTGATTGTGTCGTAATTGAGCATAAATCTGT
TAGTTCTTGTGAAAAACCATGCCTGAGTCCTGGAGAAATCGACTCTAAAGGGAGTGGTTC
GATAGATGTGTGTGAAGAATTTCATGAAGATTTCGATGCTGAATCGATTTTAGATGAGGA
AATTGAAGAAGGTGTTATTGATAATATCATGGGAAAGATAAGAGATGAGAATGAACTCAA
GAATGAGTCGATATTTAGTTATAGTTATAGTCATAGCAAGCGCCACCAGAATAATTCTGG
TGGCACTTGCTATGGTTTTCCAATAGGATTAGGATTCGAAAATGGGTACCAATATTATGA
TTTTGGTACAATGAGAGGTGGGGTGAGACCATTGAGAAATGTTGATGATGGTGATAATTG
GTGGAGGTATACTTCTAGTGTAAACGTTACCGACATTACTCCGAAATTTAATAAACCTCC
TATCGAAAAGAAGAAAAAGAAAGTTGAGAGACTCGTGGAGATGAGAGTGGGCGCGGAGAC
ATCATCAGCTAAAGATAATTCGATTACAAGGAAGAAGAATAAGGAGAATTCAAATCATTC
GATTAAGGAAGAGGTAATCGATGTTCCTAAACCAAAATCAGGGTTGTTACTAAAATTGAA
CTTTGATGATGTTTTGAACGCGTGGTCCGATAAGGAATCACCGTTCTCCGATGATATTCA
GGGTTCAGATGCTGCAGGAAATGATGTACAAGCCAGATTAGCACAAATAGACTTATTCTC
AGAAAATGGAGGAATTAGAGAGGCTAGTGTGTTACGTTACAAAGAAAAACGACGTACTCG
ATTATTTTCTAAAAAAATTAGATACCAAGTTAGAAAAGTCAACGCGGATCGACGACCCAG
AATGAAGGGTAGGTTTGTCAAAAGCCCAAATTCACCAGAGGATGAGCTAGGATGATTTTT
CTAAAATTATTAGAATTTTTTTGGGTATTTGCAATTTTGTTTCTTCTATTTCATTGTTCT
TTTTTCTTTTTTTAAAAAGTTATTCTTCCTTTTTATATTTAGAATAAAGTACCAAGGAAG
ATAGACTAGTAGAGAACAAGGAATATCAAGCAGAATAGTTACATTTCTATTTCTCATTTT
ATGTTTTGTTCCTTTTTTCTTTTTTTCATTTTTCTTGTTAATTGTACCAAACTTATTATC
TTAGCGCGGTTAGAAGGACAGTTAGAAGTAGGAAATATGTTGATACTGAACAATTATGTA
TAATTCTCCTTCACTTCAAGACCACTCATCTTGTTGCATCGAGCCAAAGCAGATACTGTG
AAGAGTCCCACATCGACCCTTTTCCGTAGTAAAGTAAAATTCCTCGATGAGATATTTTTT
TCGATAAGTTGTATGAATTCAAGAGGACCCTAAGGGCCTGTTTGGCCATAGATTCCACAA
AT