Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g007960.3.1
CDS Infomation

Ubiquitin system component Cue protein (AHRD V3.3 *** AT5G32440.3)
Sequence

ATGTCTGCTGTGGTGTGCGGTAAGAGATCCAATTTTTTTGAAGATTTGCAGTCATCGCCG
TCTCCGCCGGTTTCGAAGAGGATCCGTTGTTCTCCGTCTTCGTTTTCTCCGTCGCGATCC
TTTACGACTCCGTCGGCGATCGATCATCTCATATCGGTGTTTCCTGATATGGACAAACAG
TTGCTGGAGAGAGCTCTGGATGAATGCGGTGATTTGGATTCTGCCATCAAAAGATTAAAT
GAGCTTTGCTTGGGGTCTGCTGAGAATTTGGGGCCCCTCCCAGGAAGATCTGATGCTACC
CAGGACATTGGCATTCCGATCTCAACTCAAGGTAATGGTGGGCCCACGCCATGCTCATCT
GCAGCAAAAGAACTGCACATGATGGAGCGTACTGAATGGGTGGAGCTGTTTGTTAGAGAG
ATGACGAGTGCCTCAAATATAGATGATGCTAAAGCCCGTGCTTCACTAGCTCTTGAGGCC
TTTGAGAAATCCATTTGTGCCCGTGCGACAGAGGCAGCAACTCGAAATTTCCAGCAGGAA
CACGTAATGCTCAAGCAGCAGGTAGAAGATCTTCTTCAGGAGAACAATATTTTGAAGCGA
GCATTTGCTGTTCAACACGAGCGTCAGAAGGAGTTTGAAGATAGAGGGAATGAGGTGAAT
CAGCTGAAGCAGATGGTGGCTCAGTATCAGGAGCAGCTGAGAACGCTTGAGGTCAATAAC
TATGCGCTGACGATGCATCTCAAGCAGGCACAACAAGGCAACTCTATCCCCGGGCGTTTC
CATCCCGACGTCTTTTAA

Peptide Sequence

PEP ID

Solyc07g007960.3.1
PEP Infomation

Ubiquitin system component Cue protein (AHRD V3.3 *** AT5G32440.3)
Sequence

MSAVVCGKRSNFFEDLQSSPSPPVSKRIRCSPSSFSPSRSFTTPSAIDHLISVFPDMDKQ
LLERALDECGDLDSAIKRLNELCLGSAENLGPLPGRSDATQDIGIPISTQGNGGPTPCSS
AAKELHMMERTEWVELFVREMTSASNIDDAKARASLALEAFEKSICARATEAATRNFQQE
HVMLKQQVEDLLQENNILKRAFAVQHERQKEFEDRGNEVNQLKQMVAQYQEQLRTLEVNN
YALTMHLKQAQQGNSIPGRFHPDVF*

