Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g007200.3.1
CDS Infomation

Ring finger protein, putative (AHRD V3.3 *** B9T2M9_RICCO)
Sequence

ATGGAAGAAGATCCAGCTGAAATGCTGGTGGATTCTGCAGAACATGCTGACACAGGAAAG
CTCCAAAACTCTGAGAAGGACCCTTCACCTGATTTTATTCCCTCCCTAGCTGAACGTGGA
GCTTCATCTGCAAGCAATCTGGTAAATAGTGAAAAATCTACATCTGAAGACGCTTCAACC
AATGTTCAGGGAGGTAATCGAAGAGAAAACTCAACCAAAGACATGGAATTAGTCACTCAA
TATAATTCTGGACGTAAACATGGTGAAACTGCTAGTACATCTCAGGATGACCGATCATTT
CGCTATCCACTTTCTTTAAACAGAAGGGCAGAGGATGATGCTGTAAATAATGTCGCCACT
ACAGTGAATGTAGATGTCTCTCAAGTTTTTGCCGGTTACTCTCATTCTAGCAGTCCATTG
TCTCATGGAAATGGAGAGTCTTCATCAAGTGAAGATTTTGTTGCAAACCACACAAATGAA
ATTCTTATCTTCAATAATTCTGATTCTGTATCAGTTCTTTCGGATTCTTCAGTTACGCCA
CATTTGGCGGGAGATGATATGCGTCAGGATACACCACCTTCAGGTTTTGAATTTCTGGTG
TCAGACAGGGAAGAGGGTGTAAGAGATGGAAGTGCACTTCATGTTGACATGGCAAATGCC
TCTCCCACTTTTTTCTCTAATATTCCTGCTGAAATTAGTAGTCGTGAAGCGAGACGAAAT
AGTAGAAGACTTTTTTGGGATTCTTTTTCAAGGAGAAGTCCTAGGAGGCGTGCTGATCCT
CGTAACTTTCGTTTTACAAATGATAATTCAGATGATATTGCTGCTCATGACAGGTTATTG
CTGGACTTTAGTGATAATTCCTTTCATGAGGGGTCTGGAGGAAATTTTCCATCAAATGGA
AGTCGGAATGAACGGCGACGGCATTCCAGATCTGAGATGTGGGAAAGACTTCCTGCTGGT
CTTATTGCTAGTGATCATCGAAGTGTCACTTGTCCAAGTGGGATTCACACAGATGGCCCA
TGTACATGTGAGACAATTTTAATGAGTCGAGAATCTGGCAGTCGTGCAAGTATATCCCGA
ATAGTTATGCTTGCTGAGGCATTGTTTGAGGTACTGGATGAAATACATCGTCAACCTATG
TCGTTGTCCTTATCTGTGCTATCACTTCCAGCTCCAGAGTCAGTTGTGGACTCATTCCCA
GTGAAGAGTTTCTCAAAACCAGTGGAAGTAGATACTAGCAACAATGTTTTACATGTATGT
CCACTTTGCAGAGGAGATGTACGAAATGCTTTTGTTGACAGTTCAGTTTCTAACTCAGCT
GCACTTCCTCTTTGTTTTTTTTTTCATTTTCGACTTTGCCCCCATACAATTTTGTGGAGA
GCTTGTACAGATGTATATGGCAGCTTTCGCTCCACAATGTACCCTTGTTGTTGCTGTTGA

Peptide Sequence

PEP ID

Solyc07g007200.3.1
PEP Infomation

Ring finger protein, putative (AHRD V3.3 *** B9T2M9_RICCO)
Sequence

MEEDPAEMLVDSAEHADTGKLQNSEKDPSPDFIPSLAERGASSASNLVNSEKSTSEDAST
NVQGGNRRENSTKDMELVTQYNSGRKHGETASTSQDDRSFRYPLSLNRRAEDDAVNNVAT
TVNVDVSQVFAGYSHSSSPLSHGNGESSSSEDFVANHTNEILIFNNSDSVSVLSDSSVTP
HLAGDDMRQDTPPSGFEFLVSDREEGVRDGSALHVDMANASPTFFSNIPAEISSREARRN
SRRLFWDSFSRRSPRRRADPRNFRFTNDNSDDIAAHDRLLLDFSDNSFHEGSGGNFPSNG
SRNERRRHSRSEMWERLPAGLIASDHRSVTCPSGIHTDGPCTCETILMSRESGSRASISR
IVMLAEALFEVLDEIHRQPMSLSLSVLSLPAPESVVDSFPVKSFSKPVEVDTSNNVLHVC
PLCRGDVRNAFVDSSVSNSAALPLCFFFHFRLCPHTILWRACTDVYGSFRSTMYPCCCC*

