Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g007890.3.1
CDS Infomation

CCR4-NOT transcription complex subunit 10 (AHRD V3.3 *** A0A0B2P7F1_GLYSO)
Sequence

ATGGATTCATCAGCGTCAAATGCAGTAGCGAATAACAAGGATGTTCCGTCTTCGATGACG
CCGACCGCGGTGGAAGATGACGGCGCGATGTCTGTCAACTCAGGACTTGCAAAGGAGGCA
GCTTTGTTTTTCCAGTCGGGGAATTATGCTGATTGTGTTAGAGTTTTGTATCAACTGTTG
CAGAAAAAAGAAGGCGATCCAAAGGTTCTACATAACATTGCGATTGCTGTGAACTTTCAA
GATGGTTGCTCCAATCCTAAGAAGCTGATTGATGAACTTAATAATGCTAAGAAAAGAAGC
GAAGAGCTTGCTTGTGCTGCTGGGGACCAGGCAGATCCTGCTAGCAATGTTGGTGCCAAG
GCTGTGACAGGAATTAGTGGAAATAACAGTGCACCACGACATCTATCCGCTCAACATAGT
TCCGAACTTGTTTATGCTGATGAGTTTGATCCGTCAGTGACCACATACAATCTAGCAGTT
TGCTGGTTTCATTTGCATGAACATGCAAAAGCATTTTCAATTTTGGAAGGATTGTTTCAG
AACATTGAACCAATAGACGAGGAAATAGCCAAGCGCATTTGCCTATTACTGCTGGATGTT
GCTTTACTTGCTCGAAATGCAGCAAGATCAGCTGATGTGATCAGCTACGTGGAGAAGGTC
TTTTGTAGCAGTAGTTTATTGAGTCAAGTTGACAGCGGAAACTCTGCACTGCCAACAGCT
TCAGCCGTTTTGAAATCGGCTTCATTTCCCAGCAATTCAACTATTCCTGATGCATCTACT
CCAGATTCACCTGCTGCTGGGATAACCTCTGAAGGCTCTTTGTCTAGGACATTATCAGAA
GAGGGACTTGAAGATCTGCATTTAATATCATCCATGGAGATTGGTGGGCAGAACCTACCA
CGACAGTCTGGCTTGAAATCTTCAAATGATCCAACAAGGAACCAAGCTGACGAGTTTATC
TCAACTGCTGATATGAGGATTAAACTGCACCTTTGCAAGGTCCAATTTCTTCTCCTCACC
AGGAATCTTAAGGCAGCTAAGCGTGAAGTTAAGATGGCTATGAACACAGCACGGGGCAAA
GATCATTCTATGGCTCTCTATTTGAAGTCCCAGCTTGAATATACTCGTGGGAATCACCGA
AAAGCAATCAAGCTCTTGATGGCATCAAGTAATCGGGCAGAAACGGGAATTTCTAGCTTA
TACTACAACAACCTGGGTTGCATATATTATCGACTTGGCAAGCATCACACTTCTTCTGTA
TTTTTTGCCAAGGCTCTGAGTAATAGTTCATCTCTCCGGAAAGAGCGACCTTTAAAGCTC
TCAACCATCTCTCAGGACAAGTCTCTTCTCATAACCTATAACTGTGGTATGCAGTACCTG
GCTTGTGGGAAACCATTGCTGGCTGCAAGCTGTTTCTATAAGGCTAGTCAGGTTTTCCAC
AGTAGGCCTCTTTTATGGTTACGAGTTGCAGAATGTTGTCTAATGGCACTTGAGCAGGGA
CTGCTCAAGTCCAGTGGTGTTGCTGCTTCTGACAGGTCTGAAGTTAAAGTACATGTTGTT
GGACAAGGAAAATGGAGGCAACTTGTTATGGAAAATGGATTATTAAGAAATGGACAAGAA
AGTTTTTCAGGTAAGGAAGATTTGGCTACTAAGGATAGACAACTGAAGCTATCGGTACAA
CTTGCTCGTCAGTGTCTTCTGAATGCTTTGCATTTATTGAACAGTTCTGAATCAAAAGGT
AACAAGTCCACACAGTCTCATGTTTCTGGTGTGGAAGAAAGTGAAACAAGAGAAGTAGTA
CCATCCAAGCATGGATCAACTGAACCTAAGTCACTGAACGTGCCAGCATCTGGTCAGGTT
AATGCAAATGGGGAGGTGAAAGAGCAAAAGGGTACAAGCAGTCAGAATGCCGCCTTCTTG
AATTCTCTCGGCGAGTATGAAGCCACATGTAGAAAAGAGAACCTGATGATTGAGCAAGCT
GCATTGGCTGATTTGGCTTTTGTAGAGCTGGAATTGGGAAATCCATTGAAGGCTCTTACA
ATTGCACGATCTCTCTTGAAAGTCCAAGAATGTTCTAGGATATACATCTTTCTTGGTAAT
GTGTATGCTGCTGAAGCTCTATGCTTGCTGAACCGGGCAAAGGAAGCTGCAGAGCATTTG
TCAACCTTTATCTCCAGTGGCAAGGATGTTGATCTGCCATTTAGTGAAGAGGATTCTGAA
ATGTGGAGACAGGAGAAAACATTGGAATCGGAAGATACTAATGTTGGATCAGCTGCTGTG
AATTCCTTTCCTTCTGAGGAATCTCAAGCATTTGTGTTTGTTAAGCCGGAGGAGGCCCGC
GGAATTCTCTTCACAAACTTAGCTGCCATGGCTGCTATGCAAGGAGACATTGAACAGGCT
CAAACTTATGTTATGCAAGCACTATCGACAAAACCTCAACGTCCTGAAGCTATTCTTACT
GCAGTATACTTGGATCTTCTGTGCGGGAAGACACAAGAAGCTCTCACAAAGTTGAAACAG
TGTAGTCGTATTAGGTTCCTACCAAGCAGTCCGACGTTAAGTGGTTCATCGTGA

