Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g006160.3.1
CDS Infomation

Lactation elevated protein 1 (AHRD V3.3 *** W9RT81_9ROSA)
Sequence

ATGAGGAAAGTTCTGCAGTCTGCGAGGCAAATCAAATCCGCTCTGCGGTATAGGAAGGAT
AATGTGATTAATAGTCTTGTAAAAAGACAATATTTTTCGACTAATATAAGTCATGGCTGT
ATATGCAAACTTTCTTATAATGGTGGTATTACTAGACATAGCCAACCATATTACATGTTG
TCCAGAGCCATGTTTGCCGGTGTAGCTACAGTTAGTAATGGAGTGGAGACCAGAGGCGGG
CCTCTAGTGGAATATGAACGAAGAATTGCTGAGGGTGACCTCTTGGATGGAGATGCATGT
CAGGTAGGCACATTGCAAGAGCTCCAAAGACTTTATGATCAGCTCATTGAAAAAGCTGAA
GTCTGCCGGTTAGACAAATATGCCTCTTCTGATAAAGCCAGCAGGAGTAGATGGTTATGG
TCCCGTCTCTTACCACAGTCGTCATATGCTCCTGTCAAAGGATTATATCTTTACGGGGGA
GTTGGGACAGGCAAAACTATGTTAATGGACCTGTTTTTCGACCAGTTGCCTGGCAATTGG
AGGAAAAAGAGAATCCATTTTCACGACTTCATGCTGAATGTTCACAGCCGATTACAGAAG
CACAAGGGTGTGCCAGATCCTCTAGAAGTTGTGGCAGGAGAGATATCGGACGAGGCCATT
TTGTTGTGTCTTGATGAATTTATGGTGACTGATGTGGCTGATGCACTGATACTGAATCGC
TTATTTAAGCAGTTATTTATGAACGGCGCAATTCTTGTTGCTACGTCAAACCGTGCTCCC
GATAACCTTTATGAACGTGGACTACAGAGGGATCTTTTCCTTCCTTTTATAGCTACTTTA
AAGGAAAGATGTGTGGTACGTGAAATTGGCTCAGCAGTGGACTACAGGAAGTTGACTTCG
GCCGAACAAGGGTTCTACTTTATCGGAAAAGATATATCAAGCGTCATTAAAAAGCAATTC
CAGATGCTAGTAGGGGATGCTCAACCAGTTCCGCAAGAGGTGGAAGTTGTCATGGGAAGG
AAATTGCAGGTTCCACTGGGTGCTAATGGATGTGCATTATTTTCATTTGAGGAACTCTGC
GACAGGCCTCTTGGTGCAGCAGACTATTTTGGACTATTTAAAAACTTCCATACGCTGGCT
CTGGATGGCGTACCGATTTTTGGGCTTCATAATAAAACTGCAGCATACCGTTTTGTGACG
TTGGTTGATGTAATGTATGAAAATAGAGCTAGACTTTTATGCACGGCTGAGGGATCTCCC
GTCGAACTTTTTGAAAAGATCGTGACAATATCCGATGCCCAACAAATAGCACCTAGAACA
TCTTCAAGGTCAAGGAAGAACGATGATTTTGACCTTTGTGTGGACAACGAGTTGGGTTTT
GCAAAAGATCGCACCATTAGTAGGTTGACAGAGATGAACAGCAGAGAGTACTTAGAACAA
CATGCTGAAATGTTAGCCAAGAAGCTGCAACTTCCGTCGGAAAATCACGGCGAGAAGGCA
ATAGAGGTGTAG

Peptide Sequence

PEP ID

Solyc07g006160.3.1
PEP Infomation

Lactation elevated protein 1 (AHRD V3.3 *** W9RT81_9ROSA)
Sequence

MRKVLQSARQIKSALRYRKDNVINSLVKRQYFSTNISHGCICKLSYNGGITRHSQPYYML
SRAMFAGVATVSNGVETRGGPLVEYERRIAEGDLLDGDACQVGTLQELQRLYDQLIEKAE
VCRLDKYASSDKASRSRWLWSRLLPQSSYAPVKGLYLYGGVGTGKTMLMDLFFDQLPGNW
RKKRIHFHDFMLNVHSRLQKHKGVPDPLEVVAGEISDEAILLCLDEFMVTDVADALILNR
LFKQLFMNGAILVATSNRAPDNLYERGLQRDLFLPFIATLKERCVVREIGSAVDYRKLTS
AEQGFYFIGKDISSVIKKQFQMLVGDAQPVPQEVEVVMGRKLQVPLGANGCALFSFEELC
DRPLGAADYFGLFKNFHTLALDGVPIFGLHNKTAAYRFVTLVDVMYENRARLLCTAEGSP
VELFEKIVTISDAQQIAPRTSSRSRKNDDFDLCVDNELGFAKDRTISRLTEMNSREYLEQ
HAEMLAKKLQLPSENHGEKAIEV*