Transcript Sequence

Transcript ID

Solyc07g007960.3.1
Transcript Infomation

Ubiquitin system component Cue protein (AHRD V3.3 *** AT5G32440.3)
Sequence

ACATTGGAACAATCGTAGAGAAATCTGAGATTTTGAATATTTTTTATATTTTTTTTTGTT
GTTGTTGGGAGGAATTTGAGAAAAATCTAAGTTTTTGAATTTTTTTTTTTGTTATTCTGA
GGAATTTGAGAGTTTTTTAATCTCGATTTTTGTTAAATTTTTTTTTTTGATTTTTTTTGT
TGTTTTTGGAATCTGTATGAGCGAGGCGGTGGGAGAAGAATTGTTGTTGTTGTTGCTGCT
GTTGAGAGGAATTTGATTTTTTTTTTGGCGCAACATGTCTGCTGTGGTGTGCGGTAAGAG
ATCCAATTTTTTTGAAGATTTGCAGTCATCGCCGTCTCCGCCGGTTTCGAAGAGGATCCG
TTGTTCTCCGTCTTCGTTTTCTCCGTCGCGATCCTTTACGACTCCGTCGGCGATCGATCA
TCTCATATCGGTGTTTCCTGATATGGACAAACAGTTGCTGGAGAGAGCTCTGGATGAATG
CGGTGATTTGGATTCTGCCATCAAAAGATTAAATGAGCTTTGCTTGGGGTCTGCTGAGAA
TTTGGGGCCCCTCCCAGGAAGATCTGATGCTACCCAGGACATTGGCATTCCGATCTCAAC
TCAAGGTAATGGTGGGCCCACGCCATGCTCATCTGCAGCAAAAGAACTGCACATGATGGA
GCGTACTGAATGGGTGGAGCTGTTTGTTAGAGAGATGACGAGTGCCTCAAATATAGATGA
TGCTAAAGCCCGTGCTTCACTAGCTCTTGAGGCCTTTGAGAAATCCATTTGTGCCCGTGC
GACAGAGGCAGCAACTCGAAATTTCCAGCAGGAACACGTAATGCTCAAGCAGCAGGTAGA
AGATCTTCTTCAGGAGAACAATATTTTGAAGCGAGCATTTGCTGTTCAACACGAGCGTCA
GAAGGAGTTTGAAGATAGAGGGAATGAGGTGAATCAGCTGAAGCAGATGGTGGCTCAGTA
TCAGGAGCAGCTGAGAACGCTTGAGGTCAATAACTATGCGCTGACGATGCATCTCAAGCA
GGCACAACAAGGCAACTCTATCCCCGGGCGTTTCCATCCCGACGTCTTTTAATGTGTATT
ATGTCCTCATTAATGGATAGGATAGCAATAGTCATGTCCTACCATAGCTATAAGCAACAC
ATTTTTTTGGGATGATACTTGGCCAGAATACATGTTTTGCTTAGTTGAAGCCTCCTGGTG
CTGTTATTAGCCAAAGGGTAGCTATAGTATCAAGGAAGTTATAGACATGGTTTTACTTTC
TGTTTGTACTTCAAATTAGACAATGAGTTTATACTTTTCTGGTCTTTTATTAGTGATAAG
AAACTATTTGACTTAAAATTTGCATTCTTGTTAGATTATGTTTTAATATAATAATATTCG
GCTCTGTTGCAACAACAACAATATATCCAGTGTAATTCTACAAGCGGGATATTCTGTTCT
GTTGCATATGTTAGGTAGTTGAAATGACCTCCCAATTCCAACACCTTTAAAACTTGAGAA
GTTTTTGTGTGTATTCTCAAGCGTCTATTACTACAAGTTAATTACATAAACTACGTTACC
ACCTTTGATTATAAATATTAGCTTCAATTTTGAAAGCATGAGGCTTAACAATTTGTGAAG
GGTAATGTGTATAATTGGAGGATATGACACATTTAAGTGGTTAATTTAATTACGTAATGA
GTGTTCAAGGATACATAATAGGAACACTTCATTACACTTTTTTTAGGTGTTCAGTCAAAG
CAAAAATGATCTGAGTGTTTTAATAATAAAATTTACTGACAAATTTGACGATAAATGTTC
TACTTTACCTAAGAAAATTGTGTCCTTCAAAATTTGTGCTTTTGTTTTATAAAATTATAG
TAGTTGAACATGGCCCCAATTAATTATAATAAGTGGTTTAGATTTCTTTATCATGTGTGG
GTGTTCCTAGATGTGAGATCCACATGAACACCAACTTAAACTCTTTTTTTAAACCACCAT
TATTGTAGTTTTGACTAGTACTATCTTTTCTAGGTGGTTATTATTATTATTACTATAAAT
AGCTCACATTTAGTAAAGAATAATTAGGTATTACTCATTATTTTTTCTATAACTTAAGGG
TGTATTTGTTACTCTATGTCCATATTATACCCAATT