Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g008300.2.1
CDS Infomation	Choline monooxygenase (AHRD V3.3 *** D2DEK9_LYCBA)
Sequence	ATGGCAATGGTGCAGAACTTGAGTTCCTTCAATCAATCCATAAAAATAACTCCACTAAAG ATTCACATTTTCACTTGTTCTGTAAAACCCAGAAGACATTATCATTCATCTCAAATCTCA TGTAATTATTATCGAAAATTGGTTTTAGAATTTGATCCCAAAATCCCAATTGAAGAAGCT ATCACCCCACCAAGTTCTTGGTACACTGATTCTTGTTTTCACACTCATGAACTCAATCAA GTCTTCTTCAAAGGCTGGCAATCTGTTGGCTACGCTGGACAGATCAAAGATCCCGGGCAA TATTTCACTGGAAGATTGGGCAACGTTGAGTATGTTGTATGTCGAGATGATGCTGGAAAC ATACGTGCTTTTCATAATGTATGTCGCCATCGTGCCTCTCCTCTTGCTTCAGCAAGTGGG AAAAAATCTTGCTTTGTTTGTCCATACCATGGATGGACGTATGGATTGGATGGAGCACTT CAAAAGGCAACTCGAATAACAGGAATCAAGAACTTCAGAGTGAATGAGATGGGACTAGTC CCAGTGAGAGTAGCTGTATGGGGACCATTCATACTTCTCAACTTCGAAAATGGAGTTTTG CCCGAAAATGAAGCTGATTTTGACTTGGTTGGAAATGAATGGCTAGGTAATTCATCCCAA ATCTTGATTGATGGTGGAGTAGATTCTTCGTTGAGTTTTTTATGCAGACGTGAATACACC GTTGAGTGTAACTGGAAGGTCTACTGTGACAACTACTTGGATGGTGGTTATCATGTACCG TATGTTCATAAAAGCTATGCTTCGGTTTTGAAACTCGACTCCTACTCCACCACTATACTT GAGAAAGTCAGCATCCAACGATGTGATGCAGAAAACGACCTAGATTTTGATCGAATTGGA TCAAAACCAGCGTTATATGCATTCGTGTATCCCAACTTCATAATAAGTAGGTATGGTCCT TGGATGGACACGAATCTTGTACTGCCTCAAGGACCTCGAAAATGTCTAGTGATATTCGAC TACTTTCTTGATTCATCTCACAAGAGTGATGAGAGTTTTATCGCACAGAGTCTCGAGGAT AGTGAGACAGTGCAGATTGAGGATATGAAGTTATGTGAAGCTGTTCAAAGAGGCCTTGAA TCACCTGCATACTGCTCTGGCCGTTATGTGCCACAAGTTGAGAAGGCTGTGCATCATTTT CACAGCCTTTTATATGAAAGATACACTGAACAGATCAAAGAGCCTAGGCAATATTTTACT GGAAGATTGGGGAATGTCGAGTATGTTGTATGTCGAGATGATGGTGGAAAAATACATGCT TTTCACAATGTTTGTCGGCATCATGCCTCTCTTCTTGCCTCAGGAAGTGGGAAAAGCTCT TGCTTTGTTTGTCCATACCATGGATGGACTTATGGATTGGATGGCGCACTTCTAAAGGCA ACACGAATAACAGGAATCAAGAACTTCAAAGTGAATGAGATGGGACTAATCCCAATGAGA GTAGCTGTATGGGGACCATTCATACTTCTCAATTTCGAAAACGGTGTTTTGCCTGAACAA GAATCCGATTTTGACTTGGTTGGAAACGAATGGTTGGGTAGTTCATCCCAAATCTTGGCC GATGGTGGAGTGGATGCTTCATTGAGCTTTTTATGCAGACGTGAATATGCCATTGACTGT AACTGGAAGGTCTTTTGTGACAATTATTTGGATGGTGGTTATCATGTACCATACGCTCAT AAAGGTCTAGCTTCGGGTCTGACACTTGAGTCGTACTCAACCACTATATTTGAGAAAGTC AGCATCCAACGATGTGAAACTGGTAGTGCGGGGAAGGACCAAGATTTTCATCGACTTGGA