Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g007920.2.1
CDS Infomation	Telomere-associated protein RIF1, putative (AHRD V3.3 *** A0A061GVQ3_THECC)
Sequence	ATGGAAACCTTCGAAGAGCAATTCGATCAGATAACAACTCTTTTATCATCAAACAAACTG TTGGCTTACTCGACGCTGCTTCATCTCCAGCAACAATCCGGCGCCGATCCTTCTCTCGTT AAGCTGCTCGCCGATTCATCTTCTATCATCGTTTCCTATATTATCTCCGATGTATCCGAT AACGATGAGGAAATTGCTGCTCAGGCATTGAAGTGCTTGGGATTTATGATATATCATCCA TCTATAGTTGGCTCAATTACAGGTGATGATGCCAGGGCTATTGTTGATTCTCTCGTTGAG GTTATCACAACCAGCAAGATTAAGTCTGTTTGCAACTTGGGTGTGTGGTGTATATCAATG CAGCAGTTTAACTCATTGCTTTTAGATGAAAATTTCCAGTCTTTGCTGAGGGCAATTATT TATGCCCTTGACAATCCTATTGGCTCTCTTTCAATCACATTTGAGGCAATGCAGGCTGTA ATGAAGTTGGCGAATACATCAGCTCAAAATATGAGAGCCATGTCAAACATATGGGCTCCT CCAGTTTATAAAAGGCTAGTCAGCAGCGATAAAAGGGAAAGAGATATGTCAGAGCGTTGT TTACAAAAAGTCTCTAGCGTGATATTGCCTCCACCAGTAATTCTTTCTAAGTATAGTGAT CGTGCAGATGCCCCACCCAAAATCATCGTTCTAAAGGAAGCTGCCCTTGTCACAGATTTG AAGAAGACTTTGCTTTTGACGATGGAGGAGCTGCTGAACCAAGGCTTGAAGATTCAAACT CTACAAGTATGGAGATGGTTTATGTGTCTACTCGGACCTTATGGAATGAAATATAAGCAT TTGGTCAACAAATTGCTTAAAATTCCAGAACAAACTTTTACGGACAATGATCCACAGATT CAGAGTGCTTCACTGGTGGCCTGGGAAGGTCTCATTGATTCTTTAATCTGCTCACAACTT CATGCTCCTGAAAGCAATGTACTTGTAAAGAATCCTACTGATCAAAGGGTTTTCAAAGGA AGTGATCCAACTGAAGCTGATGGATTTCCCAAAAAGATTAAACTTGTGATGACGCCCCTT GTAGGAATCATGTCAAGCAATTGTGATGCATCTGTCCATGTATCCTGCCTGAATACATGG TCTTATCTTCTGTATAAGCTCGACAAGTTAGCCAGCTTCCATTCGGTGGTTAGAACAGTT TGGGAGCCCATCTTGGAAGTCATCATCAAGGTTGGGCCTGTCAATAAGAATATATGGTCA TGGAGTTTCTGCATTGAGCTGCTTGATAATTTTATTTCAGCAGGAAATAAAGATGTAAAT AGTATGCTAAATGACCATAAGGCAATGAGACTTCCAGAATCTGCAAAATACTCATGGAAG TATTATCCAATTAAATGGTCACCTTTGGATCTTGGTAACTTGGAGTTTTTCTTAAACACA ATTCATGGTCTGATCATTCACGGGTCAGATATTACTCTGTCCGGTGAAATCAGGACAGTG ACATATGGTGCTGCCTCAAGTTTGTTTCGATCTCTTCTGAGATCTGTTAAACATTGCTTG AAGTCTGACCTTATAACTTATGACGAGGTTATCTTATCTTTGAATATGATGTTAAAGTTT