Transcript Sequence

Transcript ID

Solyc07g007200.3.1
Transcript Infomation

Ring finger protein, putative (AHRD V3.3 *** B9T2M9_RICCO)
Sequence

AAAAAAACATGTAAAAAATAAAAATGGATTCTAGATTTTGAAGAACTTGAAAATGGGAGA
GTGACATTCCAACCTACAAAATAGAAGAAAGACCTCCATTACACTTTCACCCTCCACCCC
TCCATTTCTCTTTCTTGCAAGAGGAAAAAGGAGTTGTTGATTTCAAAAAATCAAAATGGG
TTCTGGGAGTAGTCGTTTGGGGTCACGCTCAAGTCGTTCAAATCGAACAAAAAGATTATT
TGCATCCATTTTTATATGTGGTGCTTCTCCATCTTCTCGTCGTTCAGCTCTTGAGTTATC
TAGATTGTGGGAGAGTAGAGACTTCGGTGCTGAATTATCTTATGTGAGTGGGAGGCTCTG
TTTCTTATAGGTATGTTTGGGTGAATTCACTTAAATTTCCATGTCTTACTCTAAGGCCGT
CAGGAAAATTCTTGATTATATGTAAAATTGTGGTATTTCTTGGTTTATTTTTCACATGTA
TTGTCTGTACTATGTTAGATATCCTACGAATTTAGGTTGATTTTTGTTATTTACTAACTG
TGTCCTTCAAGTATTTATTTTATGCTCTTTTCTATCTTGAAAGAAGTGTTTAATCTAGTA
ACAGGCTGATATTTTTGGTCTTGTACTCTCATAAACTGTCTCTTAAGCTATGTACTAATA
TCTTCAACAAGACGTTTGACGTAGAGTCAGTACTTTAGGTGCTTAAATTCAATCCATATT
TTGTATTTGTTACTCTATAGATGGAAGAAGATCCAGCTGAAATGCTGGTGGATTCTGCAG
AACATGCTGACACAGGAAAGCTCCAAAACTCTGAGAAGGACCCTTCACCTGATTTTATTC
CCTCCCTAGCTGAACGTGGAGCTTCATCTGCAAGCAATCTGGTAAATAGTGAAAAATCTA
CATCTGAAGACGCTTCAACCAATGTTCAGGGAGGTAATCGAAGAGAAAACTCAACCAAAG
ACATGGAATTAGTCACTCAATATAATTCTGGACGTAAACATGGTGAAACTGCTAGTACAT
CTCAGGATGACCGATCATTTCGCTATCCACTTTCTTTAAACAGAAGGGCAGAGGATGATG
CTGTAAATAATGTCGCCACTACAGTGAATGTAGATGTCTCTCAAGTTTTTGCCGGTTACT
CTCATTCTAGCAGTCCATTGTCTCATGGAAATGGAGAGTCTTCATCAAGTGAAGATTTTG
TTGCAAACCACACAAATGAAATTCTTATCTTCAATAATTCTGATTCTGTATCAGTTCTTT
CGGATTCTTCAGTTACGCCACATTTGGCGGGAGATGATATGCGTCAGGATACACCACCTT
CAGGTTTTGAATTTCTGGTGTCAGACAGGGAAGAGGGTGTAAGAGATGGAAGTGCACTTC
ATGTTGACATGGCAAATGCCTCTCCCACTTTTTTCTCTAATATTCCTGCTGAAATTAGTA
GTCGTGAAGCGAGACGAAATAGTAGAAGACTTTTTTGGGATTCTTTTTCAAGGAGAAGTC
CTAGGAGGCGTGCTGATCCTCGTAACTTTCGTTTTACAAATGATAATTCAGATGATATTG
CTGCTCATGACAGGTTATTGCTGGACTTTAGTGATAATTCCTTTCATGAGGGGTCTGGAG
GAAATTTTCCATCAAATGGAAGTCGGAATGAACGGCGACGGCATTCCAGATCTGAGATGT
GGGAAAGACTTCCTGCTGGTCTTATTGCTAGTGATCATCGAAGTGTCACTTGTCCAAGTG
GGATTCACACAGATGGCCCATGTACATGTGAGACAATTTTAATGAGTCGAGAATCTGGCA
GTCGTGCAAGTATATCCCGAATAGTTATGCTTGCTGAGGCATTGTTTGAGGTACTGGATG
AAATACATCGTCAACCTATGTCGTTGTCCTTATCTGTGCTATCACTTCCAGCTCCAGAGT
CAGTTGTGGACTCATTCCCAGTGAAGAGTTTCTCAAAACCAGTGGAAGTAGATACTAGCA
ACAATGTTTTACATGTATGTCCACTTTGCAGAGGAGATGTACGAAATGCTTTTGTTGACA
GTTCAGTTTCTAACTCAGCTGCACTTCCTCTTTGTTTTTTTTTTCATTTTCGACTTTGCC
CCCATACAATTTTGTGGAGAGCTTGTACAGATGTATATGGCAGCTTTCGCTCCACAATGT
ACCCTTGTTGTTGCTGTTGATGTCAAGAAGGCACATTTTAATGTTCATTGAGGGAAAAAT
TACAAATGCAGATGCCACTAACTTGGTGGTGGCCTTAGGAAATAGGTGAATTTTCATATG
GATTCTCATTAGATATATATGAAATAGGGAATGTTCCAAATCTATTTCTATAATTATTTA
GTGGAAACTTTCATAGCAAAGATCTGGCTTGTCTGTCTTGCCTGCAATTAAAAT