Transcript Sequence

Transcript ID

Solyc07g006160.3.1
Transcript Infomation

Lactation elevated protein 1 (AHRD V3.3 *** W9RT81_9ROSA)
Sequence

AAATAAGATCGAGTACAATTAAAAATAATTAAACTTCAACCAATTATATAAAATTATTAC
AAAGTAAATAAACACAAATTAAATGACAATTAATAATTGATTAATTATACCCTAAAATAA
AAAAAGAAGAAAAAGACTCATATGGTGATGTTTAAGTGACTCATCTTCTATAATGCACCA
TGCCAAAATACGTGTCAGTAAAGTCTCTAAAACTACCAAAAATACCCTTAAGTAATCCCA
ATATTTACACTTATTCCTATTCATTATCCAAGTCAACCAAGGACAACATTGTCATTTTAC
GAAATCCACCATTGATGAAACAAAAGTCCAAAACCTGTAAAGATTAGAAAAACTATGAAA
AGCTCATAAAATATTGGAGTTCTTTTGATTCTTTACCCCCATACCCCCCCTAATGCACCT
CACCTACCCCCACATGCTGTAAAAAGCCCATACCCTGATACCCTTTTGAAGGTTTGTTCT
TTTTCTTTCCTCTTTCTTGTTTATTTTTTTGGTTTTTGTAGTTGATTTTGTTGTTTTTCC
CTAGGAAATTCCAGAAAAATAGGGTCTTGAAAAACTTATTATAAAAAAGAACTTAGATTA
GACACCAAAATAGGAATTATAACTTTTTTCTTAAATCTCATTCTATCTGTTAAAATTCCA
TAAATATTGGTTCTTGAAAAACTCTCTGTTTTCCCACTTTCTTTTGGACTTTGTGTGAAA
AAAGATAAAAACTTTGACACCCAGGAAAGAAAGATAAGTTCTTTATCTTGTTTATCCCAG
TTTATCTGTGAAAATTCAGACAGATAGAGAGAGAGTGTGTGTGAGAGAGAGAGGAGATTC
AGAAATCAGCATGCAGTTGTGTGTGGTTGTGGTGTGATTCTTTATTGTTTCAAGAACAGA
TTTTTATCTTACCTTTTTGTTGAAGATCAGCTCTTTTGGAATTGTGGGTTTTGGCTCTAT
TAGCATATTAAGAATCTGGTGTTTATTCAAGGAACTTGTCTGAGACTACTCTTAAAGAAA
TTAGGGAGGACTAAATTTGTAGTCTTTCCTGGAAATTTGGAATTCAACATGAGGAAAGTT
CTGCAGTCTGCGAGGCAAATCAAATCCGCTCTGCGGTATAGGAAGGATAATGTGATTAAT
AGTCTTGTAAAAAGACAATATTTTTCGACTAATATAAGTCATGGCTGTATATGCAAACTT
TCTTATAATGGTGGTATTACTAGACATAGCCAACCATATTACATGTTGTCCAGAGCCATG
TTTGCCGGTGTAGCTACAGTTAGTAATGGAGTGGAGACCAGAGGCGGGCCTCTAGTGGAA
TATGAACGAAGAATTGCTGAGGGTGACCTCTTGGATGGAGATGCATGTCAGGTAGGCACA
TTGCAAGAGCTCCAAAGACTTTATGATCAGCTCATTGAAAAAGCTGAAGTCTGCCGGTTA
GACAAATATGCCTCTTCTGATAAAGCCAGCAGGAGTAGATGGTTATGGTCCCGTCTCTTA
CCACAGTCGTCATATGCTCCTGTCAAAGGATTATATCTTTACGGGGGAGTTGGGACAGGC
AAAACTATGTTAATGGACCTGTTTTTCGACCAGTTGCCTGGCAATTGGAGGAAAAAGAGA
ATCCATTTTCACGACTTCATGCTGAATGTTCACAGCCGATTACAGAAGCACAAGGGTGTG
CCAGATCCTCTAGAAGTTGTGGCAGGAGAGATATCGGACGAGGCCATTTTGTTGTGTCTT
GATGAATTTATGGTGACTGATGTGGCTGATGCACTGATACTGAATCGCTTATTTAAGCAG
TTATTTATGAACGGCGCAATTCTTGTTGCTACGTCAAACCGTGCTCCCGATAACCTTTAT
GAACGTGGACTACAGAGGGATCTTTTCCTTCCTTTTATAGCTACTTTAAAGGAAAGATGT
GTGGTACGTGAAATTGGCTCAGCAGTGGACTACAGGAAGTTGACTTCGGCCGAACAAGGG
TTCTACTTTATCGGAAAAGATATATCAAGCGTCATTAAAAAGCAATTCCAGATGCTAGTA
GGGGATGCTCAACCAGTTCCGCAAGAGGTGGAAGTTGTCATGGGAAGGAAATTGCAGGTT
CCACTGGGTGCTAATGGATGTGCATTATTTTCATTTGAGGAACTCTGCGACAGGCCTCTT
GGTGCAGCAGACTATTTTGGACTATTTAAAAACTTCCATACGCTGGCTCTGGATGGCGTA
CCGATTTTTGGGCTTCATAATAAAACTGCAGCATACCGTTTTGTGACGTTGGTTGATGTA
ATGTATGAAAATAGAGCTAGACTTTTATGCACGGCTGAGGGATCTCCCGTCGAACTTTTT
GAAAAGATCGTGACAATATCCGATGCCCAACAAATAGCACCTAGAACATCTTCAAGGTCA
AGGAAGAACGATGATTTTGACCTTTGTGTGGACAACGAGTTGGGTTTTGCAAAAGATCGC
ACCATTAGTAGGTTGACAGAGATGAACAGCAGAGAGTACTTAGAACAACATGCTGAAATG
TTAGCCAAGAAGCTGCAACTTCCGTCGGAAAATCACGGCGAGAAGGCAATAGAGGTGTAG
TTGATATAGGAATTCCATACATTTTCCCAATTCAAGGGGATCAATTCTTGTCTGTAAAAT
TGTGCAAAAATAACATATCATAAAAGAAGTGAGGTTGATTAAAGCTTTGGCTGGCAATGA
GATGCAGAAATGTGATATATATATGGTTTAGTTGATTAATAATGTGATTGTTTGTAATTA
CTGAGCTGATAATGACAACATCTTCAATAAGAATGGCATTTTATGAGCATTTCTGCTATT
GGAAATGTTTGCTGGTATACTCTTT