TTGAAGAGTGTATATGAAAATATGCATTCAAGTGATGGTGGTATAGATGATTTGCTACCT CTTTTACTTCAGCTTTTGGAGGCTTTTGTTGAAGAATTAGAACCATCAACATTGCAATCC CCTCTTTACAAGGTGATAGTAGACTTCAAAATTTTTGAGACGTCAGAACCAGTCTATAAA TTCAAAAGTGCAAAGATACCAGATATCGGCTTTATGAATTGTATGGAGAAGGTCTCACCA GTTGCATATATCACTTTGCTCTATTTCCATGCAGTGACCAGAGCAACATTGAAAGCACCT GATTATGATATAGTTGAAGGGAAACACAGATATGTCAAGCTTTTGCTATCTTCATACGAG CCTTTGGAAATTCTGCATCTTTTTGTTAGTTTATTATATACAGAGAAGATGTCCTGTTGC TTTGAGATCTGGGTAGCTCTGGCGAATTGTCTGAAAGATTACATAGATAATCATAACTTC CGCTCACTTTTCAAATTGCAGTCGGATAGTCCTGGTTATGCTATAACAATACATTTCCTG TGTTATCCATTTGCTGCATATTCTTGCCGTAAGGTGTATCTCATGCTTCAGCATGTTATT GAAGTATGGAAATCACTTTATGTTTCTCTTAGCCGGGCATCAGAAATTGGTTATCCTACT CTAACTGAGGACCTGTTATCAATGCTCTGTTCATATTTCAATGAAGCATTGACCAATGGC AATCTTGTCCCTGAACCTCAGTCAAGTGTAAATGGTCAGGATATTGATGTTCTGTTATTG TTTGGAGAAACAATGATATGTGCCGTAGAACAAGCTTCTTTGATAGCAAAATCTGAAGTT AATGAGTCTGAAAGTTGGAGATCCAGTATTATCAAAAGTAGCTTGGATTTCACTTCCTGC TTCGTGAAGTTATCTAGGGCAAAGGGTGAAACTAATCTATCAACCAGCCTCATTGAGAGA AGGCTGCTATCATCACTGGTTCACTTTGTTGGCTGCTTGCACTTGCAGAAGGATATAGCA TTATTCATTGAGATGATGACCAGTACATTGCTTCTGTGGCTGTCACATTTTGAAGCTCAA GACAGTAACTTCAAAGATCAACTTCAACAGTTATGGATCCAGACACTGAACTGTTTGCAG AAAACGCTACCAATAATAGAATTCAATTCTTCTTTCCTTCAGCTCCAAGAGCCTCTTCTT GGGAAAACTCTTGATCATCCAGATCTCGTCATTTCCAACTTCACTGTTAACTTCTGGAAT TCTACGTTCGGGGAGCAGACCAAGTTAGACTACCCTGAAAGCTTACTTCCAGTCCTAGAC AAGCTTTCAAGGAGAGGAAAAATAAAACTCGGAAAAAACAGCCTGTTAGCCAATACTAAC GACAGATCTGATGTAGATAAAGTTACAGTTCCAAATAGACACAAGGTGCCAACAACACTG CATAGGTGCTCAAAACGAGTTGAACTCGTGGGGAATGCAGCTAATAGTTCAGAAGGAAAT GACAGAATTTATTCAAAGTCCAAACGAAGACACACTGAGCTGACCGAGCATCAAAAAGAA GTAAGAAGAGCACAACAAGGTCGATTAATGGATTGTAGCGGACATGGTCCGGGGATCAGG ACATATACCAGTGTCGATTTCTCTCAAGGAACTGAAGAATCACAAGAAAGCCAGGACATT CGTGATGCAGATACTATTTTGGAAATGTTGCGCAAAGCTAAGTAA

Peptide Sequence

PEP ID	Solyc07g007920.2.1
