Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g006900.2.1
CDS Infomation

SlPIN2
Sequence

ATGATTAATGGCAAAGACATATATGATGTTCTTGCTGCAATTATACCATTATATGTTGCG
ATGATATTAGCTTATGGTTCTGTTCGATGGTGGAAGATCTTCACCCCCGATCAATGTTCT
GGAATCAATCGATTCGTGGCAGTTTTCGCTGTTCCTCTGCTCGGTTTCCATTTCATATCC
ACGAACGATCCTTACGCGATGAATTACCATTTCATCGCTGCTGATTCCCTTCAAAAAGTT
GTTATACTTTTCGCGCTTTTCATCTGGCATCTTTTCAGCAAAAGAGGAAATTTAGAATGG
GTGATTACTCTGTTTTCTCTTTCGACTTTGCCCAACACTCTAGTTATGGGGATCCCTCTG
CTTAAAGCAATGTACGGAGATTTTTCTGGGAATCTAATGGTACAAATTGTCGTTATGCAA
AGTGTGATTTGGTATACACTTATGCTTTTTCTGTTCGAATACAGAGGAGCTAAGTTACTG
ATCGGTGAGCAATTCCCCGAAACTGCAGCTTCGATTACTTCGTTCAGAGTTGAATCTGAT
GTTGTTTCACTCAATGGACGTGAACCATTACAGGCCGATGCTGAAATCGGAGACGATGGA
AAATTACATGTTATAGTTCGAAGATCCTCTGCTTCTTCAATTATTTCATCTTATAATAAA
GGGATACTGCAATCGAATAACATGACTCCGCGAGCTTCGAACTTGACTGGTGTTGAGATT
TATTCTGTGCAATCGTCTCGAGAGCCAACGCCAAGAGCGTCTAGTTTTAATCAGACAGAT
TTTTACGCCATGTTTGCTAGTAAAACAGCTAGTCCGAAGCATGGGTATACGAATAGCTAT
GGTGGAGATGTGTTTTCTCTGCAGTCATCTAAAGGGCCAACACCGCGAACTTCTAATTTT
GAAGAGGAGATGTCGAAGATTGGAAGTAATAAGAAGAATCGAGGAGGTAGGAGTATGAGC
GGAGAGCTATATAATAGTAGTAGCACTGCTTCTACTAATGGATTGGTGTATCCACCTCCG
AATCCAATGTTTGTAGGGCAAAGGAAAAAGGAAGTTGGAAGCGGAAGTGGTGTACCAACG
CCAGTGCCAGTGCCAGTACCAGTACCAGTATCAATGTCGAATAGTAATAGTAATAGCAAT
AGTAAAGAGCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCTCCTACATCCGAAGGTAAT
CATAAGCACGCGATTAGCAAAGGTGGTTCAAGTGAACTTGGAGTTCTTGATGCATCCAAA
GCCGTTCTTCAACAAGAGATAGCTGCAGCAAGAGAGAATGCAAGTTCGGTTAGTAAAGGA
AATGTAGACAAAGAAATAGAGATCGAGGATGGATCGAAGAATATAGAAGATGGAGAGAAG
AAATCACAAATGCCTCCGGCTAGTGTTATGACAAGGCTAATCCTTATAATGGTATGGAGG
AAGTTGATAAGAAATCCAAACACCTATGCAAGTTTGATCGGACTCATTTGGTCTCTCATC
TCGTACAGATGGAATATTCAAATGCCTTCAATTGTGAAAGGCTCGATCTCAATTCTATCA
GATGCTGGTCTCGGAATGGCTATGTTCAGTCTAGGTTTATTCATGGCTTTACAACCAAAG
ATCATAGCTTGTGGAAAATCTGTTGCTACATTCTCCATGGCAGTTAGGTTTTTAACAGGA
CCAGCTGTTATTGCTGCTACTTCTATCGCGATTGGTCTTCGCGGTGTATTACTACATGTT
GCTATCGTTCAGGCTGCTTTGCCCCAAGGCATTGTTCCGTTTGTGTTTGCAAAAGAATAC
AATCTCCATCCTGATATCCTTAGTACCGCGGTTATATTTGGAATGCTAGTTGCTTTACCA
ATTACAATATTATATTATGTGCTTCTTGGTGTGTAG

Peptide Sequence

PEP ID

Solyc07g006900.2.1
PEP Infomation

SlPIN2
Sequence

MINGKDIYDVLAAIIPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLGFHFIS
TNDPYAMNYHFIAADSLQKVVILFALFIWHLFSKRGNLEWVITLFSLSTLPNTLVMGIPL
LKAMYGDFSGNLMVQIVVMQSVIWYTLMLFLFEYRGAKLLIGEQFPETAASITSFRVESD
VVSLNGREPLQADAEIGDDGKLHVIVRRSSASSIISSYNKGILQSNNMTPRASNLTGVEI
YSVQSSREPTPRASSFNQTDFYAMFASKTASPKHGYTNSYGGDVFSLQSSKGPTPRTSNF
EEEMSKIGSNKKNRGGRSMSGELYNSSSTASTNGLVYPPPNPMFVGQRKKEVGSGSGVPT
PVPVPVPVPVSMSNSNSNSNSKELHMFVWSSSASPTSEGNHKHAISKGGSSELGVLDASK
AVLQQEIAAARENASSVSKGNVDKEIEIEDGSKNIEDGEKKSQMPPASVMTRLILIMVWR
KLIRNPNTYASLIGLIWSLISYRWNIQMPSIVKGSISILSDAGLGMAMFSLGLFMALQPK
IIACGKSVATFSMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEY
NLHPDILSTAVIFGMLVALPITILYYVLLGV*