TCAAAAGCTTTATATGCATTCGTGTATCCCAACTTCATGATCAACAGGTACGGTCCTTGG ATGGACACGAATCTCGTACTGCCTCAAGGGCCTCGGAAATGTCTAGTGATATTCGACTAC TTTCTTGATTCATCTGTCAAGGTAAACGTTTGTTTTTCTTATCTCAACGATAAATGTATT AGTTTGAGCAATTTCATCTTCTCTGTTCACAGGGTGATGAGAGTTTTATTGCCCAGGGTC TCAAGGATAGCGAGACAGTACAGGTACAGTAAAAACATGCATGATTTGATCGTCACATCA ATTGCATATATACGATACAATTTTTGTATGTTTTCATACGCGCTCACTCATTATAACATT GCTGATTACAATGAACAGATGGAGGATATAAAGTTATGTGAAGGTGTTCAAAGAGGGCTT GAATCACCGGCTTACTGCTCTGGCCGCTACGCGCCACAAGTTGAGAAGGCTATGCATCAT TTTCACAGCCTTCTATATGAAAACCTTTCGGATTGA

Peptide Sequence

PEP ID	Solyc07g008300.2.1
PEP Infomation	Choline monooxygenase (AHRD V3.3 *** D2DEK9_LYCBA)
Sequence	MAMVQNLSSFNQSIKITPLKIHIFTCSVKPRRHYHSSQISCNYYRKLVLEFDPKIPIEEA ITPPSSWYTDSCFHTHELNQVFFKGWQSVGYAGQIKDPGQYFTGRLGNVEYVVCRDDAGN IRAFHNVCRHRASPLASASGKKSCFVCPYHGWTYGLDGALQKATRITGIKNFRVNEMGLV PVRVAVWGPFILLNFENGVLPENEADFDLVGNEWLGNSSQILIDGGVDSSLSFLCRREYT VECNWKVYCDNYLDGGYHVPYVHKSYASVLKLDSYSTTILEKVSIQRCDAENDLDFDRIG SKPALYAFVYPNFIISRYGPWMDTNLVLPQGPRKCLVIFDYFLDSSHKSDESFIAQSLED SETVQIEDMKLCEAVQRGLESPAYCSGRYVPQVEKAVHHFHSLLYERYTEQIKEPRQYFT GRLGNVEYVVCRDDGGKIHAFHNVCRHHASLLASGSGKSSCFVCPYHGWTYGLDGALLKA TRITGIKNFKVNEMGLIPMRVAVWGPFILLNFENGVLPEQESDFDLVGNEWLGSSSQILA DGGVDASLSFLCRREYAIDCNWKVFCDNYLDGGYHVPYAHKGLASGLTLESYSTTIFEKV SIQRCETGSAGKDQDFHRLGSKALYAFVYPNFMINRYGPWMDTNLVLPQGPRKCLVIFDY FLDSSVKVNVCFSYLNDKCISLSNFIFSVHRVMRVLLPRVSRIARQYRYSKNMHDLIVTS IAYIRYNFCMFSYALTHYNIADYNEQMEDIKLCEGVQRGLESPAYCSGRYAPQVEKAMHH FHSLLYENLSD*

Transcript Sequence

Transcript ID	Solyc07g008300.2.1
Transcript Infomation	Choline monooxygenase (AHRD V3.3 *** D2DEK9_LYCBA)
Sequence	GATAGGTAGTAGTGACAACATTTTTCATTCATTTGTATCATGGCAATGGTGCAGAACTTG AGTTCCTTCAATCAATCCATAAAAATAACTCCACTAAAGATTCACATTTTCACTTGTTCT GTAAAACCCAGAAGACATTATCATTCATCTCAAATCTCATGTAATTATTATCGAAAATTG GTTTTAGAATTTGATCCCAAAATCCCAATTGAAGAAGCTATCACCCCACCAAGTTCTTGG TACACTGATTCTTGTTTTCACACTCATGAACTCAATCAAGTCTTCTTCAAAGGCTGGCAA TCTGTTGGCTACGCTGGACAGATCAAAGATCCCGGGCAATATTTCACTGGAAGATTGGGC AACGTTGAGTATGTTGTATGTCGAGATGATGCTGGAAACATACGTGCTTTTCATAATGTA