PEP Infomation	Telomere-associated protein RIF1, putative (AHRD V3.3 *** A0A061GVQ3_THECC)
Sequence	METFEEQFDQITTLLSSNKLLAYSTLLHLQQQSGADPSLVKLLADSSSIIVSYIISDVSD NDEEIAAQALKCLGFMIYHPSIVGSITGDDARAIVDSLVEVITTSKIKSVCNLGVWCISM QQFNSLLLDENFQSLLRAIIYALDNPIGSLSITFEAMQAVMKLANTSAQNMRAMSNIWAP PVYKRLVSSDKRERDMSERCLQKVSSVILPPPVILSKYSDRADAPPKIIVLKEAALVTDL KKTLLLTMEELLNQGLKIQTLQVWRWFMCLLGPYGMKYKHLVNKLLKIPEQTFTDNDPQI QSASLVAWEGLIDSLICSQLHAPESNVLVKNPTDQRVFKGSDPTEADGFPKKIKLVMTPL VGIMSSNCDASVHVSCLNTWSYLLYKLDKLASFHSVVRTVWEPILEVIIKVGPVNKNIWS WSFCIELLDNFISAGNKDVNSMLNDHKAMRLPESAKYSWKYYPIKWSPLDLGNLEFFLNT IHGLIIHGSDITLSGEIRTVTYGAASSLFRSLLRSVKHCLKSDLITYDEVILSLNMMLKF LKSVYENMHSSDGGIDDLLPLLLQLLEAFVEELEPSTLQSPLYKVIVDFKIFETSEPVYK FKSAKIPDIGFMNCMEKVSPVAYITLLYFHAVTRATLKAPDYDIVEGKHRYVKLLLSSYE PLEILHLFVSLLYTEKMSCCFEIWVALANCLKDYIDNHNFRSLFKLQSDSPGYAITIHFL CYPFAAYSCRKVYLMLQHVIEVWKSLYVSLSRASEIGYPTLTEDLLSMLCSYFNEALTNG NLVPEPQSSVNGQDIDVLLLFGETMICAVEQASLIAKSEVNESESWRSSIIKSSLDFTSC FVKLSRAKGETNLSTSLIERRLLSSLVHFVGCLHLQKDIALFIEMMTSTLLLWLSHFEAQ DSNFKDQLQQLWIQTLNCLQKTLPIIEFNSSFLQLQEPLLGKTLDHPDLVISNFTVNFWN STFGEQTKLDYPESLLPVLDKLSRRGKIKLGKNSLLANTNDRSDVDKVTVPNRHKVPTTL HRCSKRVELVGNAANSSEGNDRIYSKSKRRHTELTEHQKEVRRAQQGRLMDCSGHGPGIR TYTSVDFSQGTEESQESQDIRDADTILEMLRKAK*

Transcript Sequence

Transcript ID	Solyc07g007920.2.1
Transcript Infomation	Telomere-associated protein RIF1, putative (AHRD V3.3 *** A0A061GVQ3_THECC)
Sequence	TCACTGATTATCATTCCACACAAAAATAATATTTGAAAATAAGTTCATGATATTACCAAC AAAGAAAGTAGAGTATAACATAAAAATAGATTGATAAAATGAATTATCACACATCAAGTA AAAAAAATTGAACTTTTTAAAAAAATTAATAGTGCGATCATATCAACTTTATATAAATAA CACTTTTAATCATTTAACAACGTATTTAACAATATAATATAAGTAGTATTTGAAGTAACA ATAAAGTTAAAGTCCTCATTTGAATTTTCAGAAAATAAGTAGCCTAAATTGCCATATTTT AAAACTTAAGGGGGCCAATTTGAAAACTTCTAAAATATCACATAGGTCCCTCTTCTTCCC TCCTTTGTTTCTCGAATTTGGCGCGAAAATCCGCCATAGACACAAATTCTCCAATTTAGG GCAAAGCTTTGATTTTCTCCAAACCGAAAAAATGGAAACCTTCGAAGAGCAATTCGATCA