Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g007870.3.1
CDS Infomation

12-oxophytodienoate reductase 3
Sequence

ATGGCGTCTTCAGCTCAAGATGGAAACAATCCCCTTTTCTCTCCTTACAAGATGGGCAAG
TTCAATCTATCCCACAGGGTAGTATTGGCTCCGATGACAAGGTGCAGAGCACTGAATAAT
ATTCCACAGGCGGCGCTAGGGGAGTATTACGAGCAGAGAGCGACGGCCGGTGGATTTCTG
ATCACTGAAGGCACTATGATTTCTCCGACTTCAGCTGGGTTTCCTCATGTGCCAGGGATT
TTCACAAAGGAACAAGTAAGGGAATGGAAGAAAATAGTTGATGTAGTGCATGCAAAGGGT
GCTGTCATATTTTGTCAGCTGTGGCATGTTGGTCGTGCATCTCATGAAGTGTATCAACCT
GCTGGAGCTGCACCAATATCATCCACTGAGAAGCCTATATCAAATAGGTGGAGAATTCTA
ATGCCTGATGGAACTCATGGGATTTATCCAAAACCAAGAGCAATTGGAACCTATGAGATC
TCACAAGTTGTTGAAGATTATCGCAGGTCGGCCTTGAATGCTATTGAAGCAGGTTTCGAT
GGTATTGAAATCCATGGAGCTCACGGTTACTTGATTGATCAATTCTTGAAAGATGGGATC
AATGACCGGACAGATGAGTATGGTGGATCACTAGCCAACCGGTGCAAATTCATCACACAG
GTGGTTCAAGCAGTAGTCTCAGCAATAGGAGCTGATCGCGTAGGCGTTAGAGTTTCACCA
GCAATAGATCATCTTGATGCCATGGACTCTAATCCACTCAGCCTTGGCTTAGCAGTTGTT
GAAAGACTAAACAAAATCCAACTCCATTCTGGTTCCAAGCTTGCCTATCTTCATGTAACA
CAGCCACGATACGTAGCATATGGGCAAACTGAAGCAGGCAGACTTGGCAGTGAAGAGGAA
GAGGCTCGTTTAATGAGGACTTTGAGGAACGCGTATCAGGGGACATTCATTTGCAGTGGT
GGATACACTAGGGAACTAGGAATTGAGGCTGTGGCACAAGGTGATGCTGATCTCGTGTCA
TATGGTCGTCTTTTCATCTCTAATCCTGATTTGGTTATGAGAATCAAGCTAAATGCACCT
CTAAATAAGTATAACAGGAAGACATTCTATACTCAAGATCCAGTTGTGGGATACACAGAT
TACCCTTTCCTTCAAGGAAATGGAAGCAATGGACCGTTATCGCGTCTGTGA

Peptide Sequence

PEP ID

Solyc07g007870.3.1
PEP Infomation

12-oxophytodienoate reductase 3
Sequence

MASSAQDGNNPLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFL
ITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQP
AGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFD
GIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSP
AIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEE
EARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAP
LNKYNRKTFYTQDPVVGYTDYPFLQGNGSNGPLSRL*