Transcript Sequence

Transcript ID

Solyc07g006900.2.1
Transcript Infomation

SlPIN2
Sequence

ACTAAAAGAAAAATTTACTTTTAACATTTATATTTTTATTCAAAATAATTTCGATTCTCG
AAATTCGAAATATATGTAATATATAAAATGGAAAGAAGTAGTAATACATTTCATCATCTT
TGTTAGTTAGTTTTACTTTCATTCAAATTCTCTCTGTTCTTCCTCTGTTTTTGCTTTTTA
CTCAAACACAGCCATGATTAATGGCAAAGACATATATGATGTTCTTGCTGCAATTATACC
ATTATATGTTGCGATGATATTAGCTTATGGTTCTGTTCGATGGTGGAAGATCTTCACCCC
CGATCAATGTTCTGGAATCAATCGATTCGTGGCAGTTTTCGCTGTTCCTCTGCTCGGTTT
CCATTTCATATCCACGAACGATCCTTACGCGATGAATTACCATTTCATCGCTGCTGATTC
CCTTCAAAAAGTTGTTATACTTTTCGCGCTTTTCATCTGGCATCTTTTCAGCAAAAGAGG
AAATTTAGAATGGGTGATTACTCTGTTTTCTCTTTCGACTTTGCCCAACACTCTAGTTAT
GGGGATCCCTCTGCTTAAAGCAATGTACGGAGATTTTTCTGGGAATCTAATGGTACAAAT
TGTCGTTATGCAAAGTGTGATTTGGTATACACTTATGCTTTTTCTGTTCGAATACAGAGG
AGCTAAGTTACTGATCGGTGAGCAATTCCCCGAAACTGCAGCTTCGATTACTTCGTTCAG
AGTTGAATCTGATGTTGTTTCACTCAATGGACGTGAACCATTACAGGCCGATGCTGAAAT
CGGAGACGATGGAAAATTACATGTTATAGTTCGAAGATCCTCTGCTTCTTCAATTATTTC
ATCTTATAATAAAGGGATACTGCAATCGAATAACATGACTCCGCGAGCTTCGAACTTGAC
TGGTGTTGAGATTTATTCTGTGCAATCGTCTCGAGAGCCAACGCCAAGAGCGTCTAGTTT
TAATCAGACAGATTTTTACGCCATGTTTGCTAGTAAAACAGCTAGTCCGAAGCATGGGTA
TACGAATAGCTATGGTGGAGATGTGTTTTCTCTGCAGTCATCTAAAGGGCCAACACCGCG
AACTTCTAATTTTGAAGAGGAGATGTCGAAGATTGGAAGTAATAAGAAGAATCGAGGAGG
TAGGAGTATGAGCGGAGAGCTATATAATAGTAGTAGCACTGCTTCTACTAATGGATTGGT
GTATCCACCTCCGAATCCAATGTTTGTAGGGCAAAGGAAAAAGGAAGTTGGAAGCGGAAG
TGGTGTACCAACGCCAGTGCCAGTGCCAGTACCAGTACCAGTATCAATGTCGAATAGTAA
TAGTAATAGCAATAGTAAAGAGCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCTCCTAC
ATCCGAAGGTAATCATAAGCACGCGATTAGCAAAGGTGGTTCAAGTGAACTTGGAGTTCT
TGATGCATCCAAAGCCGTTCTTCAACAAGAGATAGCTGCAGCAAGAGAGAATGCAAGTTC
GGTTAGTAAAGGAAATGTAGACAAAGAAATAGAGATCGAGGATGGATCGAAGAATATAGA
AGATGGAGAGAAGAAATCACAAATGCCTCCGGCTAGTGTTATGACAAGGCTAATCCTTAT
AATGGTATGGAGGAAGTTGATAAGAAATCCAAACACCTATGCAAGTTTGATCGGACTCAT
TTGGTCTCTCATCTCGTACAGATGGAATATTCAAATGCCTTCAATTGTGAAAGGCTCGAT
CTCAATTCTATCAGATGCTGGTCTCGGAATGGCTATGTTCAGTCTAGGTTTATTCATGGC
TTTACAACCAAAGATCATAGCTTGTGGAAAATCTGTTGCTACATTCTCCATGGCAGTTAG
GTTTTTAACAGGACCAGCTGTTATTGCTGCTACTTCTATCGCGATTGGTCTTCGCGGTGT
ATTACTACATGTTGCTATCGTTCAGGCTGCTTTGCCCCAAGGCATTGTTCCGTTTGTGTT
TGCAAAAGAATACAATCTCCATCCTGATATCCTTAGTACCGCGGTTATATTTGGAATGCT
AGTTGCTTTACCAATTACAATATTATATTATGTGCTTCTTGGTGTGTAGACTTGGGGCAT
GGGGAATAGAGAGAGATAAGTTCAATGGATTCAACAATATGGAAATTACCATGTGCTCCC
TACCATGTGACTATTTAATTAATATTATTATACAAAAAAAAAATGCAT