GATAACAACTCTTTTATCATCAAACAAACTGTTGGCTTACTCGACGCTGCTTCATCTCCA GCAACAATCCGGCGCCGATCCTTCTCTCGTTAAGCTGCTCGCCGATTCATCTTCTATCAT CGTTTCCTATATTATCTCCGATGTATCCGATAACGATGAGGAAATTGCTGCTCAGGCATT GAAGTGCTTGGGATTTATGATATATCATCCATCTATAGTTGGCTCAATTACAGGTGATGA TGCCAGGGCTATTGTTGATTCTCTCGTTGAGGTTATCACAACCAGCAAGATTAAGTCTGT TTGCAACTTGGGTGTGTGGTGTATATCAATGCAGCAGTTTAACTCATTGCTTTTAGATGA AAATTTCCAGTCTTTGCTGAGGGCAATTATTTATGCCCTTGACAATCCTATTGGCTCTCT TTCAATCACATTTGAGGCAATGCAGGCTGTAATGAAGTTGGCGAATACATCAGCTCAAAA TATGAGAGCCATGTCAAACATATGGGCTCCTCCAGTTTATAAAAGGCTAGTCAGCAGCGA TAAAAGGGAAAGAGATATGTCAGAGCGTTGTTTACAAAAAGTCTCTAGCGTGATATTGCC TCCACCAGTAATTCTTTCTAAGTATAGTGATCGTGCAGATGCCCCACCCAAAATCATCGT TCTAAAGGAAGCTGCCCTTGTCACAGATTTGAAGAAGACTTTGCTTTTGACGATGGAGGA GCTGCTGAACCAAGGCTTGAAGATTCAAACTCTACAAGTATGGAGATGGTTTATGTGTCT ACTCGGACCTTATGGAATGAAATATAAGCATTTGGTCAACAAATTGCTTAAAATTCCAGA ACAAACTTTTACGGACAATGATCCACAGATTCAGAGTGCTTCACTGGTGGCCTGGGAAGG TCTCATTGATTCTTTAATCTGCTCACAACTTCATGCTCCTGAAAGCAATGTACTTGTAAA GAATCCTACTGATCAAAGGGTTTTCAAAGGAAGTGATCCAACTGAAGCTGATGGATTTCC CAAAAAGATTAAACTTGTGATGACGCCCCTTGTAGGAATCATGTCAAGCAATTGTGATGC ATCTGTCCATGTATCCTGCCTGAATACATGGTCTTATCTTCTGTATAAGCTCGACAAGTT AGCCAGCTTCCATTCGGTGGTTAGAACAGTTTGGGAGCCCATCTTGGAAGTCATCATCAA GGTTGGGCCTGTCAATAAGAATATATGGTCATGGAGTTTCTGCATTGAGCTGCTTGATAA TTTTATTTCAGCAGGAAATAAAGATGTAAATAGTATGCTAAATGACCATAAGGCAATGAG ACTTCCAGAATCTGCAAAATACTCATGGAAGTATTATCCAATTAAATGGTCACCTTTGGA TCTTGGTAACTTGGAGTTTTTCTTAAACACAATTCATGGTCTGATCATTCACGGGTCAGA TATTACTCTGTCCGGTGAAATCAGGACAGTGACATATGGTGCTGCCTCAAGTTTGTTTCG ATCTCTTCTGAGATCTGTTAAACATTGCTTGAAGTCTGACCTTATAACTTATGACGAGGT TATCTTATCTTTGAATATGATGTTAAAGTTTTTGAAGAGTGTATATGAAAATATGCATTC AAGTGATGGTGGTATAGATGATTTGCTACCTCTTTTACTTCAGCTTTTGGAGGCTTTTGT TGAAGAATTAGAACCATCAACATTGCAATCCCCTCTTTACAAGGTGATAGTAGACTTCAA AATTTTTGAGACGTCAGAACCAGTCTATAAATTCAAAAGTGCAAAGATACCAGATATCGG