Transcript Sequence

Transcript ID

Solyc07g007870.3.1
Transcript Infomation

12-oxophytodienoate reductase 3
Sequence

AAATTGGGATTGATACTTGAATAAAAAATTTACAACACAATATATATCTTTAGTTGAGAA
TAATACATAATTCAGTCTGTTACAACAATATTTACACATTGATACATCAAAAAGAACAAT
TGATTTTTTTGTATCAGTTAAATAAAAAGTTTGAGAACAACTTATGTAATTTTGTATCAT
ATATGTAATATGTTAGTACTGATATATAATTAATTCAATTGAAATCTTACTGAAAATTAG
ATTTTTATGTATTAAAATAAATTATATATAGTGATACATTCAAAAATGATAACAACAATT
TATATTGATATTCTATCAATAATGTATCATGAATTCAAATTAAATTGAAGATTGAACATA
AAAAATACAGATATAGATCAGAACTTATCACCTTAAGTAGATTAGGACGGAAAATTGAAG
ATGACATGTTTATACCCCTGTTTAGGGGATTTTTCAACCTTCGCTTTTGAAGAAAAAGGC
ACATTCTTCCTCTCCTTCTCAATACTCACGTTGGCAGTTAGTTCTACAGATCCTCTTTCA
AACAACAATGGCGTCTTCAGCTCAAGATGGAAACAATCCCCTTTTCTCTCCTTACAAGAT
GGGCAAGTTCAATCTATCCCACAGGGTAGTATTGGCTCCGATGACAAGGTGCAGAGCACT
GAATAATATTCCACAGGCGGCGCTAGGGGAGTATTACGAGCAGAGAGCGACGGCCGGTGG
ATTTCTGATCACTGAAGGCACTATGATTTCTCCGACTTCAGCTGGGTTTCCTCATGTGCC
AGGGATTTTCACAAAGGAACAAGTAAGGGAATGGAAGAAAATAGTTGATGTAGTGCATGC
AAAGGGTGCTGTCATATTTTGTCAGCTGTGGCATGTTGGTCGTGCATCTCATGAAGTGTA
TCAACCTGCTGGAGCTGCACCAATATCATCCACTGAGAAGCCTATATCAAATAGGTGGAG
AATTCTAATGCCTGATGGAACTCATGGGATTTATCCAAAACCAAGAGCAATTGGAACCTA
TGAGATCTCACAAGTTGTTGAAGATTATCGCAGGTCGGCCTTGAATGCTATTGAAGCAGG
TTTCGATGGTATTGAAATCCATGGAGCTCACGGTTACTTGATTGATCAATTCTTGAAAGA
TGGGATCAATGACCGGACAGATGAGTATGGTGGATCACTAGCCAACCGGTGCAAATTCAT
CACACAGGTGGTTCAAGCAGTAGTCTCAGCAATAGGAGCTGATCGCGTAGGCGTTAGAGT
TTCACCAGCAATAGATCATCTTGATGCCATGGACTCTAATCCACTCAGCCTTGGCTTAGC
AGTTGTTGAAAGACTAAACAAAATCCAACTCCATTCTGGTTCCAAGCTTGCCTATCTTCA
TGTAACACAGCCACGATACGTAGCATATGGGCAAACTGAAGCAGGCAGACTTGGCAGTGA
AGAGGAAGAGGCTCGTTTAATGAGGACTTTGAGGAACGCGTATCAGGGGACATTCATTTG
CAGTGGTGGATACACTAGGGAACTAGGAATTGAGGCTGTGGCACAAGGTGATGCTGATCT
CGTGTCATATGGTCGTCTTTTCATCTCTAATCCTGATTTGGTTATGAGAATCAAGCTAAA
TGCACCTCTAAATAAGTATAACAGGAAGACATTCTATACTCAAGATCCAGTTGTGGGATA
CACAGATTACCCTTTCCTTCAAGGAAATGGAAGCAATGGACCGTTATCGCGTCTGTGAGA
AGAACAGTTGTATTTTGTAACAACTTGTGAAACCTGATTTTGTTGGGCAATTTATTTACT
TGGTAAAGTATGCAAGGGATGTTGCTTTTTTAGAGCCTAGTACCAGCCAAGCCTCCTCGA
CTTGCTAATAAGAGTCGGTTATGGAATAGTCTTTTAGTCGGCTTTCTCTTTCTTAAGCAC
TTGCTGGTGAATTTCAGGAAGAAATTTGTACTATTAAAAAAACATCAGGTTTTATCATTC
ATGAGAAAGCTCTAAAATTATCTTCTCTTCTTAAGCATT