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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g006520.3.1
CDS Infomation

Preprotein translocase subunit SECY, chloroplastic (AHRD V3.3 *** A0A0B2PHE6_GLYSO)
Sequence

ATGTTGATAACAGTCAGAGAAATTTCTTCTTCTTCTCTGTGCTTCAATTCCAAGCAGCTA
CACTCTTTAAAGGTTAATAGAGTCACCCCAATTTGTAAAGCCAGCAGCCTCAGTTTCCAT
AAAAAATCCACTGCCCCATCATGGAATCTTGGTCTTTTTGAATCCACAAACAGCTGTGAT
AATTCAGTATTTGATCCATTGGGTACCAATTCAGGTAAATCATCCTGGGATAATTTAGTG
AGCTTGCTCTCTCAGACATTTGAAAGCTCCTCAAACACTAGAAAAGAGAAAAATTCATCA
GCTAGAGGGTTGGCAGCTGCAATTGAAGATACTAGCATTGATTTTGGAGACTTCTTCAAA
GGCCCGTTACCGGGAAAGTTTCTAAAGCTATTAGGCTTTTTGGCTTTGTCACGACTCGGG
ATCTATATACCGCTCGGTGGAGTAAATCGGGAGGCCTTTGTTGGCAATTTAGATGAGAAT
AGTATTTTAAGTACTTTGGATTCCTTTTCCGGTGGAGGTATAGGTCGCCTTGGAATATGC
TCCCTAGGTATTGTTCCCTTCATTAATGCACAAATTGTGTTTCAACTTCTTGCTCAAATC
TACCCCAAGTTGCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGAAGAAAGAAAGTTCTC
CAGTATACTCGCTATGCTTCTGTTGGATTTGCCGTAGTACAGGCAATTGGCCAAGTATTG
TTCCTTCGCCCTTATGTTAATGACTTCAGTACCCAGTGGGCAATTTCTTCCGTTGTACTT
TTGACCCTCGGCTCAGTATTTACGACTTATATTGGGGAGCGAATCACTGATTTAAAACTT
GGAAATGGTACATCTCTTTTGATCTTTACAAATATCATCTCCTACTTGCCAGCGTCCTTT
GGTAGGACAGTCGCGCAGGCCTATCAAGATGGTAATTATGTTGGGCTCGTTGGCATCCTA
GTCTCGTTCTTCCTGCTAGTCCTTAGCATTGTATATGTTCAGGAAGCAGAGAGGAAAATT
CCGCTAAATTATGCATCAAGGTATACTGGCAGAACAGGAGGAGGACTTCAAAAATCTGCA
TACTTACCATTTAAAGTGAACAGTTCAGGAGTAATGCCGATTATTTTCTCTACATCATCA
CTAGCCCTTCCTGGCACTTTGGCACGTTTCACCGGTGTAGGTTTTCTGAGAAACGCTGCA
GCAGGTTTAAACCCTGGAGGTTCTTTCTATCTGCCGACAAACATTTTGTTGATTGCCTTC
TTCAATTACTATTATACATTCCTGCAATTGGACCCTGACGATGTCAGTGATCAGTTGAAA
CGACAAGGTGCCTCAATCCCACTTGTTCGACCGGGTAAAAGCACAGCGGCATTCATCAAA
ACGGTACTCAGCCGGATATCAGTTCTTGGTTCAGCATTTTTGGCACTTCTCGCTGCTGGC
CCTGCTGTGATTGAACAAGCCACACACCTCACTGCTTTCCGAGGCTTTGCAGGCACGTCA
GTGCTTATTCTTGTTGGTTGTGCTACAGACACTGCAAGGAAAGTACAAGCGGAGATCATA
TCCCAAAAGTACAAGAATATTGAGTTTTACGACATTGATAATAAATATTGA

Peptide Sequence

PEP ID

Solyc07g006520.3.1
PEP Infomation

Preprotein translocase subunit SECY, chloroplastic (AHRD V3.3 *** A0A0B2PHE6_GLYSO)
Sequence

MLITVREISSSSLCFNSKQLHSLKVNRVTPICKASSLSFHKKSTAPSWNLGLFESTNSCD
NSVFDPLGTNSGKSSWDNLVSLLSQTFESSSNTRKEKNSSARGLAAAIEDTSIDFGDFFK
GPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDENSILSTLDSFSGGGIGRLGIC
SLGIVPFINAQIVFQLLAQIYPKLQELQKREGEAGRKKVLQYTRYASVGFAVVQAIGQVL
FLRPYVNDFSTQWAISSVVLLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASF
GRTVAQAYQDGNYVGLVGILVSFFLLVLSIVYVQEAERKIPLNYASRYTGRTGGGLQKSA
YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGVGFLRNAAAGLNPGGSFYLPTNILLIAF
FNYYYTFLQLDPDDVSDQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLALLAAG
PAVIEQATHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDNKY*

