Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g007360.2.1
CDS Infomation

Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A124SCG9_CYNCS)
Sequence

ATGGCTACCGCCGGCAGAAAGAGAGGAAGGAAGAAGAAGAAGAAGATGAACAAGAAGATA
ATCAAACTCACTAAGAAATTCAAAACCACCCTTCAACTCCGCCACCAACACTGTACTAAA
CTCATACCCCAACTCATCGCCGCCATTTCCTCCGCTTACTCTTTCCTCCGCCGCAATGAC
CTCAATCTCCTCCCTCATCAATCCCTTGCACTCGAATCCCTAATATCCTCATCCTCCACT
TCCATTTCCAACATCGTTTCACTTCTCTCCCTCCCTCCTCCGCCCCCACGCGCTGCTCCA
CCCCCACGCGCCGCCGTAACCTCCCCGAGCGACGATGACCCAGTACCCGAGTGTTGGTTT
CAGCGATTTCTGATGGCTGATTCGGATACCCTTTGGGCTGAAACATTCAATCTGACGAAG
CCCTCTTTTACCCTTCTGCTTCGTCTTCTAACGCCTTCGCTTTCTTCACTTTCTGTTCCT
CCTAATTACGCTCTTGCTTTGACCCTTTTTCGTCTTGCTCATGGTGCTTCGTATTCTGCT
GTTTCGCGACGATTTGGGATTGATTCCCCTACTGCTTGTCGCGTTTTCTACACTGTATGT
AAAGCTATTACTGAGAACCTGGGGCATTTGTTTGAGCTCAAGAGTGATATCAATAGGGTT
ATTGTGGGGTTTGGCTGGATTTCATTGCCTAACTGTTGTGGTGTTTTGGGGATTGAAAAG
TTCGAATTGGGTGGTGATGTGCTGGGTGAAAATGGGTTTATGATTGTTCAAGCTTTGGTT
GATTCTGAAGGAAGATTCTTGGATGTATCAGCTGGGTGGCCTTCTACTATGAGTCCTGAA
ACTATTTTACGAAAATCTAAGCTTTATTTGGGTGTTGAGGAATCAAAGGAGTACTTAAAT
GGTTCATCTTTTGAGCTAAATGATGGCAATTCAATACCTCAGTATATTCTTGGTGAGTCC
TGTTTCCCACTTTTACCATGGGTTCTCACACCCTACAGAGGAGAATCCAGCGTCGAAGAT
GGGGCGGAAGTGGCGTTTAATTCAGTGCATAGAAGAGGAATGCAGTTGGTGGGGACAGCT
TTTGGGAGAGTTAGGGAAAACTGGAAGCTTCTAACTAGGAAATGGAATAAGCAATGTATT
GAGGCGTTCCCATTTCTGATTGTGACATGCTGTTTGCTGCATAATTTTCTTATCAAGTGT
AGTGAAGCAGTGACAGATGAAACTGAGGAGTATCCGAGATTTGAAGAGTTTCCTGTGTTT
GATGGAGAGGTTGATGAAAGTGGGAAGAAGATTAGAGACGCGCTTGCCTCGCACTTGTTT
AGGTTCTCTTTCGGTCTCAAGTTCAGTATTTGCCATCTCGTGCTTGATGTTCATTATGCT
GAAATGGGCAAGAATGCAGGGACACAGAAGGTCAATATCACTGCTTGTTCAGTGGCTCCT
GCCCGTAAGGCACCTCTATCGTGCCCGTCCTTAGCTCTTGGGCGAGTTGAAATGACTTTT
TTGAAGTTTGGCCTTATACGGGGCAAGATGGGTTCAATTGTAAGCGGGGCGGGTTGA

Peptide Sequence

PEP ID

Solyc07g007360.2.1
PEP Infomation

Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A124SCG9_CYNCS)
Sequence

MATAGRKRGRKKKKKMNKKIIKLTKKFKTTLQLRHQHCTKLIPQLIAAISSAYSFLRRND
LNLLPHQSLALESLISSSSTSISNIVSLLSLPPPPPRAAPPPRAAVTSPSDDDPVPECWF
QRFLMADSDTLWAETFNLTKPSFTLLLRLLTPSLSSLSVPPNYALALTLFRLAHGASYSA
VSRRFGIDSPTACRVFYTVCKAITENLGHLFELKSDINRVIVGFGWISLPNCCGVLGIEK
FELGGDVLGENGFMIVQALVDSEGRFLDVSAGWPSTMSPETILRKSKLYLGVEESKEYLN
GSSFELNDGNSIPQYILGESCFPLLPWVLTPYRGESSVEDGAEVAFNSVHRRGMQLVGTA
FGRVRENWKLLTRKWNKQCIEAFPFLIVTCCLLHNFLIKCSEAVTDETEEYPRFEEFPVF
DGEVDESGKKIRDALASHLFRFSFGLKFSICHLVLDVHYAEMGKNAGTQKVNITACSVAP
ARKAPLSCPSLALGRVEMTFLKFGLIRGKMGSIVSGAG*

