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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g008290.3.1
CDS Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT3G21190.1)
Sequence

ATGCTTATAATGCTTTGCAATATGGTTAAAAGAGATCATTTTGATCCTATTTATGTGGAA
AATCTTTCAGTGCAATATGATTTGGTAAAAGTTTCAAAGCAAAGTCTTGTTAAACTCTCA
GACAAAGGAGGGATTTGGAGGGAAAATTTTTCCCTTAAACCTTGTTGGAGGAAGCCATTA
TCAACAACAAATGAAGAACAGGGCAAAGGCTACATCTTTTTTAATTTAACAGACAACCCT
GAAGATCATATTACACAGATTGCTAATGCAGTAGTTGTGGCCAAATATGTTGGGGCAACT
CTAGTCCTTCCTGAAATAAGAGGAAGCCAAACAGGGCATAAGAGGCAATTTGGTGATATT
TATGACATAGAGAGATTCATGACAAGTTTAGATGGCACAATTCAAGTAGTGAAAGATCCA
CCAATGGAAGCATCAAAAGTGAACATCACAAACATAAAGGTGCCTTTCATTGTGACCAAA
GACTTCATTGAATCCAAAATTAAGCCACTATTCAAAGCCAAAGGAAACTTAATGCTTACA
ACAAACTTGTCACCTTCAACTATGTCAAAAGCTAAAGAGATCATTAGAAAAGACAATATA
AAGATGGACCCTAATGCATGCTTAGCAATATTTGGGAGCCTTGAGTTACAACAAGAGTTA
AATCAATTGGTTAGCTCAATGATTGGGACATTAAGAAGTTTGAGCTATAAAACAAATGGA
CAATTTGTTGCTATGGACTTAAAGGTTGAATCATTGGGAAATTTGTGCAAAGGGAATGTG
ATTAAAACAAAGGATTGTTTTGAGGCCAAAGACATTGGTGAGTTCTTGAAGAAGATTGGT
TATCAAAGGCACACTACTATTTACTTGACTCAAAGTGGATGGCATAGCAGTCTTGATGAT
TTCAGAAAGATCTTCCCCAACACATTCACCAAGGATGCTATAATTCCAGCATATGAGAAG
GCTAAGTACCAAATCACAAAAAGTTCTGATTTTGAGAAAGTGATTGACTTCCAAGTATGC
ACACAAGCTGATGTATTTGTACCAACAATCTCCAATCTATTCTACACTAATGTTGTAGCA
AAGAGGATTGCCTCTGGTAAGACAGAGGTACTTGATCCTACACAAAAGGATTCTACTTCA
TCTTCTATTGTCAACTATGTCTCTCCATACATATCCAAGAAATCACATTGGGCTTATTCA
TGCTTTTGTTGA

Peptide Sequence

PEP ID

Solyc07g008290.3.1
PEP Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT3G21190.1)
Sequence

MLIMLCNMVKRDHFDPIYVENLSVQYDLVKVSKQSLVKLSDKGGIWRENFSLKPCWRKPL
STTNEEQGKGYIFFNLTDNPEDHITQIANAVVVAKYVGATLVLPEIRGSQTGHKRQFGDI
YDIERFMTSLDGTIQVVKDPPMEASKVNITNIKVPFIVTKDFIESKIKPLFKAKGNLMLT
TNLSPSTMSKAKEIIRKDNIKMDPNACLAIFGSLELQQELNQLVSSMIGTLRSLSYKTNG
QFVAMDLKVESLGNLCKGNVIKTKDCFEAKDIGEFLKKIGYQRHTTIYLTQSGWHSSLDD
FRKIFPNTFTKDAIIPAYEKAKYQITKSSDFEKVIDFQVCTQADVFVPTISNLFYTNVVA
KRIASGKTEVLDPTQKDSTSSSIVNYVSPYISKKSHWAYSCFC*

Transcript Sequence

Transcript ID

Solyc07g008290.3.1
Transcript Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT3G21190.1)
Sequence

AAATGGCAAGAGATGTAAGGCAAGTGGTGGCTGGTTTATTAACAGGTTCAATGCTTATAA
TGCTTTGCAATATGGTTAAAAGAGATCATTTTGATCCTATTTATGTGGAAAATCTTTCAG
TGCAATATGATTTGGTAAAAGTTTCAAAGCAAAGTCTTGTTAAACTCTCAGACAAAGGAG
GGATTTGGAGGGAAAATTTTTCCCTTAAACCTTGTTGGAGGAAGCCATTATCAACAACAA
ATGAAGAACAGGGCAAAGGCTACATCTTTTTTAATTTAACAGACAACCCTGAAGATCATA
TTACACAGATTGCTAATGCAGTAGTTGTGGCCAAATATGTTGGGGCAACTCTAGTCCTTC
CTGAAATAAGAGGAAGCCAAACAGGGCATAAGAGGCAATTTGGTGATATTTATGACATAG
AGAGATTCATGACAAGTTTAGATGGCACAATTCAAGTAGTGAAAGATCCACCAATGGAAG
CATCAAAAGTGAACATCACAAACATAAAGGTGCCTTTCATTGTGACCAAAGACTTCATTG
AATCCAAAATTAAGCCACTATTCAAAGCCAAAGGAAACTTAATGCTTACAACAAACTTGT
CACCTTCAACTATGTCAAAAGCTAAAGAGATCATTAGAAAAGACAATATAAAGATGGACC
CTAATGCATGCTTAGCAATATTTGGGAGCCTTGAGTTACAACAAGAGTTAAATCAATTGG
TTAGCTCAATGATTGGGACATTAAGAAGTTTGAGCTATAAAACAAATGGACAATTTGTTG
CTATGGACTTAAAGGTTGAATCATTGGGAAATTTGTGCAAAGGGAATGTGATTAAAACAA
AGGATTGTTTTGAGGCCAAAGACATTGGTGAGTTCTTGAAGAAGATTGGTTATCAAAGGC
ACACTACTATTTACTTGACTCAAAGTGGATGGCATAGCAGTCTTGATGATTTCAGAAAGA
TCTTCCCCAACACATTCACCAAGGATGCTATAATTCCAGCATATGAGAAGGCTAAGTACC
AAATCACAAAAAGTTCTGATTTTGAGAAAGTGATTGACTTCCAAGTATGCACACAAGCTG
ATGTATTTGTACCAACAATCTCCAATCTATTCTACACTAATGTTGTAGCAAAGAGGATTG
CCTCTGGTAAGACAGAGGTACTTGATCCTACACAAAAGGATTCTACTTCATCTTCTATTG
TCAACTATGTCTCTCCATACATATCCAAGAAATCACATTGGGCTTATTCATGCTTTTGTT
GAATCATCATCAATCATAAATAAGTGTAAGCAAATTGTGTCTACTTTTATTTTAATGTCA
ACATGTGTGAGAGTAGTAGTAATAAATAAAGTTCATATAGTAGCTACTAGAAGTATGTTT
AGCAATTGTATACTATCTTGTAGTTTTGATTTTTGAATGTCTTGTCTATAAGTACCTATT
AAATTGTTTGAATTATACCAAAATGTATGTTGAGTGTTATATTTTTTTTGTGTGTGTAAA
TGGGGATGAATAGGAAATGAAAGGACTTTGTATATATCGATGAGTTTAAGTAAATCTATT
TTGACTA