Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g007220.3.1
CDS Infomation

Protein phosphatase 2c, putative (AHRD V3.3 *** B9T2N5_RICCO)
Sequence

ATGTGTATTCAAGATTCAGAGCAAGTGAATGAGGGTATGGAAAATTTGGCCATTTCCAAC
ACTGATGACAATTTCAAGAACCAATCTTTACATTCTGAGGCTGAATTTCAACATACCCAA
AATGAGAATTGTGGAAAAGTTACTTCTTCTAGTCCTTCTGTCATGAGAAACTCATTCCCA
CTGGAAAGTATTTCAGAAGACACAACTATTGCAGATTGGAAACAAATACTGTTGAGTAAT
TTCCTCCCGGTCCTTAGGTCGGGTGATTGGTCTGATATTGGAGGTCGGGTTGACATGGAA
GACACTCACATCTGTATTGCAGACCTAGCTAAGAATTTTGGCCTTAATATACTTGGTGAG
GATGCTATTTCTTTCTATGGAGTCTTTGATGGACATGGAGGGAAAGGAGCATCACAGTTT
GTTCGTGATTACTTACCAAAGATCATTGTCGAGGATGCTGATTTTCCCCTGGAACTTGAG
AAAGTGGTCACAAGATCTTTTGCAGAGACGGATGCTGCCTTTGCCAAGTCATGCTATGTT
GACTCAGCCTTGTCCTCCGGCACTACTGCACTCACTGCAATGATATTTGGAAGATCACTT
CTTGTGGCCAATGCTGGTGATTGTCGAGCAGTTGTATCTCGACGTGGACTGGCTATAGAA
ATGTCAAGGGACCACAGACCTTGTTGTGTTACTGAAAGAACTCGCATCGAGTCAGTAGGT
GGATTTGTTGATGATGGCTATTTGAATGGACAGCTAGGCGTGAGCCGGGCTTTAGGTAAC
TGGCATATTAAAGGATTGAAGGAAGTTGAGAAGGGCGGACCATTGAGCGCTGAACCTGAA
CTGAAACTGCTGACATTGACAAAGGAGGACGAGTTCCTGATCATCGGTAGTGATGGGATA
TGGGATGTTTTCCGAAGCCAAAATGCAGTTGATTTTGCTCGGAGGAGACTGCAGGACCAT
AACAATGTAAAGAGATGCTGCAAGGAAATGATAGACGAGGCCAAAAAACGCGGTGCCATA
GACAACTTAACAGTAGTCATGGTCTGTTTTCACTCCGAGCCTCCACCTCCAGTTGTTTTT
CAAAGATCAAGAATAAGGAAAAGTATATCCGCCGAGGGACTTGCAAATCTACGATCTTTG
CTTGAAGACTAG

Peptide Sequence

PEP ID

Solyc07g007220.3.1
PEP Infomation

Protein phosphatase 2c, putative (AHRD V3.3 *** B9T2N5_RICCO)
Sequence

MCIQDSEQVNEGMENLAISNTDDNFKNQSLHSEAEFQHTQNENCGKVTSSSPSVMRNSFP
LESISEDTTIADWKQILLSNFLPVLRSGDWSDIGGRVDMEDTHICIADLAKNFGLNILGE
DAISFYGVFDGHGGKGASQFVRDYLPKIIVEDADFPLELEKVVTRSFAETDAAFAKSCYV
DSALSSGTTALTAMIFGRSLLVANAGDCRAVVSRRGLAIEMSRDHRPCCVTERTRIESVG
GFVDDGYLNGQLGVSRALGNWHIKGLKEVEKGGPLSAEPELKLLTLTKEDEFLIIGSDGI
WDVFRSQNAVDFARRRLQDHNNVKRCCKEMIDEAKKRGAIDNLTVVMVCFHSEPPPPVVF
QRSRIRKSISAEGLANLRSLLED*