Transcript Sequence

Transcript ID

Solyc07g007360.2.1
Transcript Infomation

Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A124SCG9_CYNCS)
Sequence

ATGTATATTAGCTTGTGCTCCATTAGATAGATCAAAGGAAATATTTTGCTTTAAGGAACG
CAGAGAGATCTCTTTGAAAGTTGAAGGTCATCAATGGCTACCGCCGGCAGAAAGAGAGGA
AGGAAGAAGAAGAAGAAGATGAACAAGAAGATAATCAAACTCACTAAGAAATTCAAAACC
ACCCTTCAACTCCGCCACCAACACTGTACTAAACTCATACCCCAACTCATCGCCGCCATT
TCCTCCGCTTACTCTTTCCTCCGCCGCAATGACCTCAATCTCCTCCCTCATCAATCCCTT
GCACTCGAATCCCTAATATCCTCATCCTCCACTTCCATTTCCAACATCGTTTCACTTCTC
TCCCTCCCTCCTCCGCCCCCACGCGCTGCTCCACCCCCACGCGCCGCCGTAACCTCCCCG
AGCGACGATGACCCAGTACCCGAGTGTTGGTTTCAGCGATTTCTGATGGCTGATTCGGAT
ACCCTTTGGGCTGAAACATTCAATCTGACGAAGCCCTCTTTTACCCTTCTGCTTCGTCTT
CTAACGCCTTCGCTTTCTTCACTTTCTGTTCCTCCTAATTACGCTCTTGCTTTGACCCTT
TTTCGTCTTGCTCATGGTGCTTCGTATTCTGCTGTTTCGCGACGATTTGGGATTGATTCC
CCTACTGCTTGTCGCGTTTTCTACACTGTATGTAAAGCTATTACTGAGAACCTGGGGCAT
TTGTTTGAGCTCAAGAGTGATATCAATAGGGTTATTGTGGGGTTTGGCTGGATTTCATTG
CCTAACTGTTGTGGTGTTTTGGGGATTGAAAAGTTCGAATTGGGTGGTGATGTGCTGGGT
GAAAATGGGTTTATGATTGTTCAAGCTTTGGTTGATTCTGAAGGAAGATTCTTGGATGTA
TCAGCTGGGTGGCCTTCTACTATGAGTCCTGAAACTATTTTACGAAAATCTAAGCTTTAT
TTGGGTGTTGAGGAATCAAAGGAGTACTTAAATGGTTCATCTTTTGAGCTAAATGATGGC
AATTCAATACCTCAGTATATTCTTGGTGAGTCCTGTTTCCCACTTTTACCATGGGTTCTC
ACACCCTACAGAGGAGAATCCAGCGTCGAAGATGGGGCGGAAGTGGCGTTTAATTCAGTG
CATAGAAGAGGAATGCAGTTGGTGGGGACAGCTTTTGGGAGAGTTAGGGAAAACTGGAAG
CTTCTAACTAGGAAATGGAATAAGCAATGTATTGAGGCGTTCCCATTTCTGATTGTGACA
TGCTGTTTGCTGCATAATTTTCTTATCAAGTGTAGTGAAGCAGTGACAGATGAAACTGAG
GAGTATCCGAGATTTGAAGAGTTTCCTGTGTTTGATGGAGAGGTTGATGAAAGTGGGAAG
AAGATTAGAGACGCGCTTGCCTCGCACTTGTTTAGGTTCTCTTTCGGTCTCAAGTTCAGT
ATTTGCCATCTCGTGCTTGATGTTCATTATGCTGAAATGGGCAAGAATGCAGGGACACAG
AAGGTCAATATCACTGCTTGTTCAGTGGCTCCTGCCCGTAAGGCACCTCTATCGTGCCCG
TCCTTAGCTCTTGGGCGAGTTGAAATGACTTTTTTGAAGTTTGGCCTTATACGGGGCAAG
ATGGGTTCAATTGTAAGCGGGGCGGGTTGAAATGACTTTTCAAAAAATAAACGAAACAAA
ATAGCTTGAGTTGATGCTCTTTTATTTCTGATTTGTAAAAAAATAATAATTCGATAAA