CTTTATGAATTGTATGGAGAAGGTCTCACCAGTTGCATATATCACTTTGCTCTATTTCCA TGCAGTGACCAGAGCAACATTGAAAGCACCTGATTATGATATAGTTGAAGGGAAACACAG ATATGTCAAGCTTTTGCTATCTTCATACGAGCCTTTGGAAATTCTGCATCTTTTTGTTAG TTTATTATATACAGAGAAGATGTCCTGTTGCTTTGAGATCTGGGTAGCTCTGGCGAATTG TCTGAAAGATTACATAGATAATCATAACTTCCGCTCACTTTTCAAATTGCAGTCGGATAG TCCTGGTTATGCTATAACAATACATTTCCTGTGTTATCCATTTGCTGCATATTCTTGCCG TAAGGTGTATCTCATGCTTCAGCATGTTATTGAAGTATGGAAATCACTTTATGTTTCTCT TAGCCGGGCATCAGAAATTGGTTATCCTACTCTAACTGAGGACCTGTTATCAATGCTCTG TTCATATTTCAATGAAGCATTGACCAATGGCAATCTTGTCCCTGAACCTCAGTCAAGTGT AAATGGTCAGGATATTGATGTTCTGTTATTGTTTGGAGAAACAATGATATGTGCCGTAGA ACAAGCTTCTTTGATAGCAAAATCTGAAGTTAATGAGTCTGAAAGTTGGAGATCCAGTAT TATCAAAAGTAGCTTGGATTTCACTTCCTGCTTCGTGAAGTTATCTAGGGCAAAGGGTGA AACTAATCTATCAACCAGCCTCATTGAGAGAAGGCTGCTATCATCACTGGTTCACTTTGT TGGCTGCTTGCACTTGCAGAAGGATATAGCATTATTCATTGAGATGATGACCAGTACATT GCTTCTGTGGCTGTCACATTTTGAAGCTCAAGACAGTAACTTCAAAGATCAACTTCAACA GTTATGGATCCAGACACTGAACTGTTTGCAGAAAACGCTACCAATAATAGAATTCAATTC TTCTTTCCTTCAGCTCCAAGAGCCTCTTCTTGGGAAAACTCTTGATCATCCAGATCTCGT CATTTCCAACTTCACTGTTAACTTCTGGAATTCTACGTTCGGGGAGCAGACCAAGTTAGA CTACCCTGAAAGCTTACTTCCAGTCCTAGACAAGCTTTCAAGGAGAGGAAAAATAAAACT CGGAAAAAACAGCCTGTTAGCCAATACTAACGACAGATCTGATGTAGATAAAGTTACAGT TCCAAATAGACACAAGGTGCCAACAACACTGCATAGGTGCTCAAAACGAGTTGAACTCGT GGGGAATGCAGCTAATAGTTCAGAAGGAAATGACAGAATTTATTCAAAGTCCAAACGAAG ACACACTGAGCTGACCGAGCATCAAAAAGAAGTAAGAAGAGCACAACAAGGTCGATTAAT GGATTGTAGCGGACATGGTCCGGGGATCAGGACATATACCAGTGTCGATTTCTCTCAAGG AACTGAAGAATCACAAGAAAGCCAGGACATTCGTGATGCAGATACTATTTTGGAAATGTT GCGCAAAGCTAAGTAAGATTTTAGTTTTAACTTTATACAATGTTGTAACATCAATAATTA TGCTCTGTATATATGTGTTCCAATCTTCTTCGTCTCTAAAGCTGCTTCGTTCTGGCTCCG CCCTGTTATTCTTTTCTCTGCATTCTTTCGTTAGGAGTTTCTGCTATGGAAAATGTCGTG TTTCTTCATCATAAACTGTTCATCAGGAGCATCATCATTCTTTAACCCTGTTAAGGTTTT TCATTGGTCTTTTCTTGTGTTCCCGGAGGTTAAAGGTTAC