Transcript Sequence

Transcript ID

Solyc07g007220.3.1
Transcript Infomation

Protein phosphatase 2c, putative (AHRD V3.3 *** B9T2N5_RICCO)
Sequence

ACAAAAGAATCTATTTTTAAAATTGTGGTTGAATGGAAATGGAGAAGTAAATTACAACTT
TTTTTTTTTTATGACCCCATTGCTAACATATTCCCAAGAATCTTCTCTTTCATCACAATT
TCCACACATATGTATTCTCACTTTCTCCCAATTCCTTTCAATACTAACAACTTGCTCAAA
CTAAAAGTGATAAAAACAACCCATATTTCTTCTTCCTCCAAATATTCTACTCTTTTTTTC
TTGTTTTTTTTGCCCCTATTAAATTTGTGTAATAACTAGTAACATGTGTATTCAAGATTC
AGAGCAAGTGAATGAGGGTATGGAAAATTTGGCCATTTCCAACACTGATGACAATTTCAA
GAACCAATCTTTACATTCTGAGGCTGAATTTCAACATACCCAAAATGAGAATTGTGGAAA
AGTTACTTCTTCTAGTCCTTCTGTCATGAGAAACTCATTCCCACTGGAAAGTATTTCAGA
AGACACAACTATTGCAGATTGGAAACAAATACTGTTGAGTAATTTCCTCCCGGTCCTTAG
GTCGGGTGATTGGTCTGATATTGGAGGTCGGGTTGACATGGAAGACACTCACATCTGTAT
TGCAGACCTAGCTAAGAATTTTGGCCTTAATATACTTGGTGAGGATGCTATTTCTTTCTA
TGGAGTCTTTGATGGACATGGAGGGAAAGGAGCATCACAGTTTGTTCGTGATTACTTACC
AAAGATCATTGTCGAGGATGCTGATTTTCCCCTGGAACTTGAGAAAGTGGTCACAAGATC
TTTTGCAGAGACGGATGCTGCCTTTGCCAAGTCATGCTATGTTGACTCAGCCTTGTCCTC
CGGCACTACTGCACTCACTGCAATGATATTTGGAAGATCACTTCTTGTGGCCAATGCTGG
TGATTGTCGAGCAGTTGTATCTCGACGTGGACTGGCTATAGAAATGTCAAGGGACCACAG
ACCTTGTTGTGTTACTGAAAGAACTCGCATCGAGTCAGTAGGTGGATTTGTTGATGATGG
CTATTTGAATGGACAGCTAGGCGTGAGCCGGGCTTTAGGTAACTGGCATATTAAAGGATT
GAAGGAAGTTGAGAAGGGCGGACCATTGAGCGCTGAACCTGAACTGAAACTGCTGACATT
GACAAAGGAGGACGAGTTCCTGATCATCGGTAGTGATGGGATATGGGATGTTTTCCGAAG
CCAAAATGCAGTTGATTTTGCTCGGAGGAGACTGCAGGACCATAACAATGTAAAGAGATG
CTGCAAGGAAATGATAGACGAGGCCAAAAAACGCGGTGCCATAGACAACTTAACAGTAGT
CATGGTCTGTTTTCACTCCGAGCCTCCACCTCCAGTTGTTTTTCAAAGATCAAGAATAAG
GAAAAGTATATCCGCCGAGGGACTTGCAAATCTACGATCTTTGCTTGAAGACTAGAGCTG
CAACGTTCGATATCAATTTTGGCAGCTTACAAACATATCCACCTAAACAACAGCGATAAT
GACGATCACTTGGTTACTCCTGGACAACTTAGTAAAGACATCAGAATCAGAGGTAAACTT
ATCTTCTTCTTGTTGTAATTCTCCCATTTTAACCTAAAAATCCAAGACGAAATAAAGCTT
AAGGGACATAGGAGCAACCTGTTGAGCTAAATTTTTGTACATATATTAAACAATATTCTT
CCATTGTATGATTCCCTGACTAAAGGGAAATTCAAACACCTTCTGGTGAGACAGAAATTG
AATTGTTGGTTTGATCCAACTTTTTTAGTGTCATAACAAAGGTTATGTAATTGCCAGCAT
TCTTAGTTGCTTTGAATGGTTAAATGAAAGTTCATCCGAATCTAGTACTTTCAGTGAAAA
AAATACATTTATATATGAATTAGTACTTGTATTGTAATAAATAAAGTTGAGCTTAGAGAG
CTTATATCCTGAATTCTCCTTTGATGTTCACTTCTTTAAATACTAAAACGCTCAATTCAT
CGCGATGCAAGGGGTTGTCGCTTCATATGTGAAACCAGTGCTACATAGAAATAAATTTGT
GTTTCAAGTTATGGTGGACACACTTTCAAATATCATTGAAGATGCAAAATAAGTGAAATG
ACTATTTTACCTTTCATTCCATTCAATTCTCTATTGGAGTTGAATACCTACTATAGAATA
CATATTTCAATGTTCATTTAAACCAAAAATAAATCAATGGTATGACACTCTCATCCACAA
TCGTGTTCAAATATTACAAAATTCCCCTTAAAAAAAAGGTTGTCTAACT