Peptide Sequence

PEP ID

Solyc07g007890.3.1
PEP Infomation

CCR4-NOT transcription complex subunit 10 (AHRD V3.3 *** A0A0B2P7F1_GLYSO)
Sequence

MDSSASNAVANNKDVPSSMTPTAVEDDGAMSVNSGLAKEAALFFQSGNYADCVRVLYQLL
QKKEGDPKVLHNIAIAVNFQDGCSNPKKLIDELNNAKKRSEELACAAGDQADPASNVGAK
AVTGISGNNSAPRHLSAQHSSELVYADEFDPSVTTYNLAVCWFHLHEHAKAFSILEGLFQ
NIEPIDEEIAKRICLLLLDVALLARNAARSADVISYVEKVFCSSSLLSQVDSGNSALPTA
SAVLKSASFPSNSTIPDASTPDSPAAGITSEGSLSRTLSEEGLEDLHLISSMEIGGQNLP
RQSGLKSSNDPTRNQADEFISTADMRIKLHLCKVQFLLLTRNLKAAKREVKMAMNTARGK
DHSMALYLKSQLEYTRGNHRKAIKLLMASSNRAETGISSLYYNNLGCIYYRLGKHHTSSV
FFAKALSNSSSLRKERPLKLSTISQDKSLLITYNCGMQYLACGKPLLAASCFYKASQVFH
SRPLLWLRVAECCLMALEQGLLKSSGVAASDRSEVKVHVVGQGKWRQLVMENGLLRNGQE
SFSGKEDLATKDRQLKLSVQLARQCLLNALHLLNSSESKGNKSTQSHVSGVEESETREVV
PSKHGSTEPKSLNVPASGQVNANGEVKEQKGTSSQNAAFLNSLGEYEATCRKENLMIEQA
ALADLAFVELELGNPLKALTIARSLLKVQECSRIYIFLGNVYAAEALCLLNRAKEAAEHL
STFISSGKDVDLPFSEEDSEMWRQEKTLESEDTNVGSAAVNSFPSEESQAFVFVKPEEAR
GILFTNLAAMAAMQGDIEQAQTYVMQALSTKPQRPEAILTAVYLDLLCGKTQEALTKLKQ
CSRIRFLPSSPTLSGSS*

Transcript Sequence

Transcript ID

Solyc07g007890.3.1
Transcript Infomation

CCR4-NOT transcription complex subunit 10 (AHRD V3.3 *** A0A0B2P7F1_GLYSO)
Sequence