TGTCGCCATCGTGCCTCTCCTCTTGCTTCAGCAAGTGGGAAAAAATCTTGCTTTGTTTGT CCATACCATGGATGGACGTATGGATTGGATGGAGCACTTCAAAAGGCAACTCGAATAACA GGAATCAAGAACTTCAGAGTGAATGAGATGGGACTAGTCCCAGTGAGAGTAGCTGTATGG GGACCATTCATACTTCTCAACTTCGAAAATGGAGTTTTGCCCGAAAATGAAGCTGATTTT GACTTGGTTGGAAATGAATGGCTAGGTAATTCATCCCAAATCTTGATTGATGGTGGAGTA GATTCTTCGTTGAGTTTTTTATGCAGACGTGAATACACCGTTGAGTGTAACTGGAAGGTC TACTGTGACAACTACTTGGATGGTGGTTATCATGTACCGTATGTTCATAAAAGCTATGCT TCGGTTTTGAAACTCGACTCCTACTCCACCACTATACTTGAGAAAGTCAGCATCCAACGA TGTGATGCAGAAAACGACCTAGATTTTGATCGAATTGGATCAAAACCAGCGTTATATGCA TTCGTGTATCCCAACTTCATAATAAGTAGGTATGGTCCTTGGATGGACACGAATCTTGTA CTGCCTCAAGGACCTCGAAAATGTCTAGTGATATTCGACTACTTTCTTGATTCATCTCAC AAGAGTGATGAGAGTTTTATCGCACAGAGTCTCGAGGATAGTGAGACAGTGCAGATTGAG GATATGAAGTTATGTGAAGCTGTTCAAAGAGGCCTTGAATCACCTGCATACTGCTCTGGC CGTTATGTGCCACAAGTTGAGAAGGCTGTGCATCATTTTCACAGCCTTTTATATGAAAGA TACACTGAACAGATCAAAGAGCCTAGGCAATATTTTACTGGAAGATTGGGGAATGTCGAG TATGTTGTATGTCGAGATGATGGTGGAAAAATACATGCTTTTCACAATGTTTGTCGGCAT CATGCCTCTCTTCTTGCCTCAGGAAGTGGGAAAAGCTCTTGCTTTGTTTGTCCATACCAT GGATGGACTTATGGATTGGATGGCGCACTTCTAAAGGCAACACGAATAACAGGAATCAAG AACTTCAAAGTGAATGAGATGGGACTAATCCCAATGAGAGTAGCTGTATGGGGACCATTC ATACTTCTCAATTTCGAAAACGGTGTTTTGCCTGAACAAGAATCCGATTTTGACTTGGTT GGAAACGAATGGTTGGGTAGTTCATCCCAAATCTTGGCCGATGGTGGAGTGGATGCTTCA TTGAGCTTTTTATGCAGACGTGAATATGCCATTGACTGTAACTGGAAGGTCTTTTGTGAC AATTATTTGGATGGTGGTTATCATGTACCATACGCTCATAAAGGTCTAGCTTCGGGTCTG ACACTTGAGTCGTACTCAACCACTATATTTGAGAAAGTCAGCATCCAACGATGTGAAACT GGTAGTGCGGGGAAGGACCAAGATTTTCATCGACTTGGATCAAAAGCTTTATATGCATTC GTGTATCCCAACTTCATGATCAACAGGTACGGTCCTTGGATGGACACGAATCTCGTACTG CCTCAAGGGCCTCGGAAATGTCTAGTGATATTCGACTACTTTCTTGATTCATCTGTCAAG GTAAACGTTTGTTTTTCTTATCTCAACGATAAATGTATTAGTTTGAGCAATTTCATCTTC TCTGTTCACAGGGTGATGAGAGTTTTATTGCCCAGGGTCTCAAGGATAGCGAGACAGTAC AGGTACAGTAAAAACATGCATGATTTGATCGTCACATCAATTGCATATATACGATACAAT TTTTGTATGTTTTCATACGCGCTCACTCATTATAACATTGCTGATTACAATGAACAGATG GAGGATATAAAGTTATGTGAAGGTGTTCAAAGAGGGCTTGAATCACCGGCTTACTGCTCT GGCCGCTACGCGCCACAAGTTGAGAAGGCTATGCATCATTTTCACAGCCTTCTATATGAA AACCTTTCGGATTGA