Transcript Sequence

Transcript ID

Solyc07g006520.3.1
Transcript Infomation

Preprotein translocase subunit SECY, chloroplastic (AHRD V3.3 *** A0A0B2PHE6_GLYSO)
Sequence

AGTTCAAGAATAATGTAATTCATAAATAAAATTTCAAGATAAAAATTGAAGAGTGTGTGT
CTGTGTGAGAGGATAATGTTGATAACAGTCAGAGAAATTTCTTCTTCTTCTCTGTGCTTC
AATTCCAAGCAGCTACACTCTTTAAAGGTTAATAGAGTCACCCCAATTTGTAAAGCCAGC
AGCCTCAGTTTCCATAAAAAATCCACTGCCCCATCATGGAATCTTGGTCTTTTTGAATCC
ACAAACAGCTGTGATAATTCAGTATTTGATCCATTGGGTACCAATTCAGGTAAATCATCC
TGGGATAATTTAGTGAGCTTGCTCTCTCAGACATTTGAAAGCTCCTCAAACACTAGAAAA
GAGAAAAATTCATCAGCTAGAGGGTTGGCAGCTGCAATTGAAGATACTAGCATTGATTTT
GGAGACTTCTTCAAAGGCCCGTTACCGGGAAAGTTTCTAAAGCTATTAGGCTTTTTGGCT
TTGTCACGACTCGGGATCTATATACCGCTCGGTGGAGTAAATCGGGAGGCCTTTGTTGGC
AATTTAGATGAGAATAGTATTTTAAGTACTTTGGATTCCTTTTCCGGTGGAGGTATAGGT
CGCCTTGGAATATGCTCCCTAGGTATTGTTCCCTTCATTAATGCACAAATTGTGTTTCAA
CTTCTTGCTCAAATCTACCCCAAGTTGCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGA
AGAAAGAAAGTTCTCCAGTATACTCGCTATGCTTCTGTTGGATTTGCCGTAGTACAGGCA
ATTGGCCAAGTATTGTTCCTTCGCCCTTATGTTAATGACTTCAGTACCCAGTGGGCAATT
TCTTCCGTTGTACTTTTGACCCTCGGCTCAGTATTTACGACTTATATTGGGGAGCGAATC
ACTGATTTAAAACTTGGAAATGGTACATCTCTTTTGATCTTTACAAATATCATCTCCTAC
TTGCCAGCGTCCTTTGGTAGGACAGTCGCGCAGGCCTATCAAGATGGTAATTATGTTGGG
CTCGTTGGCATCCTAGTCTCGTTCTTCCTGCTAGTCCTTAGCATTGTATATGTTCAGGAA
GCAGAGAGGAAAATTCCGCTAAATTATGCATCAAGGTATACTGGCAGAACAGGAGGAGGA
CTTCAAAAATCTGCATACTTACCATTTAAAGTGAACAGTTCAGGAGTAATGCCGATTATT
TTCTCTACATCATCACTAGCCCTTCCTGGCACTTTGGCACGTTTCACCGGTGTAGGTTTT
CTGAGAAACGCTGCAGCAGGTTTAAACCCTGGAGGTTCTTTCTATCTGCCGACAAACATT
TTGTTGATTGCCTTCTTCAATTACTATTATACATTCCTGCAATTGGACCCTGACGATGTC
AGTGATCAGTTGAAACGACAAGGTGCCTCAATCCCACTTGTTCGACCGGGTAAAAGCACA
GCGGCATTCATCAAAACGGTACTCAGCCGGATATCAGTTCTTGGTTCAGCATTTTTGGCA
CTTCTCGCTGCTGGCCCTGCTGTGATTGAACAAGCCACACACCTCACTGCTTTCCGAGGC
TTTGCAGGCACGTCAGTGCTTATTCTTGTTGGTTGTGCTACAGACACTGCAAGGAAAGTA
CAAGCGGAGATCATATCCCAAAAGTACAAGAATATTGAGTTTTACGACATTGATAATAAA
TATTGAAACAAGACTTCTGGTTAAAGCTGGAGAAATGAGATTGTATTACATAAAAGAGAA
CATAAACGCCACGACAAAAACTTGATCTGGACGTGAGAGACTCTACTGTCGACTCCCCCG
GCCCCCCTACTTTTCATAATCAATTTATCCTAGTTTCTCTGTAATACTAACTTAGATGTA
CATGTTTCTTAGATCTTTGTAACACACAACTGCCATCTTTTTTTGTGTTATTTGCTTTTA
TTCAATTTTCTGGAGTGTCTC