TATAGAAGTGATGAAGTGTTAAAACGTAGTACCCCTGTGCTCTCTCTCTCTAGATTTTCT
CTCTCTATCCGAATTCTTCCCCATTTTGGAAAAATCGCCCTTTGTTTCTCTCTCTAAAAA
TCGCTATCGATCGATACATATATATATATATGTAAGTCTGTTGTTCATCTTGGTGACTCT
AGGGTTTTGGATATCGGAATTCAGATTTGAATTTGCGGCGCCGGATAACTGAGGGTTTTT
GAATCGGTTCAGTTCGATTTTTTGCTTTCTTGGGTTGATTTTGTGGATCTGTGTGATCGG
AAATGGATTCATCAGCGTCAAATGCAGTAGCGAATAACAAGGATGTTCCGTCTTCGATGA
CGCCGACCGCGGTGGAAGATGACGGCGCGATGTCTGTCAACTCAGGACTTGCAAAGGAGG
CAGCTTTGTTTTTCCAGTCGGGGAATTATGCTGATTGTGTTAGAGTTTTGTATCAACTGT
TGCAGAAAAAAGAAGGCGATCCAAAGGTTCTACATAACATTGCGATTGCTGTGAACTTTC
AAGATGGTTGCTCCAATCCTAAGAAGCTGATTGATGAACTTAATAATGCTAAGAAAAGAA
GCGAAGAGCTTGCTTGTGCTGCTGGGGACCAGGCAGATCCTGCTAGCAATGTTGGTGCCA
AGGCTGTGACAGGAATTAGTGGAAATAACAGTGCACCACGACATCTATCCGCTCAACATA
GTTCCGAACTTGTTTATGCTGATGAGTTTGATCCGTCAGTGACCACATACAATCTAGCAG
TTTGCTGGTTTCATTTGCATGAACATGCAAAAGCATTTTCAATTTTGGAAGGATTGTTTC
AGAACATTGAACCAATAGACGAGGAAATAGCCAAGCGCATTTGCCTATTACTGCTGGATG
TTGCTTTACTTGCTCGAAATGCAGCAAGATCAGCTGATGTGATCAGCTACGTGGAGAAGG
TCTTTTGTAGCAGTAGTTTATTGAGTCAAGTTGACAGCGGAAACTCTGCACTGCCAACAG
CTTCAGCCGTTTTGAAATCGGCTTCATTTCCCAGCAATTCAACTATTCCTGATGCATCTA
CTCCAGATTCACCTGCTGCTGGGATAACCTCTGAAGGCTCTTTGTCTAGGACATTATCAG
AAGAGGGACTTGAAGATCTGCATTTAATATCATCCATGGAGATTGGTGGGCAGAACCTAC
CACGACAGTCTGGCTTGAAATCTTCAAATGATCCAACAAGGAACCAAGCTGACGAGTTTA
TCTCAACTGCTGATATGAGGATTAAACTGCACCTTTGCAAGGTCCAATTTCTTCTCCTCA
CCAGGAATCTTAAGGCAGCTAAGCGTGAAGTTAAGATGGCTATGAACACAGCACGGGGCA
AAGATCATTCTATGGCTCTCTATTTGAAGTCCCAGCTTGAATATACTCGTGGGAATCACC
GAAAAGCAATCAAGCTCTTGATGGCATCAAGTAATCGGGCAGAAACGGGAATTTCTAGCT
TATACTACAACAACCTGGGTTGCATATATTATCGACTTGGCAAGCATCACACTTCTTCTG
TATTTTTTGCCAAGGCTCTGAGTAATAGTTCATCTCTCCGGAAAGAGCGACCTTTAAAGC
TCTCAACCATCTCTCAGGACAAGTCTCTTCTCATAACCTATAACTGTGGTATGCAGTACC
TGGCTTGTGGGAAACCATTGCTGGCTGCAAGCTGTTTCTATAAGGCTAGTCAGGTTTTCC
ACAGTAGGCCTCTTTTATGGTTACGAGTTGCAGAATGTTGTCTAATGGCACTTGAGCAGG
GACTGCTCAAGTCCAGTGGTGTTGCTGCTTCTGACAGGTCTGAAGTTAAAGTACATGTTG
TTGGACAAGGAAAATGGAGGCAACTTGTTATGGAAAATGGATTATTAAGAAATGGACAAG
AAAGTTTTTCAGGTAAGGAAGATTTGGCTACTAAGGATAGACAACTGAAGCTATCGGTAC
AACTTGCTCGTCAGTGTCTTCTGAATGCTTTGCATTTATTGAACAGTTCTGAATCAAAAG
GTAACAAGTCCACACAGTCTCATGTTTCTGGTGTGGAAGAAAGTGAAACAAGAGAAGTAG
TACCATCCAAGCATGGATCAACTGAACCTAAGTCACTGAACGTGCCAGCATCTGGTCAGG
TTAATGCAAATGGGGAGGTGAAAGAGCAAAAGGGTACAAGCAGTCAGAATGCCGCCTTCT
TGAATTCTCTCGGCGAGTATGAAGCCACATGTAGAAAAGAGAACCTGATGATTGAGCAAG
CTGCATTGGCTGATTTGGCTTTTGTAGAGCTGGAATTGGGAAATCCATTGAAGGCTCTTA
CAATTGCACGATCTCTCTTGAAAGTCCAAGAATGTTCTAGGATATACATCTTTCTTGGTA
ATGTGTATGCTGCTGAAGCTCTATGCTTGCTGAACCGGGCAAAGGAAGCTGCAGAGCATT
TGTCAACCTTTATCTCCAGTGGCAAGGATGTTGATCTGCCATTTAGTGAAGAGGATTCTG
AAATGTGGAGACAGGAGAAAACATTGGAATCGGAAGATACTAATGTTGGATCAGCTGCTG
TGAATTCCTTTCCTTCTGAGGAATCTCAAGCATTTGTGTTTGTTAAGCCGGAGGAGGCCC
GCGGAATTCTCTTCACAAACTTAGCTGCCATGGCTGCTATGCAAGGAGACATTGAACAGG
CTCAAACTTATGTTATGCAAGCACTATCGACAAAACCTCAACGTCCTGAAGCTATTCTTA
CTGCAGTATACTTGGATCTTCTGTGCGGGAAGACACAAGAAGCTCTCACAAAGTTGAAAC
AGTGTAGTCGTATTAGGTTCCTACCAAGCAGTCCGACGTTAAGTGGTTCATCGTGA